RNA–Protein interactions for RNA: ENST00000414057.6

SCAMP4-204, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 1 (best)

Gene SCAMP4, Length 1,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-204ENST00000414057 SMIM1B2RUZ4 78 aa11.24□□□□□ -0.61
SCAMP4-204ENST00000414057 GCSHP23434 173 aa11.24□□□□□ -0.61
SCAMP4-204ENST00000414057 FUSP35637 526 aaKnown RBP eCLIP11.24□□□□□ -0.61
SCAMP4-204ENST00000414057 ENHOQ6UWT2 76 aa11.24□□□□□ -0.61
SCAMP4-204ENST00000414057 XCL1P47992 114 aa11.23□□□□□ -0.61
SCAMP4-204ENST00000414057 HIGD1BQ9P298 99 aa11.23□□□□□ -0.61
SCAMP4-204ENST00000414057 IGLV5-52A0A0A0MRZ9 124 aa11.22□□□□□ -0.61
SCAMP4-204ENST00000414057 TRAV8-3A0A0A6YYJ7 113 aa11.22□□□□□ -0.61
SCAMP4-204ENST00000414057 ZNF815PA8K554 130 aa11.22□□□□□ -0.61
SCAMP4-204ENST00000414057 EPM2AB3EWF7 344 aa11.22□□□□□ -0.61
SCAMP4-204ENST00000414057 UBE2WQ96B02 151 aa11.22□□□□□ -0.61
SCAMP4-204ENST00000414057 IGHV3-64A0A075B6Q5 118 aa11.21□□□□□ -0.61
SCAMP4-204ENST00000414057 LRCOL1A6NCL2 159 aa11.2□□□□□ -0.62
SCAMP4-204ENST00000414057 COX7A2LO14548 114 aa11.2□□□□□ -0.62
SCAMP4-204ENST00000414057 TSPEAR-AS2P59090 65 aa11.2□□□□□ -0.62
SCAMP4-204ENST00000414057 TTTY13Q9BZ97 58 aa11.2□□□□□ -0.62
SCAMP4-204ENST00000414057 KRTAP10-1P60331 282 aa11.19□□□□□ -0.62
SCAMP4-204ENST00000414057 C2orf91Q6ZV80 131 aa11.19□□□□□ -0.62
SCAMP4-204ENST00000414057 Q8N814 137 aa11.19□□□□□ -0.62
SCAMP4-204ENST00000414057 COX11Q9Y6N1 276 aa11.19□□□□□ -0.62
SCAMP4-204ENST00000414057 IGLV10-54A0A075B6I4 117 aa11.19□□□□□ -0.62
SCAMP4-204ENST00000414057 LINC00587B1AMM8 73 aa11.19□□□□□ -0.62
SCAMP4-204ENST00000414057 XGP55808 180 aa11.19□□□□□ -0.62
SCAMP4-204ENST00000414057 FOXI1Q12951 378 aa11.19□□□□□ -0.62
SCAMP4-204ENST00000414057 SFTA2Q6UW10 78 aa11.19□□□□□ -0.62
SCAMP4-204ENST00000414057 C5orf38Q86SI9 138 aa11.19□□□□□ -0.62
SCAMP4-204ENST00000414057 SCGB1D4Q6XE38 83 aa11.18□□□□□ -0.62
SCAMP4-204ENST00000414057 RMI2Q96E14 147 aa11.18□□□□□ -0.62
SCAMP4-204ENST00000414057 TP73-AS1Q9UF72 201 aa11.18□□□□□ -0.62
SCAMP4-204ENST00000414057 NDUFA12Q9UI09 145 aa11.18□□□□□ -0.62
SCAMP4-204ENST00000414057 GAGE12HA6NDE8 117 aa11.17□□□□□ -0.62
SCAMP4-204ENST00000414057 NDUFA1O15239 70 aa11.17□□□□□ -0.62
SCAMP4-204ENST00000414057 APOMO95445 188 aa11.17□□□□□ -0.62
SCAMP4-204ENST00000414057 CTAG1AP78358 180 aa11.17□□□□□ -0.62
SCAMP4-204ENST00000414057 COX7B2Q8TF08 81 aa11.17□□□□□ -0.62
SCAMP4-204ENST00000414057 C1orf43Q9BWL3 253 aa11.17□□□□□ -0.62
SCAMP4-204ENST00000414057 MALP21145 153 aa11.16□□□□□ -0.62
SCAMP4-204ENST00000414057 Q8IZM0 81 aa11.15□□□□□ -0.62
SCAMP4-204ENST00000414057 HERV-K104P63124 156 aa11.14□□□□□ -0.63
SCAMP4-204ENST00000414057 TAL2Q16559 108 aa11.14□□□□□ -0.63
SCAMP4-204ENST00000414057 HSD52Q0P140 79 aa11.13□□□□□ -0.63
SCAMP4-204ENST00000414057 M0R143 59 aa11.12□□□□□ -0.63
SCAMP4-204ENST00000414057 PRSS2P07478 247 aa11.12□□□□□ -0.63
SCAMP4-204ENST00000414057 CXCL5P42830 114 aa11.12□□□□□ -0.63
SCAMP4-204ENST00000414057 Q5VSD8 79 aa11.12□□□□□ -0.63
SCAMP4-204ENST00000414057 ZNF625Q96I27 306 aaPredicted RBP11.12□□□□□ -0.63
SCAMP4-204ENST00000414057 A0A0J9YXY3 114 aa11.12□□□□□ -0.63
SCAMP4-204ENST00000414057 TMEM238C9JI98 176 aa11.12□□□□□ -0.63
SCAMP4-204ENST00000414057 KRTAP26-1Q6PEX3 210 aa11.12□□□□□ -0.63
SCAMP4-204ENST00000414057 ORAOV1Q8WV07 137 aa11.12□□□□□ -0.63
SCAMP4-204ENST00000414057 SPANXB1Q9NS25 103 aaPredicted RBP11.12□□□□□ -0.63
SCAMP4-204ENST00000414057 TOMM7Q9P0U1 55 aa11.12□□□□□ -0.63
SCAMP4-204ENST00000414057 IGKV2D-24A0A075B6R9 120 aa11.11□□□□□ -0.63
SCAMP4-204ENST00000414057 FAM229AH3BQW9 127 aa11.11□□□□□ -0.63
SCAMP4-204ENST00000414057 TIMM17BO60830 172 aa11.11□□□□□ -0.63
SCAMP4-204ENST00000414057 INAFM2P0DMQ5 153 aa11.11□□□□□ -0.63
SCAMP4-204ENST00000414057 C6orf226Q5I0X4 101 aa11.11□□□□□ -0.63
SCAMP4-204ENST00000414057 CFAP161Q6P656 301 aa11.1□□□□□ -0.63
SCAMP4-204ENST00000414057 CIRBPQ14011 172 aaKnown RBP11.09□□□□□ -0.63
SCAMP4-204ENST00000414057 Q6ZVH6 145 aa11.09□□□□□ -0.63
SCAMP4-204ENST00000414057 HIST1H4GQ99525 98 aa11.09□□□□□ -0.63
SCAMP4-204ENST00000414057 SMR3BP02814 79 aaPredicted RBP11.08□□□□□ -0.64
SCAMP4-204ENST00000414057 SRSF9Q13242 221 aaKnown RBP eCLIP11.07□□□□□ -0.64
SCAMP4-204ENST00000414057 KIAA0087Q14695 138 aa11.07□□□□□ -0.64
SCAMP4-204ENST00000414057 LBHQ53QV2 105 aaPredicted RBP11.07□□□□□ -0.64
SCAMP4-204ENST00000414057 LECT2O14960 151 aa11.06□□□□□ -0.64
SCAMP4-204ENST00000414057 HINT1P49773 126 aaPredicted RBP11.06□□□□□ -0.64
SCAMP4-204ENST00000414057 CKS1BP61024 79 aa11.06□□□□□ -0.64
SCAMP4-204ENST00000414057 SPAG11BQ08648 103 aa11.06□□□□□ -0.64
SCAMP4-204ENST00000414057 WFDC2Q14508 124 aa11.06□□□□□ -0.64
SCAMP4-204ENST00000414057 SNHG12Q9BXW3 62 aa11.06□□□□□ -0.64
SCAMP4-204ENST00000414057 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.06□□□□□ -0.64
SCAMP4-204ENST00000414057 F8WDY8 70 aa11.06□□□□□ -0.64
SCAMP4-204ENST00000414057 BVES-AS1Q5T3Y7 98 aa11.06□□□□□ -0.64
SCAMP4-204ENST00000414057 CEND1Q8N111 149 aa11.06□□□□□ -0.64
SCAMP4-204ENST00000414057 SPANXDQ9BXN6 97 aa11.06□□□□□ -0.64
SCAMP4-204ENST00000414057 SPANXCQ9NY87 97 aa11.06□□□□□ -0.64
SCAMP4-204ENST00000414057 LITAFQ99732 161 aa11.05□□□□□ -0.64
SCAMP4-204ENST00000414057 MEIG1Q5JSS6 88 aa11.04□□□□□ -0.64
SCAMP4-204ENST00000414057 COPS9Q8WXC6 57 aa11.04□□□□□ -0.64
SCAMP4-204ENST00000414057 FAT1Q14517 4588 aa11.04□□□□□ -0.64
SCAMP4-204ENST00000414057 ZNF561-AS1K7EIQ3 104 aa11.03□□□□□ -0.64
SCAMP4-204ENST00000414057 HAMPP81172 84 aa11.03□□□□□ -0.64
SCAMP4-204ENST00000414057 C14orf177Q52M58 125 aa11.03□□□□□ -0.64
SCAMP4-204ENST00000414057 TMEM238LA0A1B0GVL6 79 aa11.02□□□□□ -0.65
SCAMP4-204ENST00000414057 A6NJY4 79 aa11.02□□□□□ -0.65
SCAMP4-204ENST00000414057 IFITM1P13164 125 aa11.02□□□□□ -0.65
SCAMP4-204ENST00000414057 BATFQ16520 125 aa11.02□□□□□ -0.65
SCAMP4-204ENST00000414057 C2orf48Q96LS8 159 aa11.02□□□□□ -0.65
SCAMP4-204ENST00000414057 FAM30AQ9NZY2 134 aa11.02□□□□□ -0.65
SCAMP4-204ENST00000414057 GVQW2A0A096LPI5 108 aaPredicted RBP11.01□□□□□ -0.65
SCAMP4-204ENST00000414057 A6NDN8 102 aa11.01□□□□□ -0.65
SCAMP4-204ENST00000414057 COX17Q14061 63 aa11.01□□□□□ -0.65
SCAMP4-204ENST00000414057 C15orf56Q8N910 161 aa11.01□□□□□ -0.65
SCAMP4-204ENST00000414057 PPDPFQ9H3Y8 114 aa11.01□□□□□ -0.65
SCAMP4-204ENST00000414057 PTTG1IPP53801 180 aa11□□□□□ -0.65
SCAMP4-204ENST00000414057 Q6ZSA8 131 aa11□□□□□ -0.65
SCAMP4-204ENST00000414057 PLA2G1BP04054 148 aaKnown RBP11□□□□□ -0.65
SCAMP4-204ENST00000414057 RPL24P83731 157 aaKnown RBP11□□□□□ -0.65
SCAMP4-204ENST00000414057 COL5A1-AS1Q5SY13 56 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 120.7 ms