RNA–Protein interactions for RNA: ENST00000415560.1

HMGA1P1-201, Transcript of high mobility group AT-hook 1 pseudogene 1, humanhuman

BASIC

Gene HMGA1P1, Length 1,062 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P1-201ENST00000415560 NTN5Q8WTR8 489 aaPredicted RBP9.47□□□□□ -0.89
HMGA1P1-201ENST00000415560 LINC00158P58513 81 aa9.46□□□□□ -0.9
HMGA1P1-201ENST00000415560 COX17Q14061 63 aa9.46□□□□□ -0.9
HMGA1P1-201ENST00000415560 C2orf82Q6UX34 121 aa9.46□□□□□ -0.9
HMGA1P1-201ENST00000415560 CEND1Q8N111 149 aa9.46□□□□□ -0.9
HMGA1P1-201ENST00000415560 CAMK2N2Q96S95 79 aa9.46□□□□□ -0.9
HMGA1P1-201ENST00000415560 SPANXDQ9BXN6 97 aa9.46□□□□□ -0.9
HMGA1P1-201ENST00000415560 KRTAP1-5Q9BYS1 174 aa9.46□□□□□ -0.9
HMGA1P1-201ENST00000415560 SPANXCQ9NY87 97 aa9.46□□□□□ -0.9
HMGA1P1-201ENST00000415560 GVQW2A0A096LPI5 108 aaPredicted RBP9.45□□□□□ -0.9
HMGA1P1-201ENST00000415560 IFITM1P13164 125 aa9.45□□□□□ -0.9
HMGA1P1-201ENST00000415560 PTTG1IPP53801 180 aa9.45□□□□□ -0.9
HMGA1P1-201ENST00000415560 BATFQ16520 125 aa9.45□□□□□ -0.9
HMGA1P1-201ENST00000415560 HIGD2BQ4VC39 106 aa9.45□□□□□ -0.9
HMGA1P1-201ENST00000415560 C14orf177Q52M58 125 aa9.45□□□□□ -0.9
HMGA1P1-201ENST00000415560 C15orf56Q8N910 161 aa9.45□□□□□ -0.9
HMGA1P1-201ENST00000415560 LINC00476Q8WZB0 136 aa9.45□□□□□ -0.9
HMGA1P1-201ENST00000415560 ERG28Q9UKR5 140 aa9.45□□□□□ -0.9
HMGA1P1-201ENST00000415560 TMEM238LA0A1B0GVL6 79 aa9.44□□□□□ -0.9
HMGA1P1-201ENST00000415560 A6NJY4 79 aa9.44□□□□□ -0.9
HMGA1P1-201ENST00000415560 USP17L23D6RBM5 183 aa9.44□□□□□ -0.9
HMGA1P1-201ENST00000415560 M0R2N4 97 aa9.44□□□□□ -0.9
HMGA1P1-201ENST00000415560 SMIM13P0DJ93 91 aa9.44□□□□□ -0.9
HMGA1P1-201ENST00000415560 BVES-AS1Q5T3Y7 98 aa9.44□□□□□ -0.9
HMGA1P1-201ENST00000415560 TRBV30A0A0K0K1B3 111 aa9.43□□□□□ -0.9
HMGA1P1-201ENST00000415560 A6NDN8 102 aa9.43□□□□□ -0.9
HMGA1P1-201ENST00000415560 PFN2P35080 140 aa9.43□□□□□ -0.9
HMGA1P1-201ENST00000415560 RPL24P83731 157 aaKnown RBP9.43□□□□□ -0.9
HMGA1P1-201ENST00000415560 UNQ6190/PRO20217Q6UXQ8 127 aa9.43□□□□□ -0.9
HMGA1P1-201ENST00000415560 C6orf223Q8N319 242 aa9.43□□□□□ -0.9
HMGA1P1-201ENST00000415560 DNAH7Q8WXX0 4024 aa9.42□□□□□ -0.9
HMGA1P1-201ENST00000415560 A0A0U1RRA0 63 aa9.42□□□□□ -0.9
HMGA1P1-201ENST00000415560 ADAMTSL4-AS1Q5T5F5 129 aa9.42□□□□□ -0.9
HMGA1P1-201ENST00000415560 MUSTN1Q8IVN3 82 aa9.42□□□□□ -0.9
HMGA1P1-201ENST00000415560 LINC00526Q96FQ7 95 aa9.42□□□□□ -0.9
HMGA1P1-201ENST00000415560 LITAFQ99732 161 aa9.42□□□□□ -0.9
HMGA1P1-201ENST00000415560 SNHG12Q9BXW3 62 aa9.42□□□□□ -0.9
HMGA1P1-201ENST00000415560 SYCNQ0VAF6 134 aa9.41□□□□□ -0.9
HMGA1P1-201ENST00000415560 LBHQ53QV2 105 aaPredicted RBP9.41□□□□□ -0.9
HMGA1P1-201ENST00000415560 Q6ZR54 194 aa9.41□□□□□ -0.9
HMGA1P1-201ENST00000415560 RNF151Q2KHN1 245 aa9.4□□□□□ -0.9
HMGA1P1-201ENST00000415560 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.39□□□□□ -0.91
HMGA1P1-201ENST00000415560 C1orf134Q5TEV5 83 aa9.39□□□□□ -0.91
HMGA1P1-201ENST00000415560 MIR7-3HGQ8N6C7 128 aa9.39□□□□□ -0.91
HMGA1P1-201ENST00000415560 LINC00308Q8TCZ7 52 aa9.39□□□□□ -0.91
HMGA1P1-201ENST00000415560 PPDPFQ9H3Y8 114 aa9.39□□□□□ -0.91
HMGA1P1-201ENST00000415560 COL5A1-AS1Q5SY13 56 aa9.38□□□□□ -0.91
HMGA1P1-201ENST00000415560 C10orf25Q5T742 122 aa9.38□□□□□ -0.91
HMGA1P1-201ENST00000415560 DAND5Q8N907 189 aa9.38□□□□□ -0.91
HMGA1P1-201ENST00000415560 CSMD3Q7Z407 3707 aa9.38□□□□□ -0.91
HMGA1P1-201ENST00000415560 LECT2O14960 151 aa9.37□□□□□ -0.91
HMGA1P1-201ENST00000415560 FXYD2P54710 66 aa9.37□□□□□ -0.91
HMGA1P1-201ENST00000415560 NPC2P61916 151 aa9.37□□□□□ -0.91
HMGA1P1-201ENST00000415560 Q6ZRU5 148 aa9.37□□□□□ -0.91
HMGA1P1-201ENST00000415560 CARD19Q96LW7 228 aa9.37□□□□□ -0.91
HMGA1P1-201ENST00000415560 C6orf48Q9UBA6 75 aa9.37□□□□□ -0.91
HMGA1P1-201ENST00000415560 PLECQ15149 4684 aaKnown RBP9.36□□□□□ -0.91
HMGA1P1-201ENST00000415560 EREGO14944 169 aa9.36□□□□□ -0.91
HMGA1P1-201ENST00000415560 C9orf116Q5BN46 136 aaPredicted RBP9.36□□□□□ -0.91
HMGA1P1-201ENST00000415560 NHP2Q9NX24 153 aaKnown RBP9.36□□□□□ -0.91
HMGA1P1-201ENST00000415560 A4D1N5 150 aa9.35□□□□□ -0.91
HMGA1P1-201ENST00000415560 Q6ZRN7 208 aaPredicted RBP9.35□□□□□ -0.91
HMGA1P1-201ENST00000415560 STARD9Q9P2P6 4700 aa9.35□□□□□ -0.91
HMGA1P1-201ENST00000415560 RAB37Q96AX2 223 aa9.34□□□□□ -0.91
HMGA1P1-201ENST00000415560 TGP01266 2768 aa9.34□□□□□ -0.91
HMGA1P1-201ENST00000415560 LOC107984156A0A0G2JMH3 177 aa9.33□□□□□ -0.92
HMGA1P1-201ENST00000415560 LRCOL1A6NCL2 159 aa9.33□□□□□ -0.92
HMGA1P1-201ENST00000415560 NDUFC2-KCTD14E9PQ53 114 aa9.33□□□□□ -0.92
HMGA1P1-201ENST00000415560 ARL17AQ8IVW1 177 aa9.33□□□□□ -0.92
HMGA1P1-201ENST00000415560 PKIGQ9Y2B9 76 aa9.33□□□□□ -0.92
HMGA1P1-201ENST00000415560 TENM2Q9NT68 2774 aa9.33□□□□□ -0.92
HMGA1P1-201ENST00000415560 SND1-IT1Q9HBX3 110 aa9.32□□□□□ -0.92
HMGA1P1-201ENST00000415560 TLX1NBP0CAT3 122 aa9.31□□□□□ -0.92
HMGA1P1-201ENST00000415560 CNBPP62633 177 aaKnown RBP9.31□□□□□ -0.92
HMGA1P1-201ENST00000415560 WFDC2Q14508 124 aa9.31□□□□□ -0.92
HMGA1P1-201ENST00000415560 A0A0B4J2C4 111 aa9.3□□□□□ -0.92
HMGA1P1-201ENST00000415560 LOC107984640A0A0U1RRK4 108 aa9.3□□□□□ -0.92
HMGA1P1-201ENST00000415560 A0A1B0GWB2 263 aa9.3□□□□□ -0.92
HMGA1P1-201ENST00000415560 SLPIP03973 132 aa9.3□□□□□ -0.92
HMGA1P1-201ENST00000415560 CFC1BP0CG36 223 aa9.3□□□□□ -0.92
HMGA1P1-201ENST00000415560 CFC1P0CG37 223 aa9.3□□□□□ -0.92
HMGA1P1-201ENST00000415560 SOSTDC1Q6X4U4 206 aa9.3□□□□□ -0.92
HMGA1P1-201ENST00000415560 A0A087WTM6 91 aa9.29□□□□□ -0.92
HMGA1P1-201ENST00000415560 NDUFC2O95298 119 aa9.29□□□□□ -0.92
HMGA1P1-201ENST00000415560 Q8N814 137 aa9.29□□□□□ -0.92
HMGA1P1-201ENST00000415560 PRO1854Q9UHT4 67 aa9.29□□□□□ -0.92
HMGA1P1-201ENST00000415560 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.28□□□□□ -0.92
HMGA1P1-201ENST00000415560 TRAV13-2A0A0B4J235 113 aa9.28□□□□□ -0.92
HMGA1P1-201ENST00000415560 RPL18AQ02543 176 aaKnown RBP9.28□□□□□ -0.92
HMGA1P1-201ENST00000415560 GAGE2EQ4V326 116 aa9.28□□□□□ -0.92
HMGA1P1-201ENST00000415560 GAGE2DQ9UEU5 116 aa9.28□□□□□ -0.92
HMGA1P1-201ENST00000415560 LCE6AA0A183 80 aa9.27□□□□□ -0.93
HMGA1P1-201ENST00000415560 VPS13DQ5THJ4 4388 aa9.27□□□□□ -0.93
HMGA1P1-201ENST00000415560 TAX1BP3O14907 124 aa9.26□□□□□ -0.93
HMGA1P1-201ENST00000415560 EIF4EBP3O60516 100 aaPredicted RBP9.26□□□□□ -0.93
HMGA1P1-201ENST00000415560 Q6ZRP5 223 aa9.26□□□□□ -0.93
HMGA1P1-201ENST00000415560 K7ERJ3 54 aa9.25□□□□□ -0.93
HMGA1P1-201ENST00000415560 C9orf163Q8N9P6 203 aa9.25□□□□□ -0.93
HMGA1P1-201ENST00000415560 XAGE1AQ9HD64 81 aa9.25□□□□□ -0.93
HMGA1P1-201ENST00000415560 C9orf118A6NHY6 69 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms