RNA–Protein interactions for RNA: ENST00000409727.5

CHMP3-204, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,851 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-204ENST00000409727 WWC2-AS2Q96NR7 200 aa8.31□□□□□ -1.08
CHMP3-204ENST00000409727 TGP01266 2768 aa8.3□□□□□ -1.08
CHMP3-204ENST00000409727 TMEM238C9JI98 176 aa8.3□□□□□ -1.08
CHMP3-204ENST00000409727 NPC2P61916 151 aa8.3□□□□□ -1.08
CHMP3-204ENST00000409727 HIGD2BQ4VC39 106 aa8.3□□□□□ -1.08
CHMP3-204ENST00000409727 ADAMTSL4-AS1Q5T5F5 129 aa8.3□□□□□ -1.08
CHMP3-204ENST00000409727 CEND1Q8N111 149 aa8.3□□□□□ -1.08
CHMP3-204ENST00000409727 C6orf223Q8N319 242 aa8.3□□□□□ -1.08
CHMP3-204ENST00000409727 PTTG1IPP53801 180 aa8.3□□□□□ -1.08
CHMP3-204ENST00000409727 FXYD2P54710 66 aa8.3□□□□□ -1.08
CHMP3-204ENST00000409727 LITAFQ99732 161 aa8.3□□□□□ -1.08
CHMP3-204ENST00000409727 STARD9Q9P2P6 4700 aa8.29□□□□□ -1.08
CHMP3-204ENST00000409727 HERV-K104P63124 156 aa8.29□□□□□ -1.08
CHMP3-204ENST00000409727 KIAA0087Q14695 138 aa8.29□□□□□ -1.08
CHMP3-204ENST00000409727 SMIM13P0DJ93 91 aa8.28□□□□□ -1.08
CHMP3-204ENST00000409727 CIRBPQ14011 172 aaKnown RBP8.28□□□□□ -1.08
CHMP3-204ENST00000409727 TAL2Q16559 108 aa8.28□□□□□ -1.08
CHMP3-204ENST00000409727 CASC10Q5T4H9 136 aa8.28□□□□□ -1.08
CHMP3-204ENST00000409727 SPANXB1Q9NS25 103 aaPredicted RBP8.28□□□□□ -1.08
CHMP3-204ENST00000409727 TENM2Q9NT68 2774 aa8.28□□□□□ -1.08
CHMP3-204ENST00000409727 DNAH7Q8WXX0 4024 aa8.28□□□□□ -1.08
CHMP3-204ENST00000409727 PFN2P35080 140 aa8.28□□□□□ -1.08
CHMP3-204ENST00000409727 RMI2Q96E14 147 aa8.28□□□□□ -1.08
CHMP3-204ENST00000409727 M0R2N4 97 aa8.27□□□□□ -1.09
CHMP3-204ENST00000409727 LORP23490 312 aaPredicted RBP8.27□□□□□ -1.09
CHMP3-204ENST00000409727 C15orf56Q8N910 161 aa8.27□□□□□ -1.09
CHMP3-204ENST00000409727 ZNF561-AS1K7EIQ3 104 aa8.26□□□□□ -1.09
CHMP3-204ENST00000409727 LECT2O14960 151 aa8.26□□□□□ -1.09
CHMP3-204ENST00000409727 LINC00158P58513 81 aa8.26□□□□□ -1.09
CHMP3-204ENST00000409727 UNQ6190/PRO20217Q6UXQ8 127 aa8.26□□□□□ -1.09
CHMP3-204ENST00000409727 MUSTN1Q8IVN3 82 aa8.26□□□□□ -1.09
CHMP3-204ENST00000409727 TM2D2Q9BX73 214 aa8.26□□□□□ -1.09
CHMP3-204ENST00000409727 NBDYA0A0U1RRE5 68 aa8.26□□□□□ -1.09
CHMP3-204ENST00000409727 C9orf116Q5BN46 136 aaPredicted RBP8.26□□□□□ -1.09
CHMP3-204ENST00000409727 COL5A1-AS1Q5SY13 56 aa8.26□□□□□ -1.09
CHMP3-204ENST00000409727 C10orf25Q5T742 122 aa8.26□□□□□ -1.09
CHMP3-204ENST00000409727 NHP2Q9NX24 153 aaKnown RBP8.26□□□□□ -1.09
CHMP3-204ENST00000409727 DYNC2H1Q8NCM8 4307 aaKnown RBP8.25□□□□□ -1.09
CHMP3-204ENST00000409727 K7ERJ3 54 aa8.25□□□□□ -1.09
CHMP3-204ENST00000409727 TIMM17BO60830 172 aa8.25□□□□□ -1.09
CHMP3-204ENST00000409727 CXCL5P42830 114 aa8.25□□□□□ -1.09
CHMP3-204ENST00000409727 SPANXDQ9BXN6 97 aa8.25□□□□□ -1.09
CHMP3-204ENST00000409727 SPANXCQ9NY87 97 aa8.25□□□□□ -1.09
CHMP3-204ENST00000409727 ERG28Q9UKR5 140 aa8.25□□□□□ -1.09
CHMP3-204ENST00000409727 A6NDN8 102 aa8.24□□□□□ -1.09
CHMP3-204ENST00000409727 EIF4EBP3O60516 100 aaPredicted RBP8.24□□□□□ -1.09
CHMP3-204ENST00000409727 SFTA2Q6UW10 78 aa8.24□□□□□ -1.09
CHMP3-204ENST00000409727 PLECQ15149 4684 aaKnown RBP8.24□□□□□ -1.09
CHMP3-204ENST00000409727 PSCAO43653 123 aa8.23□□□□□ -1.09
CHMP3-204ENST00000409727 LY6G6CO95867 125 aa8.23□□□□□ -1.09
CHMP3-204ENST00000409727 Q6ZVH6 145 aa8.23□□□□□ -1.09
CHMP3-204ENST00000409727 MIR7-3HGQ8N6C7 128 aa8.23□□□□□ -1.09
CHMP3-204ENST00000409727 NTN5Q8WTR8 489 aaPredicted RBP8.23□□□□□ -1.09
CHMP3-204ENST00000409727 RAB37Q96AX2 223 aa8.23□□□□□ -1.09
CHMP3-204ENST00000409727 USP17L23D6RBM5 183 aa8.23□□□□□ -1.09
CHMP3-204ENST00000409727 TTC32Q5I0X7 151 aa8.23□□□□□ -1.09
CHMP3-204ENST00000409727 CAMK2N2Q96S95 79 aa8.23□□□□□ -1.09
CHMP3-204ENST00000409727 A4D1N5 150 aa8.22□□□□□ -1.09
CHMP3-204ENST00000409727 LBHQ53QV2 105 aaPredicted RBP8.22□□□□□ -1.09
CHMP3-204ENST00000409727 RPL24P83731 157 aaKnown RBP8.21□□□□□ -1.09
CHMP3-204ENST00000409727 LINC00308Q8TCZ7 52 aa8.21□□□□□ -1.09
CHMP3-204ENST00000409727 COX11Q9Y6N1 276 aa8.21□□□□□ -1.09
CHMP3-204ENST00000409727 GVQW2A0A096LPI5 108 aaPredicted RBP8.21□□□□□ -1.1
CHMP3-204ENST00000409727 SOSTDC1Q6X4U4 206 aa8.21□□□□□ -1.1
CHMP3-204ENST00000409727 Q6ZRU5 148 aa8.2□□□□□ -1.1
CHMP3-204ENST00000409727 C6orf48Q9UBA6 75 aa8.2□□□□□ -1.1
CHMP3-204ENST00000409727 WFDC2Q14508 124 aa8.19□□□□□ -1.1
CHMP3-204ENST00000409727 NAA38Q9BRA0 125 aaKnown RBP8.19□□□□□ -1.1
CHMP3-204ENST00000409727 C3orf84H3BNL1 204 aa8.19□□□□□ -1.1
CHMP3-204ENST00000409727 TAX1BP3O14907 124 aa8.19□□□□□ -1.1
CHMP3-204ENST00000409727 IFITM1P13164 125 aa8.19□□□□□ -1.1
CHMP3-204ENST00000409727 A0A1B0GV90 55 aa8.18□□□□□ -1.1
CHMP3-204ENST00000409727 CFC1BP0CG36 223 aa8.18□□□□□ -1.1
CHMP3-204ENST00000409727 CFC1P0CG37 223 aa8.18□□□□□ -1.1
CHMP3-204ENST00000409727 C2orf48Q96LS8 159 aa8.18□□□□□ -1.1
CHMP3-204ENST00000409727 SYCNQ0VAF6 134 aa8.17□□□□□ -1.1
CHMP3-204ENST00000409727 COX17Q14061 63 aa8.17□□□□□ -1.1
CHMP3-204ENST00000409727 LINC00476Q8WZB0 136 aa8.17□□□□□ -1.1
CHMP3-204ENST00000409727 DNAH1Q9P2D7 4330 aa8.17□□□□□ -1.1
CHMP3-204ENST00000409727 TRBV30A0A0K0K1B3 111 aa8.16□□□□□ -1.1
CHMP3-204ENST00000409727 SLPIP03973 132 aa8.16□□□□□ -1.1
CHMP3-204ENST00000409727 COPS9Q8WXC6 57 aa8.16□□□□□ -1.1
CHMP3-204ENST00000409727 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.15□□□□□ -1.1
CHMP3-204ENST00000409727 A0A1B0GWB2 263 aa8.15□□□□□ -1.1
CHMP3-204ENST00000409727 H7C2G1 150 aa8.15□□□□□ -1.1
CHMP3-204ENST00000409727 CARD19Q96LW7 228 aa8.15□□□□□ -1.1
CHMP3-204ENST00000409727 SND1-IT1Q9HBX3 110 aa8.15□□□□□ -1.1
CHMP3-204ENST00000409727 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.14□□□□□ -1.11
CHMP3-204ENST00000409727 H3BUT2 72 aa8.14□□□□□ -1.11
CHMP3-204ENST00000409727 Q6ZR54 194 aa8.14□□□□□ -1.11
CHMP3-204ENST00000409727 Q6ZRN7 208 aaPredicted RBP8.14□□□□□ -1.11
CHMP3-204ENST00000409727 GAGE2EQ4V326 116 aa8.13□□□□□ -1.11
CHMP3-204ENST00000409727 XAGE1AQ9HD64 81 aa8.13□□□□□ -1.11
CHMP3-204ENST00000409727 GAGE2DQ9UEU5 116 aa8.13□□□□□ -1.11
CHMP3-204ENST00000409727 PRO1854Q9UHT4 67 aa8.13□□□□□ -1.11
CHMP3-204ENST00000409727 A0A0B4J2C4 111 aa8.13□□□□□ -1.11
CHMP3-204ENST00000409727 C9orf118A6NHY6 69 aa8.13□□□□□ -1.11
CHMP3-204ENST00000409727 TNP2Q05952 138 aa8.13□□□□□ -1.11
CHMP3-204ENST00000409727 F8WDY8 70 aa8.12□□□□□ -1.11
CHMP3-204ENST00000409727 TSPAN13O95857 204 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms