RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 A0A1B0GXF2 115 aa6.05□□□□□ -1.44
SCN9A-203ENST00000409672 IGLV8-61A0A075B6I0 122 aa6.05□□□□□ -1.44
SCN9A-203ENST00000409672 SOSTDC1Q6X4U4 206 aa6.05□□□□□ -1.44
SCN9A-203ENST00000409672 LINC00694P0DN24 101 aa6.04□□□□□ -1.44
SCN9A-203ENST00000409672 HIGD1BQ9P298 99 aa6.04□□□□□ -1.44
SCN9A-203ENST00000409672 TLN1Q9Y490 2541 aaKnown RBP6.04□□□□□ -1.44
SCN9A-203ENST00000409672 MRPS12O15235 138 aaKnown RBP6.04□□□□□ -1.44
SCN9A-203ENST00000409672 MOBPQ13875 183 aa6.04□□□□□ -1.44
SCN9A-203ENST00000409672 BRWD1-AS2P59051 145 aa6.04□□□□□ -1.44
SCN9A-203ENST00000409672 C5orf42Q9H799 3197 aa6.04□□□□□ -1.44
SCN9A-203ENST00000409672 FHL3Q13643 280 aa6.04□□□□□ -1.44
SCN9A-203ENST00000409672 FAM240AA0A1B0GVK7 77 aa6.03□□□□□ -1.44
SCN9A-203ENST00000409672 CRYGAP11844 174 aa6.03□□□□□ -1.44
SCN9A-203ENST00000409672 COX6B2Q6YFQ2 88 aa6.03□□□□□ -1.44
SCN9A-203ENST00000409672 CDC42SE2Q9NRR3 84 aa6.03□□□□□ -1.44
SCN9A-203ENST00000409672 ODF3L2Q3SX64 289 aa6.03□□□□□ -1.44
SCN9A-203ENST00000409672 A0A087WSZ3 146 aa6.03□□□□□ -1.44
SCN9A-203ENST00000409672 C11orf21Q9P2W6 132 aa6.02□□□□□ -1.44
SCN9A-203ENST00000409672 Q6ZPA2 131 aa6.02□□□□□ -1.45
SCN9A-203ENST00000409672 HCG22E2RYF7 251 aa6.02□□□□□ -1.45
SCN9A-203ENST00000409672 EBI3Q14213 229 aa6.02□□□□□ -1.45
SCN9A-203ENST00000409672 LYPD5Q6UWN5 251 aa6.02□□□□□ -1.45
SCN9A-203ENST00000409672 IGLV1-40P01703 118 aa6.01□□□□□ -1.45
SCN9A-203ENST00000409672 PSPHP1O15172 72 aa6.01□□□□□ -1.45
SCN9A-203ENST00000409672 COX17Q14061 63 aa6.01□□□□□ -1.45
SCN9A-203ENST00000409672 FHL2Q14192 279 aa6.01□□□□□ -1.45
SCN9A-203ENST00000409672 A0A087WYN8 130 aa6.01□□□□□ -1.45
SCN9A-203ENST00000409672 LINC00575Q6W349 94 aa6.01□□□□□ -1.45
SCN9A-203ENST00000409672 NRACQ8N912 160 aa6.01□□□□□ -1.45
SCN9A-203ENST00000409672 Q6ZSN1 163 aa6□□□□□ -1.45
SCN9A-203ENST00000409672 TYMSOSQ8TAI1 123 aa6□□□□□ -1.45
SCN9A-203ENST00000409672 NHLRC4P0CG21 123 aaPredicted RBP6□□□□□ -1.45
SCN9A-203ENST00000409672 TRBV30A0A0K0K1B3 111 aa6□□□□□ -1.45
SCN9A-203ENST00000409672 H0Y9P7 68 aa6□□□□□ -1.45
SCN9A-203ENST00000409672 Q6ZRU5 148 aa6□□□□□ -1.45
SCN9A-203ENST00000409672 JMJD1CQ15652 2540 aa6□□□□□ -1.45
SCN9A-203ENST00000409672 XIRP2A4UGR9 3374 aa5.99□□□□□ -1.45
SCN9A-203ENST00000409672 IGLV1-51P01701 117 aa5.99□□□□□ -1.45
SCN9A-203ENST00000409672 Q8IZM0 81 aa5.99□□□□□ -1.45
SCN9A-203ENST00000409672 PHF5AQ7RTV0 110 aaKnown RBP5.99□□□□□ -1.45
SCN9A-203ENST00000409672 LIMD2Q9BT23 127 aa5.99□□□□□ -1.45
SCN9A-203ENST00000409672 ZNF580Q9UK33 172 aa5.98□□□□□ -1.45
SCN9A-203ENST00000409672 IGF2RP11717 2491 aa5.98□□□□□ -1.45
SCN9A-203ENST00000409672 ZNF295-AS1Q8N0V1 137 aa5.98□□□□□ -1.45
SCN9A-203ENST00000409672 FSTL3O95633 263 aa5.98□□□□□ -1.45
SCN9A-203ENST00000409672 SMR3BP02814 79 aaPredicted RBP5.98□□□□□ -1.45
SCN9A-203ENST00000409672 SMCR5Q8TEV8 140 aa5.98□□□□□ -1.45
SCN9A-203ENST00000409672 A0A1W2PPR1 153 aa5.97□□□□□ -1.45
SCN9A-203ENST00000409672 hDV103S1A0JD37 113 aa5.97□□□□□ -1.45
SCN9A-203ENST00000409672 C22orf24Q9Y442 160 aa5.97□□□□□ -1.45
SCN9A-203ENST00000409672 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.97□□□□□ -1.45
SCN9A-203ENST00000409672 Q8N814 137 aa5.97□□□□□ -1.45
SCN9A-203ENST00000409672 KLLNB2CW77 178 aa5.96□□□□□ -1.45
SCN9A-203ENST00000409672 PRO3102Q9H379 93 aa5.96□□□□□ -1.46
SCN9A-203ENST00000409672 UQCRQO14949 82 aa5.96□□□□□ -1.46
SCN9A-203ENST00000409672 RTL8CO15255 209 aa5.96□□□□□ -1.46
SCN9A-203ENST00000409672 TLN2Q9Y4G6 2542 aa5.95□□□□□ -1.46
SCN9A-203ENST00000409672 ACANP16112 2415 aa5.95□□□□□ -1.46
SCN9A-203ENST00000409672 Q8N6K4 173 aa5.95□□□□□ -1.46
SCN9A-203ENST00000409672 Q96NJ1 140 aa5.95□□□□□ -1.46
SCN9A-203ENST00000409672 EGFEM1PQ0D2K5 195 aa5.95□□□□□ -1.46
SCN9A-203ENST00000409672 NTM-AS1Q6ZSK4 140 aa5.95□□□□□ -1.46
SCN9A-203ENST00000409672 F8P00451 2351 aa5.95□□□□□ -1.46
SCN9A-203ENST00000409672 A0A087WVE0 104 aa5.94□□□□□ -1.46
SCN9A-203ENST00000409672 LINC00574Q9H8X3 128 aa5.94□□□□□ -1.46
SCN9A-203ENST00000409672 V9GYY9 64 aa5.94□□□□□ -1.46
SCN9A-203ENST00000409672 C9orf92A6NGG3 77 aa5.94□□□□□ -1.46
SCN9A-203ENST00000409672 KRTAP24-1Q3LI83 254 aa5.94□□□□□ -1.46
SCN9A-203ENST00000409672 Q8N3U1 123 aa5.94□□□□□ -1.46
SCN9A-203ENST00000409672 EIF4EBP1Q13541 118 aaPredicted RBP5.93□□□□□ -1.46
SCN9A-203ENST00000409672 PMAIP1Q13794 54 aa5.93□□□□□ -1.46
SCN9A-203ENST00000409672 C16orf95Q9H693 158 aa5.93□□□□□ -1.46
SCN9A-203ENST00000409672 MRPS36P82909 103 aaKnown RBP5.93□□□□□ -1.46
SCN9A-203ENST00000409672 BPTFQ12830 3046 aa5.93□□□□□ -1.46
SCN9A-203ENST00000409672 LINC00315P59091 139 aa5.93□□□□□ -1.46
SCN9A-203ENST00000409672 MUC7Q8TAX7 377 aa5.92□□□□□ -1.46
SCN9A-203ENST00000409672 P0C879 139 aa5.92□□□□□ -1.46
SCN9A-203ENST00000409672 CHCHD7Q9BUK0 85 aa5.92□□□□□ -1.46
SCN9A-203ENST00000409672 CEP350Q5VT06 3117 aa5.92□□□□□ -1.46
SCN9A-203ENST00000409672 RPL37AP61513 92 aaKnown RBP5.92□□□□□ -1.46
SCN9A-203ENST00000409672 CCDC179H3BU77 68 aa5.92□□□□□ -1.46
SCN9A-203ENST00000409672 NAV2Q8IVL1 2488 aa5.92□□□□□ -1.46
SCN9A-203ENST00000409672 CSDC2Q9Y534 153 aaKnown RBP5.91□□□□□ -1.46
SCN9A-203ENST00000409672 SMIM1B2RUZ4 78 aa5.91□□□□□ -1.46
SCN9A-203ENST00000409672 ATP5EP2Q5VTU8 51 aa5.91□□□□□ -1.46
SCN9A-203ENST00000409672 KIAA0087Q14695 138 aa5.91□□□□□ -1.46
SCN9A-203ENST00000409672 IMUPQ9GZP8 106 aa5.91□□□□□ -1.46
SCN9A-203ENST00000409672 ZNF462Q96JM2 2506 aa5.9□□□□□ -1.46
SCN9A-203ENST00000409672 ABCA12Q86UK0 2595 aa5.9□□□□□ -1.46
SCN9A-203ENST00000409672 C11orf1Q9H5F2 150 aa5.9□□□□□ -1.46
SCN9A-203ENST00000409672 ADAMTSL4-AS1Q5T5F5 129 aa5.9□□□□□ -1.47
SCN9A-203ENST00000409672 ATP11AUNQ6ZP68 121 aa5.9□□□□□ -1.47
SCN9A-203ENST00000409672 LINC00313P59037 77 aa5.89□□□□□ -1.47
SCN9A-203ENST00000409672 NCOR2Q9Y618 2525 aa5.89□□□□□ -1.47
SCN9A-203ENST00000409672 POLR2KP53803 58 aaKnown RBP5.89□□□□□ -1.47
SCN9A-203ENST00000409672 CRIP3Q6Q6R5 217 aa5.89□□□□□ -1.47
SCN9A-203ENST00000409672 TRBV7-7A0A0K0K1E9 115 aa5.89□□□□□ -1.47
SCN9A-203ENST00000409672 NDUFC1O43677 76 aa5.89□□□□□ -1.47
SCN9A-203ENST00000409672 ACYP2P14621 99 aa5.88□□□□□ -1.47
SCN9A-203ENST00000409672 CDIP1Q9H305 208 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms