RNA–Protein interactions for RNA: ENST00000414700.7

SHMT2-202, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-202ENST00000414700 TRIAP1O43715 76 aa10.74□□□□□ -0.69
SHMT2-202ENST00000414700 PLECQ15149 4684 aaKnown RBP10.73□□□□□ -0.69
SHMT2-202ENST00000414700 ICOSQ9Y6W8 199 aa10.73□□□□□ -0.69
SHMT2-202ENST00000414700 CHCHD7Q9BUK0 85 aa10.72□□□□□ -0.69
SHMT2-202ENST00000414700 H3BNG1 76 aa10.71□□□□□ -0.69
SHMT2-202ENST00000414700 H7C423 109 aa10.71□□□□□ -0.69
SHMT2-202ENST00000414700 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.7□□□□□ -0.7
SHMT2-202ENST00000414700 IGKV2-29A2NJV5 120 aaPredicted RBP10.7□□□□□ -0.7
SHMT2-202ENST00000414700 TRBV6-8A0A0A6YYG3 113 aa10.69□□□□□ -0.7
SHMT2-202ENST00000414700 ZNF22P17026 224 aaPredicted RBP10.69□□□□□ -0.7
SHMT2-202ENST00000414700 C20orf203Q8NBC4 194 aa10.69□□□□□ -0.7
SHMT2-202ENST00000414700 CHCHD5Q9BSY4 110 aa10.69□□□□□ -0.7
SHMT2-202ENST00000414700 A0A0J9YXY3 114 aa10.68□□□□□ -0.7
SHMT2-202ENST00000414700 TMEM101Q96IK0 257 aa10.68□□□□□ -0.7
SHMT2-202ENST00000414700 COX6CP09669 75 aa10.68□□□□□ -0.7
SHMT2-202ENST00000414700 CEMP1Q6PRD7 247 aaPredicted RBP10.68□□□□□ -0.7
SHMT2-202ENST00000414700 LYPD5Q6UWN5 251 aa10.67□□□□□ -0.7
SHMT2-202ENST00000414700 SPANXDQ9BXN6 97 aa10.67□□□□□ -0.7
SHMT2-202ENST00000414700 ESRGQ1W209 222 aa10.66□□□□□ -0.7
SHMT2-202ENST00000414700 IMUPQ9GZP8 106 aa10.66□□□□□ -0.7
SHMT2-202ENST00000414700 IGHV3-64A0A075B6Q5 118 aa10.65□□□□□ -0.7
SHMT2-202ENST00000414700 LST1O00453 97 aa10.65□□□□□ -0.7
SHMT2-202ENST00000414700 LITAFQ99732 161 aa10.65□□□□□ -0.7
SHMT2-202ENST00000414700 OPRPNQ99935 248 aaPredicted RBP10.65□□□□□ -0.7
SHMT2-202ENST00000414700 SPANXCQ9NY87 97 aa10.65□□□□□ -0.7
SHMT2-202ENST00000414700 TMEM243Q9BU79 118 aa10.65□□□□□ -0.71
SHMT2-202ENST00000414700 PPDPFQ9H3Y8 114 aa10.65□□□□□ -0.71
SHMT2-202ENST00000414700 ACYP1P07311 99 aa10.64□□□□□ -0.71
SHMT2-202ENST00000414700 Q8N3U1 123 aa10.64□□□□□ -0.71
SHMT2-202ENST00000414700 FAM104AQ969W3 186 aa10.63□□□□□ -0.71
SHMT2-202ENST00000414700 UBE2D4Q9Y2X8 147 aa10.63□□□□□ -0.71
SHMT2-202ENST00000414700 A0A0J9YXV3 536 aa10.62□□□□□ -0.71
SHMT2-202ENST00000414700 FAM236AA0A1B0GUQ0 79 aa10.62□□□□□ -0.71
SHMT2-202ENST00000414700 FAM236BA0A1B0GV22 79 aa10.62□□□□□ -0.71
SHMT2-202ENST00000414700 CLEC2BQ92478 149 aa10.62□□□□□ -0.71
SHMT2-202ENST00000414700 IGHV3-30-3P0DP02 117 aa10.62□□□□□ -0.71
SHMT2-202ENST00000414700 MIAQ16674 131 aa10.62□□□□□ -0.71
SHMT2-202ENST00000414700 RNASE13Q5GAN3 156 aaKnown RBP10.62□□□□□ -0.71
SHMT2-202ENST00000414700 LELP1Q5T871 98 aa10.62□□□□□ -0.71
SHMT2-202ENST00000414700 TIMM21Q9BVV7 248 aa10.62□□□□□ -0.71
SHMT2-202ENST00000414700 DNAH1Q9P2D7 4330 aa10.62□□□□□ -0.71
SHMT2-202ENST00000414700 NUPR2A6NF83 97 aa10.61□□□□□ -0.71
SHMT2-202ENST00000414700 UBE2L6O14933 153 aa10.61□□□□□ -0.71
SHMT2-202ENST00000414700 C3orf22Q8N5N4 141 aa10.61□□□□□ -0.71
SHMT2-202ENST00000414700 APLNQ9ULZ1 77 aa10.61□□□□□ -0.71
SHMT2-202ENST00000414700 PRSS2P07478 247 aa10.6□□□□□ -0.71
SHMT2-202ENST00000414700 C9orf153Q5TBE3 101 aa10.6□□□□□ -0.71
SHMT2-202ENST00000414700 WFDC10BQ8IUB3 73 aa10.6□□□□□ -0.71
SHMT2-202ENST00000414700 IGLV4-60A0A075B6I1 120 aa10.6□□□□□ -0.71
SHMT2-202ENST00000414700 IGLV4-3A0A075B6K6 122 aa10.6□□□□□ -0.71
SHMT2-202ENST00000414700 LINC00588Q9Y4M8 146 aa10.59□□□□□ -0.71
SHMT2-202ENST00000414700 TIRAPP58753 221 aa10.58□□□□□ -0.72
SHMT2-202ENST00000414700 ADAMTSL4-AS1Q5T5F5 129 aa10.58□□□□□ -0.72
SHMT2-202ENST00000414700 MUC7Q8TAX7 377 aa10.58□□□□□ -0.72
SHMT2-202ENST00000414700 PYGO1Q9Y3Y4 419 aa10.58□□□□□ -0.72
SHMT2-202ENST00000414700 UQCRQO14949 82 aa10.58□□□□□ -0.72
SHMT2-202ENST00000414700 WWC2-AS2Q96NR7 200 aa10.58□□□□□ -0.72
SHMT2-202ENST00000414700 CSDC2Q9Y534 153 aaKnown RBP10.58□□□□□ -0.72
SHMT2-202ENST00000414700 LINC00643Q86TS7 51 aa10.57□□□□□ -0.72
SHMT2-202ENST00000414700 NDUFA12Q9UI09 145 aa10.57□□□□□ -0.72
SHMT2-202ENST00000414700 KLK5Q9Y337 293 aaPredicted RBP10.57□□□□□ -0.72
SHMT2-202ENST00000414700 IGHV1-58A0A0C4DH39 117 aa10.57□□□□□ -0.72
SHMT2-202ENST00000414700 DGAT2L7PQ6IED9 249 aa10.57□□□□□ -0.72
SHMT2-202ENST00000414700 LINC00526Q96FQ7 95 aa10.57□□□□□ -0.72
SHMT2-202ENST00000414700 TRAV8-3A0A0A6YYJ7 113 aa10.56□□□□□ -0.72
SHMT2-202ENST00000414700 MRPS36P82909 103 aaKnown RBP10.56□□□□□ -0.72
SHMT2-202ENST00000414700 CDC42SE2Q9NRR3 84 aa10.56□□□□□ -0.72
SHMT2-202ENST00000414700 TIMM17BO60830 172 aa10.55□□□□□ -0.72
SHMT2-202ENST00000414700 CCL18P55774 89 aa10.55□□□□□ -0.72
SHMT2-202ENST00000414700 VPS13DQ5THJ4 4388 aa10.55□□□□□ -0.72
SHMT2-202ENST00000414700 A0A1B0GX51 115 aa10.54□□□□□ -0.72
SHMT2-202ENST00000414700 J3KT08 172 aa10.54□□□□□ -0.72
SHMT2-202ENST00000414700 HERVK_113P63121 156 aa10.54□□□□□ -0.72
SHMT2-202ENST00000414700 C5orf47Q569G3 176 aa10.54□□□□□ -0.72
SHMT2-202ENST00000414700 SMCR5Q8TEV8 140 aa10.54□□□□□ -0.72
SHMT2-202ENST00000414700 A0A1B0GUV1 79 aa10.53□□□□□ -0.72
SHMT2-202ENST00000414700 CXCL5P42830 114 aa10.53□□□□□ -0.72
SHMT2-202ENST00000414700 CLPSL2Q6UWE3 100 aa10.53□□□□□ -0.72
SHMT2-202ENST00000414700 KMT2AQ03164 3969 aa10.53□□□□□ -0.72
SHMT2-202ENST00000414700 IGKV3OR2-268A0A0C4DH90 116 aa10.52□□□□□ -0.73
SHMT2-202ENST00000414700 NPC2P61916 151 aa10.52□□□□□ -0.73
SHMT2-202ENST00000414700 SDIM1Q6ZPB5 146 aa10.52□□□□□ -0.73
SHMT2-202ENST00000414700 ANGP03950 147 aaKnown RBP10.51□□□□□ -0.73
SHMT2-202ENST00000414700 TINCRA0A1B0GVN0 87 aa10.5□□□□□ -0.73
SHMT2-202ENST00000414700 LINC00269Q8N2A0 174 aa10.5□□□□□ -0.73
SHMT2-202ENST00000414700 COX7A2LO14548 114 aa10.5□□□□□ -0.73
SHMT2-202ENST00000414700 COX7CP15954 63 aa10.5□□□□□ -0.73
SHMT2-202ENST00000414700 CASC10Q5T4H9 136 aa10.5□□□□□ -0.73
SHMT2-202ENST00000414700 C5orf38Q86SI9 138 aa10.5□□□□□ -0.73
SHMT2-202ENST00000414700 KLK12Q9UKR0 248 aa10.5□□□□□ -0.73
SHMT2-202ENST00000414700 TRAV13-1A0A0B4J241 112 aa10.49□□□□□ -0.73
SHMT2-202ENST00000414700 UPK3BQ9BT76 320 aa10.49□□□□□ -0.73
SHMT2-202ENST00000414700 LOC107984640A0A0U1RRK4 108 aa10.48□□□□□ -0.73
SHMT2-202ENST00000414700 LINC01556Q5JQF7 62 aa10.48□□□□□ -0.73
SHMT2-202ENST00000414700 UBE2DNLQ8IWF7 75 aa10.48□□□□□ -0.73
SHMT2-202ENST00000414700 DNAH10OSP0CZ25 163 aa10.48□□□□□ -0.73
SHMT2-202ENST00000414700 DAND5Q8N907 189 aa10.48□□□□□ -0.73
SHMT2-202ENST00000414700 CRYGAP11844 174 aa10.47□□□□□ -0.73
SHMT2-202ENST00000414700 Q9H8V8 135 aa10.47□□□□□ -0.73
SHMT2-202ENST00000414700 DNAH10Q8IVF4 4471 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms