RNA–Protein interactions for RNA: ENST00000409115.7

PTMA-202, Transcript of prothymosin alpha, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PTMA, Length 1,221 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTMA-202ENST00000409115 SMKR1H3BMG3 65 aa6.3□□□□□ -1.4
PTMA-202ENST00000409115 C10orf126Q8N4M7 172 aa6.3□□□□□ -1.4
PTMA-202ENST00000409115 NAA38Q9BRA0 125 aaKnown RBP6.3□□□□□ -1.4
PTMA-202ENST00000409115 TRAV4A0A0B4J268 109 aa6.29□□□□□ -1.4
PTMA-202ENST00000409115 H3BMG7 143 aa6.29□□□□□ -1.4
PTMA-202ENST00000409115 M0R381 172 aa6.29□□□□□ -1.4
PTMA-202ENST00000409115 SPANXN1Q5VSR9 72 aa6.29□□□□□ -1.4
PTMA-202ENST00000409115 Q6ZSA8 131 aa6.29□□□□□ -1.4
PTMA-202ENST00000409115 SCXQ7RTU7 201 aa6.29□□□□□ -1.4
PTMA-202ENST00000409115 C20orf78Q9BR46 151 aa6.29□□□□□ -1.4
PTMA-202ENST00000409115 SMIM2Q9BVW6 85 aa6.29□□□□□ -1.4
PTMA-202ENST00000409115 GTSF1LQ9H1H1 148 aa6.29□□□□□ -1.4
PTMA-202ENST00000409115 CYSLTR1Q9Y271 337 aa6.29□□□□□ -1.4
PTMA-202ENST00000409115 TRBV20-1A0A075B6N2 111 aa6.28□□□□□ -1.4
PTMA-202ENST00000409115 IGKV2D-26A0A0A0MRZ7 120 aa6.28□□□□□ -1.4
PTMA-202ENST00000409115 IGHV3-73A0A0B4J1V6 119 aa6.28□□□□□ -1.4
PTMA-202ENST00000409115 IBA57-AS1B1ANH7 110 aa6.28□□□□□ -1.4
PTMA-202ENST00000409115 APOMO95445 188 aa6.28□□□□□ -1.4
PTMA-202ENST00000409115 KRTAP10-4P60372 401 aaPredicted RBP6.28□□□□□ -1.4
PTMA-202ENST00000409115 SMAGPQ0VAQ4 97 aa6.28□□□□□ -1.4
PTMA-202ENST00000409115 LINC01556Q5JQF7 62 aa6.28□□□□□ -1.4
PTMA-202ENST00000409115 SCGB3A1Q96QR1 104 aa6.28□□□□□ -1.4
PTMA-202ENST00000409115 MRPL35Q9NZE8 188 aaKnown RBP6.28□□□□□ -1.4
PTMA-202ENST00000409115 TRBV7-3A0A075B6L6 115 aa6.27□□□□□ -1.41
PTMA-202ENST00000409115 IGKV2D-30A0A075B6S6 120 aa6.27□□□□□ -1.41
PTMA-202ENST00000409115 TMEM262E9PQX1 116 aa6.27□□□□□ -1.41
PTMA-202ENST00000409115 K7ERJ3 54 aa6.27□□□□□ -1.41
PTMA-202ENST00000409115 GNRH2O43555 120 aa6.27□□□□□ -1.41
PTMA-202ENST00000409115 GATA1P15976 413 aaPredicted RBP6.27□□□□□ -1.41
PTMA-202ENST00000409115 SCGB1D4Q6XE38 83 aa6.27□□□□□ -1.41
PTMA-202ENST00000409115 RASL10AQ92737 203 aa6.27□□□□□ -1.41
PTMA-202ENST00000409115 LRP1Q07954 4544 aaKnown RBP6.26□□□□□ -1.41
PTMA-202ENST00000409115 ZNF80P51504 273 aaPredicted RBP6.26□□□□□ -1.41
PTMA-202ENST00000409115 CKS1BP61024 79 aa6.26□□□□□ -1.41
PTMA-202ENST00000409115 FAM159AQ6UWV7 190 aa6.26□□□□□ -1.41
PTMA-202ENST00000409115 DEFB104AQ8WTQ1 72 aa6.26□□□□□ -1.41
PTMA-202ENST00000409115 PPDPFLQ8WWR9 84 aa6.26□□□□□ -1.41
PTMA-202ENST00000409115 TOMM6Q96B49 74 aa6.26□□□□□ -1.41
PTMA-202ENST00000409115 DNAJC30Q96LL9 226 aa6.26□□□□□ -1.41
PTMA-202ENST00000409115 DPH3P1Q9H4G8 78 aa6.26□□□□□ -1.41
PTMA-202ENST00000409115 SPANXA1Q9NS26 97 aa6.26□□□□□ -1.41
PTMA-202ENST00000409115 DNAH8Q96JB1 4490 aa6.25□□□□□ -1.41
PTMA-202ENST00000409115 TRAV21A0A0B4J279 112 aa6.25□□□□□ -1.41
PTMA-202ENST00000409115 ASIPP42127 132 aa6.25□□□□□ -1.41
PTMA-202ENST00000409115 RPL32P62910 135 aaKnown RBP6.25□□□□□ -1.41
PTMA-202ENST00000409115 SRSF9Q13242 221 aaKnown RBP eCLIP6.25□□□□□ -1.412e-24■■■■□ 22.1
PTMA-202ENST00000409115 ETDBQ3ZM63 59 aa6.25□□□□□ -1.41
PTMA-202ENST00000409115 SPXQ9BT56 116 aa6.25□□□□□ -1.41
PTMA-202ENST00000409115 TRBV7-9A0A0J9YWB2 115 aa6.24□□□□□ -1.41
PTMA-202ENST00000409115 ZNF815PA8K554 130 aa6.24□□□□□ -1.41
PTMA-202ENST00000409115 M0QXV9 152 aa6.24□□□□□ -1.41
PTMA-202ENST00000409115 M0R2P5 195 aa6.24□□□□□ -1.41
PTMA-202ENST00000409115 S100A4P26447 101 aaKnown RBP6.24□□□□□ -1.41
PTMA-202ENST00000409115 DAZ4Q86SG3 579 aaKnown RBP6.24□□□□□ -1.41
PTMA-202ENST00000409115 SLC25A29Q8N8R3 303 aa6.24□□□□□ -1.41
PTMA-202ENST00000409115 BAALCQ8WXS3 180 aa6.24□□□□□ -1.41
PTMA-202ENST00000409115 TMEM141Q96I45 108 aa6.24□□□□□ -1.41
PTMA-202ENST00000409115 DAZ3Q9NR90 486 aaKnown RBP6.24□□□□□ -1.41
PTMA-202ENST00000409115 A8MWV9 139 aa6.23□□□□□ -1.41
PTMA-202ENST00000409115 LELP1Q5T871 98 aa6.23□□□□□ -1.41
PTMA-202ENST00000409115 PRADC1Q9BSG0 188 aa6.23□□□□□ -1.41
PTMA-202ENST00000409115 PRO0461Q9UI25 63 aa6.23□□□□□ -1.41
PTMA-202ENST00000409115 UBE2D1P51668 147 aa6.22□□□□□ -1.41
PTMA-202ENST00000409115 RHOHQ15669 191 aa6.22□□□□□ -1.41
PTMA-202ENST00000409115 CFAP126Q5VTH2 177 aa6.22□□□□□ -1.41
PTMA-202ENST00000409115 TEN1Q86WV5 123 aa6.22□□□□□ -1.41
PTMA-202ENST00000409115 PHLDA3Q9Y5J5 127 aa6.22□□□□□ -1.41
PTMA-202ENST00000409115 PKHD1L1Q86WI1 4243 aa6.21□□□□□ -1.41
PTMA-202ENST00000409115 IGKV3D-20A0A0C4DH25 116 aa6.21□□□□□ -1.42
PTMA-202ENST00000409115 LOC107984156A0A0G2JMH3 177 aa6.21□□□□□ -1.42
PTMA-202ENST00000409115 H3BVH4 76 aa6.21□□□□□ -1.42
PTMA-202ENST00000409115 RS1O15537 224 aa6.21□□□□□ -1.42
PTMA-202ENST00000409115 SPINK8P0C7L1 97 aa6.21□□□□□ -1.42
PTMA-202ENST00000409115 PSMB2P49721 201 aa6.21□□□□□ -1.42
PTMA-202ENST00000409115 GAGE5Q13069 117 aa6.21□□□□□ -1.42
PTMA-202ENST00000409115 C2orf66Q6UXQ4 117 aa6.21□□□□□ -1.42
PTMA-202ENST00000409115 SH2D6Q7Z4S9 175 aa6.21□□□□□ -1.42
PTMA-202ENST00000409115 ARL17AQ8IVW1 177 aa6.21□□□□□ -1.42
PTMA-202ENST00000409115 CIRBP-AS1Q8TBR5 109 aa6.21□□□□□ -1.42
PTMA-202ENST00000409115 KIR2DL4Q99706 377 aa6.21□□□□□ -1.42
PTMA-202ENST00000409115 TTTY13Q9BZ97 58 aa6.21□□□□□ -1.42
PTMA-202ENST00000409115 GEMIN7Q9H840 131 aaKnown RBP6.21□□□□□ -1.42
PTMA-202ENST00000409115 Q9UF83 564 aa6.21□□□□□ -1.42
PTMA-202ENST00000409115 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.2□□□□□ -1.42
PTMA-202ENST00000409115 C11orf86A6NJI1 115 aa6.2□□□□□ -1.42
PTMA-202ENST00000409115 MGPP08493 103 aa6.2□□□□□ -1.42
PTMA-202ENST00000409115 VPREB1P12018 145 aa6.2□□□□□ -1.42
PTMA-202ENST00000409115 LGALS3P17931 250 aaKnown RBP6.2□□□□□ -1.42
PTMA-202ENST00000409115 UBE2D3P61077 147 aa6.2□□□□□ -1.42
PTMA-202ENST00000409115 UBE2D2P62837 147 aa6.2□□□□□ -1.42
PTMA-202ENST00000409115 PMVKQ15126 192 aa6.2□□□□□ -1.42
PTMA-202ENST00000409115 ZNF876PQ49A33 203 aa6.2□□□□□ -1.42
PTMA-202ENST00000409115 TIMM17AQ99595 171 aa6.2□□□□□ -1.42
PTMA-202ENST00000409115 FAT3Q8TDW7 4589 aa6.19□□□□□ -1.42
PTMA-202ENST00000409115 TSPAN13O95857 204 aa6.19□□□□□ -1.42
PTMA-202ENST00000409115 LINC00694P0DN24 101 aa6.19□□□□□ -1.42
PTMA-202ENST00000409115 C9orf85Q96MD7 179 aa6.19□□□□□ -1.42
PTMA-202ENST00000409115 JPT2Q9H910 190 aa6.19□□□□□ -1.42
PTMA-202ENST00000409115 HMCN2Q8NDA2 5059 aa6.18□□□□□ -1.42
PTMA-202ENST00000409115 IGKV2D-24A0A075B6R9 120 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms