RNA–Protein interactions for RNA: ENST00000411938.1

LSM8-202, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

TSL 3

Gene LSM8, Length 290 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-202ENST00000411938 ARL17AQ8IVW1 177 aa4.64□□□□□ -1.67
LSM8-202ENST00000411938 MTURNQ8N3F0 131 aa4.64□□□□□ -1.67
LSM8-202ENST00000411938 DNAJC30Q96LL9 226 aa4.64□□□□□ -1.67
LSM8-202ENST00000411938 OPRPNQ99935 248 aaPredicted RBP4.64□□□□□ -1.67
LSM8-202ENST00000411938 SPXQ9BT56 116 aa4.64□□□□□ -1.67
LSM8-202ENST00000411938 TIMM21Q9BVV7 248 aa4.64□□□□□ -1.67
LSM8-202ENST00000411938 VCX2Q9H322 139 aa4.64□□□□□ -1.67
LSM8-202ENST00000411938 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.63□□□□□ -1.67
LSM8-202ENST00000411938 RS1O15537 224 aa4.63□□□□□ -1.67
LSM8-202ENST00000411938 CFC1BP0CG36 223 aa4.63□□□□□ -1.67
LSM8-202ENST00000411938 CFC1P0CG37 223 aa4.63□□□□□ -1.67
LSM8-202ENST00000411938 PSMB2P49721 201 aa4.63□□□□□ -1.67
LSM8-202ENST00000411938 KRTAP10-4P60372 401 aaPredicted RBP4.63□□□□□ -1.67
LSM8-202ENST00000411938 MRPS36P82909 103 aaKnown RBP4.63□□□□□ -1.67
LSM8-202ENST00000411938 SH2D6Q7Z4S9 175 aa4.63□□□□□ -1.67
LSM8-202ENST00000411938 C11orf72Q8NBR9 251 aa4.63□□□□□ -1.67
LSM8-202ENST00000411938 VSIG2Q96IQ7 327 aa4.63□□□□□ -1.67
LSM8-202ENST00000411938 PRO1854Q9UHT4 67 aa4.63□□□□□ -1.67
LSM8-202ENST00000411938 FAT3Q8TDW7 4589 aa4.63□□□□□ -1.67
LSM8-202ENST00000411938 IGHV3-64A0A075B6Q5 118 aa4.62□□□□□ -1.67
LSM8-202ENST00000411938 IGHV3-73A0A0B4J1V6 119 aa4.62□□□□□ -1.67
LSM8-202ENST00000411938 A0A0J9YXY3 114 aa4.62□□□□□ -1.67
LSM8-202ENST00000411938 TINCRA0A1B0GVN0 87 aa4.62□□□□□ -1.67
LSM8-202ENST00000411938 A4D1N5 150 aa4.62□□□□□ -1.67
LSM8-202ENST00000411938 GAGE12HA6NDE8 117 aa4.62□□□□□ -1.67
LSM8-202ENST00000411938 M0QXV9 152 aa4.62□□□□□ -1.67
LSM8-202ENST00000411938 TCL1BO95988 128 aa4.62□□□□□ -1.67
LSM8-202ENST00000411938 IGHV3-53P01767 116 aa4.62□□□□□ -1.67
LSM8-202ENST00000411938 IGHV3-30-3P0DP02 117 aa4.62□□□□□ -1.67
LSM8-202ENST00000411938 SMCPP49901 116 aaPredicted RBP4.62□□□□□ -1.67
LSM8-202ENST00000411938 Q6ZSA8 131 aa4.62□□□□□ -1.67
LSM8-202ENST00000411938 Q6ZUT4 128 aa4.62□□□□□ -1.67
LSM8-202ENST00000411938 TEN1Q86WV5 123 aa4.62□□□□□ -1.67
LSM8-202ENST00000411938 Q8N814 137 aa4.62□□□□□ -1.67
LSM8-202ENST00000411938 TMEM263Q8WUH6 116 aaKnown RBP4.62□□□□□ -1.67
LSM8-202ENST00000411938 CHCHD7Q9BUK0 85 aa4.62□□□□□ -1.67
LSM8-202ENST00000411938 SPANXDQ9BXN6 97 aa4.62□□□□□ -1.67
LSM8-202ENST00000411938 SPANXCQ9NY87 97 aa4.62□□□□□ -1.67
LSM8-202ENST00000411938 UBE2D4Q9Y2X8 147 aa4.62□□□□□ -1.67
LSM8-202ENST00000411938 PKHD1L1Q86WI1 4243 aa4.62□□□□□ -1.67
LSM8-202ENST00000411938 IGHV1-58A0A0C4DH39 117 aa4.61□□□□□ -1.67
LSM8-202ENST00000411938 LRCOL1A6NCL2 159 aa4.61□□□□□ -1.67
LSM8-202ENST00000411938 EIF4EBP3O60516 100 aaPredicted RBP4.61□□□□□ -1.67
LSM8-202ENST00000411938 IGHV3-33P01772 117 aa4.61□□□□□ -1.67
LSM8-202ENST00000411938 FOXI1Q12951 378 aa4.61□□□□□ -1.67
LSM8-202ENST00000411938 SCXQ7RTU7 201 aa4.61□□□□□ -1.67
LSM8-202ENST00000411938 LINC00612Q8N6U2 182 aa4.61□□□□□ -1.67
LSM8-202ENST00000411938 PPDPFLQ8WWR9 84 aa4.61□□□□□ -1.67
LSM8-202ENST00000411938 FAM104AQ969W3 186 aa4.61□□□□□ -1.67
LSM8-202ENST00000411938 SIGMAR1Q99720 223 aa4.61□□□□□ -1.67
LSM8-202ENST00000411938 LITAFQ99732 161 aa4.61□□□□□ -1.67
LSM8-202ENST00000411938 ICOSQ9Y6W8 199 aa4.61□□□□□ -1.67
LSM8-202ENST00000411938 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.6□□□□□ -1.67
LSM8-202ENST00000411938 IGLV5-45A0A087WSX0 123 aa4.6□□□□□ -1.67
LSM8-202ENST00000411938 IGKV2-29A2NJV5 120 aaPredicted RBP4.6□□□□□ -1.67
LSM8-202ENST00000411938 PAX4O43316 350 aa4.6□□□□□ -1.67
LSM8-202ENST00000411938 TIMM17BO60830 172 aa4.6□□□□□ -1.67
LSM8-202ENST00000411938 MT1HL1P0DM35 61 aa4.6□□□□□ -1.67
LSM8-202ENST00000411938 MIAQ16674 131 aa4.6□□□□□ -1.67
LSM8-202ENST00000411938 Q1RN00 199 aa4.6□□□□□ -1.67
LSM8-202ENST00000411938 SFTA2Q6UW10 78 aa4.6□□□□□ -1.67
LSM8-202ENST00000411938 LYPD5Q6UWN5 251 aa4.6□□□□□ -1.67
LSM8-202ENST00000411938 MUSTN1Q8IVN3 82 aa4.6□□□□□ -1.67
LSM8-202ENST00000411938 GTSF1LQ9H1H1 148 aa4.6□□□□□ -1.67
LSM8-202ENST00000411938 NDUFA12Q9UI09 145 aa4.6□□□□□ -1.67
LSM8-202ENST00000411938 TRGV2A0A075B6R0 118 aa4.59□□□□□ -1.67
LSM8-202ENST00000411938 TRAV8-3A0A0A6YYJ7 113 aa4.59□□□□□ -1.67
LSM8-202ENST00000411938 SPINK8P0C7L1 97 aa4.59□□□□□ -1.67
LSM8-202ENST00000411938 TIRAPP58753 221 aa4.59□□□□□ -1.67
LSM8-202ENST00000411938 RNASE13Q5GAN3 156 aaKnown RBP4.59□□□□□ -1.67
LSM8-202ENST00000411938 Q6ZTI0 123 aa4.59□□□□□ -1.67
LSM8-202ENST00000411938 WFDC10BQ8IUB3 73 aa4.59□□□□□ -1.67
LSM8-202ENST00000411938 ANKRD29Q8N6D5 301 aa4.59□□□□□ -1.67
LSM8-202ENST00000411938 GEMIN7Q9H840 131 aaKnown RBP4.59□□□□□ -1.67
LSM8-202ENST00000411938 ERG28Q9UKR5 140 aa4.59□□□□□ -1.67
LSM8-202ENST00000411938 IGHV3-38A0A0C4DH36 116 aa4.58□□□□□ -1.68
LSM8-202ENST00000411938 TRBV30A0A0K0K1B3 111 aa4.58□□□□□ -1.68
LSM8-202ENST00000411938 K7EQD1 137 aa4.58□□□□□ -1.68
LSM8-202ENST00000411938 NDUFA1O15239 70 aa4.58□□□□□ -1.68
LSM8-202ENST00000411938 SLC25A20O43772 301 aa4.58□□□□□ -1.68
LSM8-202ENST00000411938 SCGB1C2P0DMR2 95 aa4.58□□□□□ -1.68
LSM8-202ENST00000411938 RPL37AP61513 92 aaKnown RBP4.58□□□□□ -1.68
LSM8-202ENST00000411938 SMAGPQ0VAQ4 97 aa4.58□□□□□ -1.68
LSM8-202ENST00000411938 ATXN8Q156A1 80 aa4.58□□□□□ -1.68
LSM8-202ENST00000411938 LINC01620Q4KN68 170 aa4.58□□□□□ -1.68
LSM8-202ENST00000411938 LINC01600Q96MT4 127 aa4.58□□□□□ -1.68
LSM8-202ENST00000411938 TRAV4A0A0B4J268 109 aa4.57□□□□□ -1.68
LSM8-202ENST00000411938 TRBV10-1A0A0K0K1A3 114 aa4.57□□□□□ -1.68
LSM8-202ENST00000411938 C9JAW5 83 aa4.57□□□□□ -1.68
LSM8-202ENST00000411938 H7C2G1 150 aa4.57□□□□□ -1.68
LSM8-202ENST00000411938 IFITM1P13164 125 aa4.57□□□□□ -1.68
LSM8-202ENST00000411938 HERVK_113P63121 156 aa4.57□□□□□ -1.68
LSM8-202ENST00000411938 RPL36AP83881 106 aaKnown RBP4.57□□□□□ -1.68
LSM8-202ENST00000411938 MRPL23Q16540 153 aaKnown RBP4.57□□□□□ -1.68
LSM8-202ENST00000411938 FAM19A3Q7Z5A8 133 aa4.57□□□□□ -1.68
LSM8-202ENST00000411938 CIRBP-AS1Q8TBR5 109 aa4.57□□□□□ -1.68
LSM8-202ENST00000411938 RPL36ALQ969Q0 106 aaKnown RBP4.57□□□□□ -1.68
LSM8-202ENST00000411938 CARD19Q96LW7 228 aa4.57□□□□□ -1.68
LSM8-202ENST00000411938 CDIP1Q9H305 208 aa4.57□□□□□ -1.68
LSM8-202ENST00000411938 Q9HAA7 133 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms