RNA–Protein interactions for RNA: ENST00000415017.1

CNN3-203, Transcript of calponin 3, humanhuman

TSL 2

Gene CNN3, Length 792 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-203ENST00000415017 CXCL5P42830 114 aa8.62□□□□□ -1.03
CNN3-203ENST00000415017 RNF151Q2KHN1 245 aa8.62□□□□□ -1.03
CNN3-203ENST00000415017 C6orf226Q5I0X4 101 aa8.62□□□□□ -1.03
CNN3-203ENST00000415017 LINC00526Q96FQ7 95 aa8.62□□□□□ -1.03
CNN3-203ENST00000415017 DNAH8Q96JB1 4490 aa8.61□□□□□ -1.03
CNN3-203ENST00000415017 C10orf25Q5T742 122 aa8.61□□□□□ -1.03
CNN3-203ENST00000415017 SFTA2Q6UW10 78 aa8.61□□□□□ -1.03
CNN3-203ENST00000415017 TOMM7Q9P0U1 55 aa8.61□□□□□ -1.03
CNN3-203ENST00000415017 NDUFA1O15239 70 aa8.6□□□□□ -1.03
CNN3-203ENST00000415017 SMIM6P0DI80 62 aa8.6□□□□□ -1.03
CNN3-203ENST00000415017 NMUP48645 174 aa8.6□□□□□ -1.03
CNN3-203ENST00000415017 SYCNQ0VAF6 134 aa8.6□□□□□ -1.03
CNN3-203ENST00000415017 C2orf82Q6UX34 121 aa8.6□□□□□ -1.03
CNN3-203ENST00000415017 UNQ6190/PRO20217Q6UXQ8 127 aa8.6□□□□□ -1.03
CNN3-203ENST00000415017 Q6ZRU5 148 aa8.6□□□□□ -1.03
CNN3-203ENST00000415017 C9orf163Q8N9P6 203 aa8.6□□□□□ -1.03
CNN3-203ENST00000415017 DYNC1H1Q14204 4646 aaKnown RBP8.59□□□□□ -1.03
CNN3-203ENST00000415017 TRBV30A0A0K0K1B3 111 aa8.59□□□□□ -1.03
CNN3-203ENST00000415017 EREGO14944 169 aa8.59□□□□□ -1.03
CNN3-203ENST00000415017 PRSS2P07478 247 aa8.59□□□□□ -1.03
CNN3-203ENST00000415017 KRTAP10-2P60368 255 aa8.59□□□□□ -1.03
CNN3-203ENST00000415017 CAMK2N2Q96S95 79 aa8.59□□□□□ -1.03
CNN3-203ENST00000415017 C6orf48Q9UBA6 75 aa8.59□□□□□ -1.03
CNN3-203ENST00000415017 CKS1BP61024 79 aa8.58□□□□□ -1.04
CNN3-203ENST00000415017 PGPEP1Q9NXJ5 209 aa8.58□□□□□ -1.04
CNN3-203ENST00000415017 NDUFA12Q9UI09 145 aa8.58□□□□□ -1.04
CNN3-203ENST00000415017 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.57□□□□□ -1.04
CNN3-203ENST00000415017 HSBP1L1C9JCN9 74 aa8.57□□□□□ -1.04
CNN3-203ENST00000415017 TLX1NBP0CAT3 122 aa8.57□□□□□ -1.04
CNN3-203ENST00000415017 HERV-K104P63124 156 aa8.57□□□□□ -1.04
CNN3-203ENST00000415017 PCP2Q8IVA1 136 aa8.57□□□□□ -1.04
CNN3-203ENST00000415017 CARD19Q96LW7 228 aa8.57□□□□□ -1.04
CNN3-203ENST00000415017 VAMP8Q9BV40 100 aa8.57□□□□□ -1.04
CNN3-203ENST00000415017 TTTY13Q9BZ97 58 aa8.57□□□□□ -1.04
CNN3-203ENST00000415017 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.56□□□□□ -1.04
CNN3-203ENST00000415017 MYMXA0A1B0GTQ4 84 aa8.56□□□□□ -1.04
CNN3-203ENST00000415017 DLEU1O43261 78 aa8.56□□□□□ -1.04
CNN3-203ENST00000415017 LGALS3P17931 250 aaKnown RBP8.56□□□□□ -1.04
CNN3-203ENST00000415017 BOD1L2Q8IYS8 172 aa8.56□□□□□ -1.04
CNN3-203ENST00000415017 COX8AP10176 69 aa8.55□□□□□ -1.04
CNN3-203ENST00000415017 SPATA45Q537H7 98 aa8.55□□□□□ -1.04
CNN3-203ENST00000415017 SDIM1Q6ZPB5 146 aa8.55□□□□□ -1.04
CNN3-203ENST00000415017 PAM16Q9Y3D7 125 aa8.55□□□□□ -1.04
CNN3-203ENST00000415017 A0A0J9YXY3 114 aa8.54□□□□□ -1.04
CNN3-203ENST00000415017 COX17Q14061 63 aa8.54□□□□□ -1.04
CNN3-203ENST00000415017 LRP1BQ9NZR2 4599 aa8.54□□□□□ -1.04
CNN3-203ENST00000415017 IGLV5-52A0A0A0MRZ9 124 aa8.53□□□□□ -1.04
CNN3-203ENST00000415017 C9orf116Q5BN46 136 aaPredicted RBP8.53□□□□□ -1.04
CNN3-203ENST00000415017 LITAFQ99732 161 aa8.53□□□□□ -1.04
CNN3-203ENST00000415017 ZNF815PA8K554 130 aa8.52□□□□□ -1.05
CNN3-203ENST00000415017 NDUFC2-KCTD14E9PQ53 114 aa8.52□□□□□ -1.05
CNN3-203ENST00000415017 TIMM17BO60830 172 aa8.52□□□□□ -1.05
CNN3-203ENST00000415017 ERG28Q9UKR5 140 aa8.52□□□□□ -1.05
CNN3-203ENST00000415017 FUSP35637 526 aaKnown RBP eCLIP8.51□□□□□ -1.05
CNN3-203ENST00000415017 S100A12P80511 92 aa8.51□□□□□ -1.05
CNN3-203ENST00000415017 CIRBPQ14011 172 aaKnown RBP8.51□□□□□ -1.05
CNN3-203ENST00000415017 LINC00518Q8N0U6 118 aa8.51□□□□□ -1.05
CNN3-203ENST00000415017 EPPK1P58107 5090 aaKnown RBP8.5□□□□□ -1.05
CNN3-203ENST00000415017 LOC107984156A0A0G2JMH3 177 aa8.5□□□□□ -1.05
CNN3-203ENST00000415017 LOC107984640A0A0U1RRK4 108 aa8.5□□□□□ -1.05
CNN3-203ENST00000415017 LINC00587B1AMM8 73 aa8.5□□□□□ -1.05
CNN3-203ENST00000415017 Q6ZRP5 223 aa8.5□□□□□ -1.05
CNN3-203ENST00000415017 ARL17AQ8IVW1 177 aa8.5□□□□□ -1.05
CNN3-203ENST00000415017 C14orf144Q96I85 54 aa8.5□□□□□ -1.05
CNN3-203ENST00000415017 EPM2AB3EWF7 344 aa8.49□□□□□ -1.05
CNN3-203ENST00000415017 GCSHP23434 173 aa8.49□□□□□ -1.05
CNN3-203ENST00000415017 ADAMTSL4-AS1Q5T5F5 129 aa8.49□□□□□ -1.05
CNN3-203ENST00000415017 Q6ZSA8 131 aa8.49□□□□□ -1.05
CNN3-203ENST00000415017 C12orf57Q99622 126 aa8.49□□□□□ -1.05
CNN3-203ENST00000415017 KRTAP17-1Q9BYP8 105 aa8.49□□□□□ -1.05
CNN3-203ENST00000415017 PKIGQ9Y2B9 76 aa8.49□□□□□ -1.05
CNN3-203ENST00000415017 C16orf90A8MZG2 172 aa8.48□□□□□ -1.05
CNN3-203ENST00000415017 SMIM13P0DJ93 91 aa8.48□□□□□ -1.05
CNN3-203ENST00000415017 PTTG1IPP53801 180 aa8.48□□□□□ -1.05
CNN3-203ENST00000415017 LINC01620Q4KN68 170 aa8.48□□□□□ -1.05
CNN3-203ENST00000415017 SLC25A34Q6PIV7 304 aa8.48□□□□□ -1.05
CNN3-203ENST00000415017 PPDPFQ9H3Y8 114 aa8.48□□□□□ -1.05
CNN3-203ENST00000415017 TP73-AS1Q9UF72 201 aa8.48□□□□□ -1.05
CNN3-203ENST00000415017 A0A096LNI7 61 aa8.47□□□□□ -1.05
CNN3-203ENST00000415017 KRTAP10-1P60331 282 aa8.47□□□□□ -1.05
CNN3-203ENST00000415017 C2orf91Q6ZV80 131 aa8.47□□□□□ -1.05
CNN3-203ENST00000415017 HIGD1BQ9P298 99 aa8.47□□□□□ -1.05
CNN3-203ENST00000415017 APOBP04114 4563 aaKnown RBP8.46□□□□□ -1.05
CNN3-203ENST00000415017 PANO1I0J062 215 aa8.46□□□□□ -1.06
CNN3-203ENST00000415017 PFN2P35080 140 aa8.46□□□□□ -1.06
CNN3-203ENST00000415017 MEIG1Q5JSS6 88 aa8.46□□□□□ -1.06
CNN3-203ENST00000415017 C9orf129Q5T035 196 aaKnown RBP8.46□□□□□ -1.06
CNN3-203ENST00000415017 SPANXDQ9BXN6 97 aa8.46□□□□□ -1.06
CNN3-203ENST00000415017 SPANXB1Q9NS25 103 aaPredicted RBP8.46□□□□□ -1.06
CNN3-203ENST00000415017 SPANXCQ9NY87 97 aa8.46□□□□□ -1.06
CNN3-203ENST00000415017 LINC00158P58513 81 aa8.45□□□□□ -1.06
CNN3-203ENST00000415017 MIR7-3HGQ8N6C7 128 aa8.45□□□□□ -1.06
CNN3-203ENST00000415017 SND1-IT1Q9HBX3 110 aa8.45□□□□□ -1.06
CNN3-203ENST00000415017 SCGB1D4Q6XE38 83 aa8.44□□□□□ -1.06
CNN3-203ENST00000415017 Q6ZVH6 145 aa8.44□□□□□ -1.06
CNN3-203ENST00000415017 SPACA4Q8TDM5 124 aa8.44□□□□□ -1.06
CNN3-203ENST00000415017 UQCR10Q9UDW1 63 aa8.44□□□□□ -1.06
CNN3-203ENST00000415017 PLA2G2DQ9UNK4 145 aa8.44□□□□□ -1.06
CNN3-203ENST00000415017 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.44□□□□□ -1.06
CNN3-203ENST00000415017 TMEM238C9JI98 176 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms