RNA–Protein interactions for RNA: ENST00000411527.5

HLA-DQB2-229, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 1,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-229ENST00000411527 TEX43Q6ZNM6 134 aa8.41□□□□□ -1.06
HLA-DQB2-229ENST00000411527 LINC01561Q8N1V8 128 aa8.41□□□□□ -1.06
HLA-DQB2-229ENST00000411527 XAGE1AQ9HD64 81 aa8.41□□□□□ -1.06
HLA-DQB2-229ENST00000411527 TOMM7Q9P0U1 55 aa8.41□□□□□ -1.06
HLA-DQB2-229ENST00000411527 A0A1B0GXF2 115 aa8.4□□□□□ -1.06
HLA-DQB2-229ENST00000411527 C6orf226Q5I0X4 101 aa8.4□□□□□ -1.06
HLA-DQB2-229ENST00000411527 ZC2HC1BQ5TFG8 222 aa8.4□□□□□ -1.06
HLA-DQB2-229ENST00000411527 TMEM136Q6ZRR5 245 aa8.4□□□□□ -1.06
HLA-DQB2-229ENST00000411527 ORMDL3Q8N138 153 aa8.4□□□□□ -1.06
HLA-DQB2-229ENST00000411527 PRELID3AQ96N28 172 aa8.4□□□□□ -1.06
HLA-DQB2-229ENST00000411527 C12orf57Q99622 126 aa8.4□□□□□ -1.06
HLA-DQB2-229ENST00000411527 A0A087X002 238 aa8.39□□□□□ -1.07
HLA-DQB2-229ENST00000411527 C9JQL5 133 aa8.39□□□□□ -1.07
HLA-DQB2-229ENST00000411527 SMIM6P0DI80 62 aa8.39□□□□□ -1.07
HLA-DQB2-229ENST00000411527 Q6ZN92 141 aa8.39□□□□□ -1.07
HLA-DQB2-229ENST00000411527 TYMSOSQ8TAI1 123 aa8.39□□□□□ -1.07
HLA-DQB2-229ENST00000411527 C2orf88Q9BSF0 95 aa8.39□□□□□ -1.07
HLA-DQB2-229ENST00000411527 FAT4Q6V0I7 4981 aa8.38□□□□□ -1.07
HLA-DQB2-229ENST00000411527 LOC389332A0A1B0GUA5 103 aa8.38□□□□□ -1.07
HLA-DQB2-229ENST00000411527 CRYGAP11844 174 aa8.38□□□□□ -1.07
HLA-DQB2-229ENST00000411527 RPL28P46779 137 aaKnown RBP8.38□□□□□ -1.07
HLA-DQB2-229ENST00000411527 LCE2AQ5TA79 106 aaPredicted RBP8.38□□□□□ -1.07
HLA-DQB2-229ENST00000411527 LCE2BO14633 110 aa8.37□□□□□ -1.07
HLA-DQB2-229ENST00000411527 MT-ND4LP03901 98 aa8.37□□□□□ -1.07
HLA-DQB2-229ENST00000411527 LINC00173Q6ZV60 143 aa8.37□□□□□ -1.07
HLA-DQB2-229ENST00000411527 Q8IZM0 81 aa8.37□□□□□ -1.07
HLA-DQB2-229ENST00000411527 ALKBH7Q9BT30 221 aaPredicted RBP8.37□□□□□ -1.07
HLA-DQB2-229ENST00000411527 VCX2Q9H322 139 aa8.37□□□□□ -1.07
HLA-DQB2-229ENST00000411527 BCE1O60756 84 aa8.36□□□□□ -1.07
HLA-DQB2-229ENST00000411527 MRPL55Q7Z7F7 128 aaKnown RBP8.36□□□□□ -1.07
HLA-DQB2-229ENST00000411527 AMELXQ99217 191 aa8.36□□□□□ -1.07
HLA-DQB2-229ENST00000411527 CYSLTR1Q9Y271 337 aa8.36□□□□□ -1.07
HLA-DQB2-229ENST00000411527 PRSS47A8MTI9 375 aa8.35□□□□□ -1.07
HLA-DQB2-229ENST00000411527 SRSF3P84103 164 aaKnown RBP8.35□□□□□ -1.07
HLA-DQB2-229ENST00000411527 RHEBQ15382 184 aa8.35□□□□□ -1.07
HLA-DQB2-229ENST00000411527 C2orf66Q6UXQ4 117 aa8.35□□□□□ -1.07
HLA-DQB2-229ENST00000411527 CBLN2Q8IUK8 224 aa8.35□□□□□ -1.07
HLA-DQB2-229ENST00000411527 ANAPC11Q9NYG5 84 aa8.35□□□□□ -1.07
HLA-DQB2-229ENST00000411527 TP73-AS1Q9UF72 201 aa8.35□□□□□ -1.07
HLA-DQB2-229ENST00000411527 S100PP25815 95 aa8.34□□□□□ -1.07
HLA-DQB2-229ENST00000411527 MAP1LC3AQ9H492 121 aa8.34□□□□□ -1.07
HLA-DQB2-229ENST00000411527 RPS10P5Q9NQ39 176 aa8.34□□□□□ -1.07
HLA-DQB2-229ENST00000411527 RPL37AP8A6NKH3 93 aa8.33□□□□□ -1.08
HLA-DQB2-229ENST00000411527 F8VRH5 84 aa8.33□□□□□ -1.08
HLA-DQB2-229ENST00000411527 ADCYAP1P18509 176 aa8.33□□□□□ -1.08
HLA-DQB2-229ENST00000411527 ATP5L2Q7Z4Y8 100 aa8.33□□□□□ -1.08
HLA-DQB2-229ENST00000411527 FAM19A3Q7Z5A8 133 aa8.33□□□□□ -1.08
HLA-DQB2-229ENST00000411527 Q8N8P6 123 aa8.33□□□□□ -1.08
HLA-DQB2-229ENST00000411527 RETNLBQ9BQ08 111 aa8.33□□□□□ -1.08
HLA-DQB2-229ENST00000411527 CDKN2A-AS1Q9UH64 79 aa8.33□□□□□ -1.08
HLA-DQB2-229ENST00000411527 LINC00167Q96N53 147 aa8.32□□□□□ -1.08
HLA-DQB2-229ENST00000411527 LAMTOR2Q9Y2Q5 125 aa8.32□□□□□ -1.08
HLA-DQB2-229ENST00000411527 IGIPA6NJ69 53 aa8.31□□□□□ -1.08
HLA-DQB2-229ENST00000411527 COLCA2A8K830 154 aa8.31□□□□□ -1.08
HLA-DQB2-229ENST00000411527 NPSP0C0P6 89 aa8.31□□□□□ -1.08
HLA-DQB2-229ENST00000411527 HERVK_113P63121 156 aa8.31□□□□□ -1.08
HLA-DQB2-229ENST00000411527 KRTAP13-2Q52LG2 175 aa8.31□□□□□ -1.08
HLA-DQB2-229ENST00000411527 ORMDL2Q53FV1 153 aa8.31□□□□□ -1.08
HLA-DQB2-229ENST00000411527 GAGE10A6NGK3 116 aa8.3□□□□□ -1.08
HLA-DQB2-229ENST00000411527 SEC11AP67812 179 aa8.3□□□□□ -1.08
HLA-DQB2-229ENST00000411527 GEMIN7Q9H840 131 aaKnown RBP8.3□□□□□ -1.08
HLA-DQB2-229ENST00000411527 KRTAP9-6A0A140TA67 174 aa8.29□□□□□ -1.08
HLA-DQB2-229ENST00000411527 C5orf52A6NGY3 159 aa8.29□□□□□ -1.08
HLA-DQB2-229ENST00000411527 SNRPEP62304 92 aaKnown RBP8.29□□□□□ -1.08
HLA-DQB2-229ENST00000411527 CDIP1Q9H305 208 aa8.29□□□□□ -1.08
HLA-DQB2-229ENST00000411527 S100A2P29034 98 aa8.28□□□□□ -1.08
HLA-DQB2-229ENST00000411527 CXCL5P42830 114 aa8.28□□□□□ -1.08
HLA-DQB2-229ENST00000411527 UBE2AP49459 152 aa8.28□□□□□ -1.08
HLA-DQB2-229ENST00000411527 PAPPA-AS1Q5QFB9 102 aa8.28□□□□□ -1.08
HLA-DQB2-229ENST00000411527 LINC00304Q8N9R0 145 aa8.28□□□□□ -1.08
HLA-DQB2-229ENST00000411527 MUC17Q685J3 4493 aa8.27□□□□□ -1.08
HLA-DQB2-229ENST00000411527 K7EMI3 77 aa8.27□□□□□ -1.09
HLA-DQB2-229ENST00000411527 TPRXLQ17RH7 258 aa8.26□□□□□ -1.09
HLA-DQB2-229ENST00000411527 FAM229BQ4G0N7 80 aa8.26□□□□□ -1.09
HLA-DQB2-229ENST00000411527 KRTAP13-1Q8IUC0 172 aa8.26□□□□□ -1.09
HLA-DQB2-229ENST00000411527 IGLV7-46A0A075B6I9 117 aa8.25□□□□□ -1.09
HLA-DQB2-229ENST00000411527 IGKV2D-26A0A0A0MRZ7 120 aa8.25□□□□□ -1.09
HLA-DQB2-229ENST00000411527 SMIM1B2RUZ4 78 aa8.25□□□□□ -1.09
HLA-DQB2-229ENST00000411527 FABP9Q0Z7S8 132 aa8.25□□□□□ -1.09
HLA-DQB2-229ENST00000411527 PNRC1Q12796 327 aaPredicted RBP8.25□□□□□ -1.09
HLA-DQB2-229ENST00000411527 NKAPP1Q8N9T2 125 aa8.25□□□□□ -1.09
HLA-DQB2-229ENST00000411527 COX7B2Q8TF08 81 aa8.25□□□□□ -1.09
HLA-DQB2-229ENST00000411527 TIMM17AQ99595 171 aa8.25□□□□□ -1.09
HLA-DQB2-229ENST00000411527 NXT2Q9NPJ8 142 aaKnown RBP8.25□□□□□ -1.09
HLA-DQB2-229ENST00000411527 IGLV5-37A0A075B6J1 123 aa8.24□□□□□ -1.09
HLA-DQB2-229ENST00000411527 G0S2P27469 103 aa8.24□□□□□ -1.09
HLA-DQB2-229ENST00000411527 PDZD11Q5EBL8 140 aa8.24□□□□□ -1.09
HLA-DQB2-229ENST00000411527 IGKV2-28A0A075B6P5 120 aa8.23□□□□□ -1.09
HLA-DQB2-229ENST00000411527 IGKV2D-28P01615 120 aa8.23□□□□□ -1.09
HLA-DQB2-229ENST00000411527 TOMM6Q96B49 74 aa8.23□□□□□ -1.09
HLA-DQB2-229ENST00000411527 TINCRA0A1B0GVN0 87 aa8.21□□□□□ -1.1
HLA-DQB2-229ENST00000411527 PRLHP81277 87 aa8.21□□□□□ -1.1
HLA-DQB2-229ENST00000411527 ERASQ7Z444 233 aa8.21□□□□□ -1.1
HLA-DQB2-229ENST00000411527 SCGB3A1Q96QR1 104 aa8.21□□□□□ -1.1
HLA-DQB2-229ENST00000411527 SPINK8P0C7L1 97 aa8.2□□□□□ -1.1
HLA-DQB2-229ENST00000411527 FAM19A1Q7Z5A9 133 aa8.2□□□□□ -1.1
HLA-DQB2-229ENST00000411527 ANAPC16Q96DE5 110 aa8.2□□□□□ -1.1
HLA-DQB2-229ENST00000411527 IGLV5-45A0A087WSX0 123 aa8.19□□□□□ -1.1
HLA-DQB2-229ENST00000411527 LINC00587B1AMM8 73 aa8.19□□□□□ -1.1
HLA-DQB2-229ENST00000411527 PPDPFQ9H3Y8 114 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 130 ms