RNA–Protein interactions for RNA: ENST00000415620.1

LINC00428-201, long intergenic non-protein coding RNA 428, humanhuman

TSL 5 BASIC

Gene LINC00428, Length 227 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00428-201ENST00000415620 ATP6V1G1O75348 118 aa0.62□□□□□ -2.31
LINC00428-201ENST00000415620 SCGNO76038 276 aa0.62□□□□□ -2.31
LINC00428-201ENST00000415620 NCR2O95944 276 aa0.62□□□□□ -2.31
LINC00428-201ENST00000415620 SMIM17P0DL12 118 aa0.62□□□□□ -2.31
LINC00428-201ENST00000415620 UBE2L3P68036 154 aaKnown RBP0.62□□□□□ -2.31
LINC00428-201ENST00000415620 CD164Q04900 197 aa0.62□□□□□ -2.31
LINC00428-201ENST00000415620 KRTAP6-2Q3LI66 62 aa0.62□□□□□ -2.31
LINC00428-201ENST00000415620 TMEM136Q6ZRR5 245 aa0.62□□□□□ -2.31
LINC00428-201ENST00000415620 MRPL52Q86TS9 123 aaKnown RBP0.62□□□□□ -2.31
LINC00428-201ENST00000415620 ST20-AS1Q8NBB2 130 aa0.62□□□□□ -2.31
LINC00428-201ENST00000415620 CMTM2Q8TAZ6 248 aa0.62□□□□□ -2.31
LINC00428-201ENST00000415620 DYNC2LI1Q8TCX1 351 aa0.62□□□□□ -2.31
LINC00428-201ENST00000415620 GPX8Q8TED1 209 aa0.62□□□□□ -2.31
LINC00428-201ENST00000415620 MT1LQ93083 61 aa0.62□□□□□ -2.31
LINC00428-201ENST00000415620 RPL39LQ96EH5 51 aaKnown RBP0.62□□□□□ -2.31
LINC00428-201ENST00000415620 MRAP2Q96G30 205 aa0.62□□□□□ -2.31
LINC00428-201ENST00000415620 AP1S3Q96PC3 154 aa0.62□□□□□ -2.31
LINC00428-201ENST00000415620 Q9BRP9 147 aa0.62□□□□□ -2.31
LINC00428-201ENST00000415620 RNASE7Q9H1E1 156 aaKnown RBP0.62□□□□□ -2.31
LINC00428-201ENST00000415620 OTORQ9NRC9 128 aa0.62□□□□□ -2.31
LINC00428-201ENST00000415620 TXNL4BQ9NX01 149 aaKnown RBP0.62□□□□□ -2.31
LINC00428-201ENST00000415620 A0A087WSZ3 146 aa0.61□□□□□ -2.31
LINC00428-201ENST00000415620 GIPP09681 153 aaPredicted RBP0.61□□□□□ -2.31
LINC00428-201ENST00000415620 RAB3BP20337 219 aa0.61□□□□□ -2.31
LINC00428-201ENST00000415620 SPRR1AP35321 89 aa0.61□□□□□ -2.31
LINC00428-201ENST00000415620 RANBP1P43487 201 aa0.61□□□□□ -2.31
LINC00428-201ENST00000415620 AP3S2P59780 193 aa0.61□□□□□ -2.31
LINC00428-201ENST00000415620 CKS1BP61024 79 aa0.61□□□□□ -2.31
LINC00428-201ENST00000415620 FLI1Q01543 452 aaPredicted RBP0.61□□□□□ -2.31
LINC00428-201ENST00000415620 H1FX-AS1Q4G0G2 97 aa0.61□□□□□ -2.31
LINC00428-201ENST00000415620 SPANXN1Q5VSR9 72 aa0.61□□□□□ -2.31
LINC00428-201ENST00000415620 TMEM14EPQ6UXP3 125 aa0.61□□□□□ -2.31
LINC00428-201ENST00000415620 SPATA24Q86W54 205 aa0.61□□□□□ -2.31
LINC00428-201ENST00000415620 PSENENQ9NZ42 101 aa0.61□□□□□ -2.31
LINC00428-201ENST00000415620 TOMM7Q9P0U1 55 aa0.61□□□□□ -2.31
LINC00428-201ENST00000415620 UBE2L5PA0A1B0GUS4 154 aa0.6□□□□□ -2.31
LINC00428-201ENST00000415620 ETDCA0A1B0GVM5 59 aa0.6□□□□□ -2.31
LINC00428-201ENST00000415620 TCRBV3S1A0A5B6 114 aa0.6□□□□□ -2.31
LINC00428-201ENST00000415620 PDCD5O14737 125 aa0.6□□□□□ -2.31
LINC00428-201ENST00000415620 SSSCA1O60232 199 aa0.6□□□□□ -2.31
LINC00428-201ENST00000415620 PRDX6P30041 224 aa0.6□□□□□ -2.31
LINC00428-201ENST00000415620 SPINK7P58062 85 aa0.6□□□□□ -2.31
LINC00428-201ENST00000415620 RAB5BP61020 215 aa0.6□□□□□ -2.31
LINC00428-201ENST00000415620 GATD1Q8NB37 220 aa0.6□□□□□ -2.31
LINC00428-201ENST00000415620 PLAC4Q8WY50 150 aa0.6□□□□□ -2.31
LINC00428-201ENST00000415620 LSM2Q9Y333 95 aaKnown RBP0.6□□□□□ -2.31
LINC00428-201ENST00000415620 TRAV1-2A0A0B4J238 106 aa0.59□□□□□ -2.31
LINC00428-201ENST00000415620 A4D1N5 150 aa0.59□□□□□ -2.31
LINC00428-201ENST00000415620 SDHAF1A6NFY7 115 aa0.59□□□□□ -2.31
LINC00428-201ENST00000415620 F8VRH5 84 aa0.59□□□□□ -2.31
LINC00428-201ENST00000415620 I3L3M4 83 aa0.59□□□□□ -2.31
LINC00428-201ENST00000415620 SNAPINO95295 136 aa0.59□□□□□ -2.31
LINC00428-201ENST00000415620 CXCL1P09341 107 aa0.59□□□□□ -2.31
LINC00428-201ENST00000415620 SLC25A6P12236 298 aa0.59□□□□□ -2.31
LINC00428-201ENST00000415620 RAB14P61106 215 aa0.59□□□□□ -2.31
LINC00428-201ENST00000415620 BAXQ07812 192 aa0.59□□□□□ -2.31
LINC00428-201ENST00000415620 C6orf226Q5I0X4 101 aa0.59□□□□□ -2.31
LINC00428-201ENST00000415620 SPANXN2Q5MJ10 180 aa0.59□□□□□ -2.31
LINC00428-201ENST00000415620 FAM74A1Q5RGS3 127 aa0.59□□□□□ -2.31
LINC00428-201ENST00000415620 SAPCD1Q5SSQ6 148 aa0.59□□□□□ -2.31
LINC00428-201ENST00000415620 ALKAL2Q6UX46 152 aa0.59□□□□□ -2.31
LINC00428-201ENST00000415620 PRR15Q8IV56 129 aa0.59□□□□□ -2.31
LINC00428-201ENST00000415620 AP3S1Q92572 193 aa0.59□□□□□ -2.31
LINC00428-201ENST00000415620 TGIF2-C20orf24A0A0A6YYL0 155 aa0.58□□□□□ -2.32
LINC00428-201ENST00000415620 LOC100130705A0A1B0GUX0 176 aa0.58□□□□□ -2.32
LINC00428-201ENST00000415620 C7orf77A4D0Y5 90 aa0.58□□□□□ -2.32
LINC00428-201ENST00000415620 TCL1BO95988 128 aa0.58□□□□□ -2.32
LINC00428-201ENST00000415620 CD3DP04234 171 aa0.58□□□□□ -2.32
LINC00428-201ENST00000415620 PMCHP20382 165 aa0.58□□□□□ -2.32
LINC00428-201ENST00000415620 MYL9P24844 172 aa0.58□□□□□ -2.32
LINC00428-201ENST00000415620 KRTAP19-5Q3LI72 72 aa0.58□□□□□ -2.32
LINC00428-201ENST00000415620 SCGB2B2Q4G0G5 96 aa0.58□□□□□ -2.32
LINC00428-201ENST00000415620 DNAL1Q4LDG9 190 aa0.58□□□□□ -2.32
LINC00428-201ENST00000415620 SNX29P2Q8IUI4 249 aa0.58□□□□□ -2.32
LINC00428-201ENST00000415620 Q8IZM0 81 aa0.58□□□□□ -2.32
LINC00428-201ENST00000415620 TIMM21Q9BVV7 248 aa0.58□□□□□ -2.32
LINC00428-201ENST00000415620 C14orf166Q9Y224 244 aaKnown RBP0.58□□□□□ -2.32
LINC00428-201ENST00000415620 CSDC2Q9Y534 153 aaKnown RBP0.58□□□□□ -2.32
LINC00428-201ENST00000415620 ORC6Q9Y5N6 252 aa0.58□□□□□ -2.32
LINC00428-201ENST00000415620 SERTM2A0A1B0GWG4 89 aa0.57□□□□□ -2.32
LINC00428-201ENST00000415620 C7orf66A4D0T2 115 aa0.57□□□□□ -2.32
LINC00428-201ENST00000415620 FAM25EA8MYX2 175 aa0.57□□□□□ -2.32
LINC00428-201ENST00000415620 CALB2P22676 271 aa0.57□□□□□ -2.32
LINC00428-201ENST00000415620 ZNF345Q14585 488 aa0.57□□□□□ -2.32
LINC00428-201ENST00000415620 KRTAP6-1Q3LI64 71 aa0.57□□□□□ -2.32
LINC00428-201ENST00000415620 RNASE10Q5GAN6 216 aaKnown RBP0.57□□□□□ -2.32
LINC00428-201ENST00000415620 C1orf146Q5VVC0 180 aa0.57□□□□□ -2.32
LINC00428-201ENST00000415620 C22orf42Q6IC83 251 aa0.57□□□□□ -2.32
LINC00428-201ENST00000415620 Q6ZRX8 168 aa0.57□□□□□ -2.32
LINC00428-201ENST00000415620 C5orf17Q8NAS9 161 aa0.57□□□□□ -2.32
LINC00428-201ENST00000415620 SMIM8Q96KF7 97 aa0.57□□□□□ -2.32
LINC00428-201ENST00000415620 GGACTQ9BVM4 153 aa0.57□□□□□ -2.32
LINC00428-201ENST00000415620 NPCDR1Q9BY65 106 aa0.57□□□□□ -2.32
LINC00428-201ENST00000415620 PRO1933Q9H354 126 aa0.57□□□□□ -2.32
LINC00428-201ENST00000415620 C10orf95Q9H7T3 257 aa0.57□□□□□ -2.32
LINC00428-201ENST00000415620 SND1-IT1Q9HBX3 110 aa0.57□□□□□ -2.32
LINC00428-201ENST00000415620 TRAV9-1A0A075B6T8 112 aa0.56□□□□□ -2.32
LINC00428-201ENST00000415620 A0A1B0GWB2 263 aa0.56□□□□□ -2.32
LINC00428-201ENST00000415620 D6R8Y8 96 aa0.56□□□□□ -2.32
LINC00428-201ENST00000415620 HMGB3O15347 200 aaKnown RBP0.56□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms