RNA–Protein interactions for RNA: ENST00000413141.5

VPS41-204, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-204ENST00000413141 CASC10Q5T4H9 136 aa4.43□□□□□ -1.7
VPS41-204ENST00000413141 RMI2Q96E14 147 aa4.43□□□□□ -1.7
VPS41-204ENST00000413141 TENM2Q9NT68 2774 aa4.42□□□□□ -1.7
VPS41-204ENST00000413141 NBDYA0A0U1RRE5 68 aa4.42□□□□□ -1.7
VPS41-204ENST00000413141 C3orf84H3BNL1 204 aa4.42□□□□□ -1.7
VPS41-204ENST00000413141 EIF4EBP3O60516 100 aaPredicted RBP4.42□□□□□ -1.7
VPS41-204ENST00000413141 PRSS2P07478 247 aa4.42□□□□□ -1.7
VPS41-204ENST00000413141 CXCL5P42830 114 aa4.42□□□□□ -1.7
VPS41-204ENST00000413141 HSD52Q0P140 79 aa4.42□□□□□ -1.7
VPS41-204ENST00000413141 KIAA0087Q14695 138 aa4.42□□□□□ -1.7
VPS41-204ENST00000413141 SFTA2Q6UW10 78 aa4.42□□□□□ -1.7
VPS41-204ENST00000413141 C15orf56Q8N910 161 aa4.42□□□□□ -1.7
VPS41-204ENST00000413141 KRTAP9-6A0A140TA67 174 aa4.41□□□□□ -1.7
VPS41-204ENST00000413141 TMEM238C9JI98 176 aa4.41□□□□□ -1.7
VPS41-204ENST00000413141 HERV-K104P63124 156 aa4.41□□□□□ -1.7
VPS41-204ENST00000413141 C6orf226Q5I0X4 101 aa4.41□□□□□ -1.7
VPS41-204ENST00000413141 CFAP161Q6P656 301 aa4.41□□□□□ -1.7
VPS41-204ENST00000413141 LINC00476Q8WZB0 136 aa4.41□□□□□ -1.7
VPS41-204ENST00000413141 LITAFQ99732 161 aa4.41□□□□□ -1.7
VPS41-204ENST00000413141 SPANXB1Q9NS25 103 aaPredicted RBP4.41□□□□□ -1.7
VPS41-204ENST00000413141 COX11Q9Y6N1 276 aa4.41□□□□□ -1.7
VPS41-204ENST00000413141 GVQW2A0A096LPI5 108 aaPredicted RBP4.4□□□□□ -1.71
VPS41-204ENST00000413141 M0R143 59 aa4.4□□□□□ -1.71
VPS41-204ENST00000413141 TIMM17BO60830 172 aa4.4□□□□□ -1.71
VPS41-204ENST00000413141 CKS1BP61024 79 aa4.4□□□□□ -1.71
VPS41-204ENST00000413141 TAL2Q16559 108 aa4.4□□□□□ -1.71
VPS41-204ENST00000413141 HIGD2BQ4VC39 106 aa4.4□□□□□ -1.71
VPS41-204ENST00000413141 MEIG1Q5JSS6 88 aa4.4□□□□□ -1.71
VPS41-204ENST00000413141 BVES-AS1Q5T3Y7 98 aa4.4□□□□□ -1.71
VPS41-204ENST00000413141 C2orf82Q6UX34 121 aa4.4□□□□□ -1.71
VPS41-204ENST00000413141 HIST1H4GQ99525 98 aa4.4□□□□□ -1.71
VPS41-204ENST00000413141 TM2D2Q9BX73 214 aa4.4□□□□□ -1.71
VPS41-204ENST00000413141 SNHG12Q9BXW3 62 aa4.4□□□□□ -1.71
VPS41-204ENST00000413141 ALMS1Q8TCU4 4167 aa4.39□□□□□ -1.71
VPS41-204ENST00000413141 USP17L23D6RBM5 183 aa4.39□□□□□ -1.71
VPS41-204ENST00000413141 GCSHP23434 173 aa4.39□□□□□ -1.71
VPS41-204ENST00000413141 HINT1P49773 126 aaPredicted RBP4.39□□□□□ -1.71
VPS41-204ENST00000413141 BATFQ16520 125 aa4.39□□□□□ -1.71
VPS41-204ENST00000413141 ADAMTSL4-AS1Q5T5F5 129 aa4.39□□□□□ -1.71
VPS41-204ENST00000413141 Q6ZR54 194 aa4.39□□□□□ -1.71
VPS41-204ENST00000413141 CEND1Q8N111 149 aa4.39□□□□□ -1.71
VPS41-204ENST00000413141 C6orf223Q8N319 242 aa4.39□□□□□ -1.71
VPS41-204ENST00000413141 NTN5Q8WTR8 489 aaPredicted RBP4.39□□□□□ -1.71
VPS41-204ENST00000413141 LINC00526Q96FQ7 95 aa4.39□□□□□ -1.71
VPS41-204ENST00000413141 SPANXDQ9BXN6 97 aa4.39□□□□□ -1.71
VPS41-204ENST00000413141 SPANXCQ9NY87 97 aa4.39□□□□□ -1.71
VPS41-204ENST00000413141 VPS13DQ5THJ4 4388 aa4.39□□□□□ -1.71
VPS41-204ENST00000413141 ZNF561-AS1K7EIQ3 104 aa4.38□□□□□ -1.71
VPS41-204ENST00000413141 PSCAO43653 123 aa4.38□□□□□ -1.71
VPS41-204ENST00000413141 LY6G6CO95867 125 aa4.38□□□□□ -1.71
VPS41-204ENST00000413141 SMIM13P0DJ93 91 aa4.38□□□□□ -1.71
VPS41-204ENST00000413141 FXYD2P54710 66 aa4.38□□□□□ -1.71
VPS41-204ENST00000413141 SRSF9Q13242 221 aaKnown RBP eCLIP4.38□□□□□ -1.71
VPS41-204ENST00000413141 CIRBPQ14011 172 aaKnown RBP4.38□□□□□ -1.71
VPS41-204ENST00000413141 C10orf25Q5T742 122 aa4.38□□□□□ -1.71
VPS41-204ENST00000413141 Q6ZRN7 208 aaPredicted RBP4.38□□□□□ -1.71
VPS41-204ENST00000413141 DAND5Q8N907 189 aa4.38□□□□□ -1.71
VPS41-204ENST00000413141 C2orf48Q96LS8 159 aa4.38□□□□□ -1.71
VPS41-204ENST00000413141 ERG28Q9UKR5 140 aa4.38□□□□□ -1.71
VPS41-204ENST00000413141 A0A0U1RRA0 63 aa4.37□□□□□ -1.71
VPS41-204ENST00000413141 F8WDY8 70 aa4.37□□□□□ -1.71
VPS41-204ENST00000413141 M0R2N4 97 aa4.37□□□□□ -1.71
VPS41-204ENST00000413141 LECT2O14960 151 aa4.37□□□□□ -1.71
VPS41-204ENST00000413141 WFDC2Q14508 124 aa4.37□□□□□ -1.71
VPS41-204ENST00000413141 UNQ6190/PRO20217Q6UXQ8 127 aa4.37□□□□□ -1.71
VPS41-204ENST00000413141 Q6ZVH6 145 aa4.37□□□□□ -1.71
VPS41-204ENST00000413141 CAMK2N2Q96S95 79 aa4.37□□□□□ -1.71
VPS41-204ENST00000413141 C6orf48Q9UBA6 75 aa4.37□□□□□ -1.71
VPS41-204ENST00000413141 TRBV30A0A0K0K1B3 111 aa4.36□□□□□ -1.71
VPS41-204ENST00000413141 IFITM1P13164 125 aa4.36□□□□□ -1.71
VPS41-204ENST00000413141 PFN2P35080 140 aa4.36□□□□□ -1.71
VPS41-204ENST00000413141 LINC00158P58513 81 aa4.36□□□□□ -1.71
VPS41-204ENST00000413141 NPC2P61916 151 aa4.36□□□□□ -1.71
VPS41-204ENST00000413141 COX17Q14061 63 aa4.36□□□□□ -1.71
VPS41-204ENST00000413141 C9orf116Q5BN46 136 aaPredicted RBP4.36□□□□□ -1.71
VPS41-204ENST00000413141 LCE3BQ5TA77 95 aa4.36□□□□□ -1.71
VPS41-204ENST00000413141 Q6ZRU5 148 aa4.36□□□□□ -1.71
VPS41-204ENST00000413141 MUSTN1Q8IVN3 82 aa4.36□□□□□ -1.71
VPS41-204ENST00000413141 MIR7-3HGQ8N6C7 128 aa4.36□□□□□ -1.71
VPS41-204ENST00000413141 LINC00308Q8TCZ7 52 aa4.36□□□□□ -1.71
VPS41-204ENST00000413141 DNAH10Q8IVF4 4471 aa4.35□□□□□ -1.71
VPS41-204ENST00000413141 KMT2AQ03164 3969 aa4.35□□□□□ -1.71
VPS41-204ENST00000413141 LRCOL1A6NCL2 159 aa4.35□□□□□ -1.71
VPS41-204ENST00000413141 PTTG1IPP53801 180 aa4.35□□□□□ -1.71
VPS41-204ENST00000413141 RPL24P83731 157 aaKnown RBP4.35□□□□□ -1.71
VPS41-204ENST00000413141 SYCNQ0VAF6 134 aa4.35□□□□□ -1.71
VPS41-204ENST00000413141 SOSTDC1Q6X4U4 206 aa4.35□□□□□ -1.71
VPS41-204ENST00000413141 COPS9Q8WXC6 57 aa4.35□□□□□ -1.71
VPS41-204ENST00000413141 CARD19Q96LW7 228 aa4.35□□□□□ -1.71
VPS41-204ENST00000413141 PPDPFQ9H3Y8 114 aa4.35□□□□□ -1.71
VPS41-204ENST00000413141 DNAH6Q9C0G6 4158 aa4.35□□□□□ -1.71
VPS41-204ENST00000413141 A0A1B0GWB2 263 aa4.34□□□□□ -1.71
VPS41-204ENST00000413141 A4D1N5 150 aa4.34□□□□□ -1.71
VPS41-204ENST00000413141 A6NDN8 102 aa4.34□□□□□ -1.71
VPS41-204ENST00000413141 K7ERJ3 54 aa4.34□□□□□ -1.71
VPS41-204ENST00000413141 SLPIP03973 132 aa4.34□□□□□ -1.71
VPS41-204ENST00000413141 C14orf177Q52M58 125 aa4.34□□□□□ -1.71
VPS41-204ENST00000413141 LBHQ53QV2 105 aaPredicted RBP4.34□□□□□ -1.71
VPS41-204ENST00000413141 COL5A1-AS1Q5SY13 56 aa4.34□□□□□ -1.71
VPS41-204ENST00000413141 NHP2Q9NX24 153 aaKnown RBP4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms