RNA–Protein interactions for RNA: ENST00000407595.2

CCDC85A-201, Transcript of coiled-coil domain containing 85A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC85A, Length 3,982 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85A-201ENST00000407595 UBL5Q9BZL1 73 aa11.27□□□□□ -0.61
CCDC85A-201ENST00000407595 TIMM17BO60830 172 aa11.26□□□□□ -0.61
CCDC85A-201ENST00000407595 NHLRC4P0CG21 123 aaPredicted RBP11.26□□□□□ -0.61
CCDC85A-201ENST00000407595 SVIPQ8NHG7 77 aa11.26□□□□□ -0.61
CCDC85A-201ENST00000407595 EIF4EBP3O60516 100 aaPredicted RBP11.26□□□□□ -0.61
CCDC85A-201ENST00000407595 Q8N2B8 174 aa11.26□□□□□ -0.61
CCDC85A-201ENST00000407595 A0A096LNT2 108 aa11.26□□□□□ -0.61
CCDC85A-201ENST00000407595 NSD1Q96L73 2696 aaPredicted RBP11.25□□□□□ -0.61
CCDC85A-201ENST00000407595 KLK12Q9UKR0 248 aa11.25□□□□□ -0.61
CCDC85A-201ENST00000407595 FAM240AA0A1B0GVK7 77 aa11.25□□□□□ -0.61
CCDC85A-201ENST00000407595 SMIM1B2RUZ4 78 aa11.24□□□□□ -0.61
CCDC85A-201ENST00000407595 J3KT08 172 aa11.24□□□□□ -0.61
CCDC85A-201ENST00000407595 TRAV23DV6A0A075B6W5 121 aa11.23□□□□□ -0.61
CCDC85A-201ENST00000407595 M0QXV9 152 aa11.22□□□□□ -0.61
CCDC85A-201ENST00000407595 IGLV1-51P01701 117 aa11.22□□□□□ -0.61
CCDC85A-201ENST00000407595 PRO0255Q9UI72 69 aa11.22□□□□□ -0.61
CCDC85A-201ENST00000407595 MXRA5Q9NR99 2828 aa11.22□□□□□ -0.61
CCDC85A-201ENST00000407595 UBE2DNLQ8IWF7 75 aa11.22□□□□□ -0.61
CCDC85A-201ENST00000407595 A0A087WVE0 104 aa11.22□□□□□ -0.61
CCDC85A-201ENST00000407595 TRBV10-1A0A0K0K1A3 114 aa11.22□□□□□ -0.61
CCDC85A-201ENST00000407595 SMIM11BQ8TCY0 68 aa11.22□□□□□ -0.61
CCDC85A-201ENST00000407595 LINC00526Q96FQ7 95 aa11.22□□□□□ -0.61
CCDC85A-201ENST00000407595 IMUPQ9GZP8 106 aa11.21□□□□□ -0.61
CCDC85A-201ENST00000407595 RETNQ9HD89 108 aa11.21□□□□□ -0.61
CCDC85A-201ENST00000407595 BRI3O95415 125 aa11.21□□□□□ -0.62
CCDC85A-201ENST00000407595 IGKV2D-24A0A075B6R9 120 aa11.2□□□□□ -0.62
CCDC85A-201ENST00000407595 LITAFQ99732 161 aa11.2□□□□□ -0.62
CCDC85A-201ENST00000407595 HIVEP1P15822 2718 aa11.2□□□□□ -0.62
CCDC85A-201ENST00000407595 LOC107984640A0A0U1RRK4 108 aa11.19□□□□□ -0.62
CCDC85A-201ENST00000407595 LINC00269Q8N2A0 174 aa11.19□□□□□ -0.62
CCDC85A-201ENST00000407595 CDC42SE2Q9NRR3 84 aa11.19□□□□□ -0.62
CCDC85A-201ENST00000407595 ZNF561-AS1K7EIQ3 104 aa11.18□□□□□ -0.62
CCDC85A-201ENST00000407595 PPDPFQ9H3Y8 114 aa11.18□□□□□ -0.62
CCDC85A-201ENST00000407595 IGHV4-28A0A0C4DH34 117 aa11.18□□□□□ -0.62
CCDC85A-201ENST00000407595 FSHBP01225 129 aa11.18□□□□□ -0.62
CCDC85A-201ENST00000407595 WFDC9Q8NEX5 89 aa11.18□□□□□ -0.62
CCDC85A-201ENST00000407595 COX7CP15954 63 aa11.18□□□□□ -0.62
CCDC85A-201ENST00000407595 SOSTDC1Q6X4U4 206 aa11.17□□□□□ -0.62
CCDC85A-201ENST00000407595 A0A087WYN8 130 aa11.17□□□□□ -0.62
CCDC85A-201ENST00000407595 GHRHP01286 108 aa11.17□□□□□ -0.62
CCDC85A-201ENST00000407595 CCL18P55774 89 aa11.17□□□□□ -0.62
CCDC85A-201ENST00000407595 IGHV4-30-4P0DP06 118 aa11.16□□□□□ -0.62
CCDC85A-201ENST00000407595 C20orf197Q8N268 126 aa11.15□□□□□ -0.62
CCDC85A-201ENST00000407595 SPENQ96T58 3664 aaKnown RBP11.15□□□□□ -0.62
CCDC85A-201ENST00000407595 USP17L23D6RBM5 183 aa11.15□□□□□ -0.63
CCDC85A-201ENST00000407595 PSCAO43653 123 aa11.15□□□□□ -0.63
CCDC85A-201ENST00000407595 FAM218AQ96MZ4 157 aa11.15□□□□□ -0.63
CCDC85A-201ENST00000407595 KLK9Q2XQG4 91 aa11.14□□□□□ -0.63
CCDC85A-201ENST00000407595 KRTAP1-3Q8IUG1 177 aa11.14□□□□□ -0.63
CCDC85A-201ENST00000407595 TRBV7-7A0A0K0K1E9 115 aa11.14□□□□□ -0.63
CCDC85A-201ENST00000407595 RPL18AQ02543 176 aaKnown RBP11.13□□□□□ -0.63
CCDC85A-201ENST00000407595 ENHOQ6UWT2 76 aa11.13□□□□□ -0.63
CCDC85A-201ENST00000407595 LINC00337Q8N6G1 96 aa11.13□□□□□ -0.63
CCDC85A-201ENST00000407595 DSCR8Q96T75 97 aa11.13□□□□□ -0.63
CCDC85A-201ENST00000407595 CXCL5P42830 114 aa11.13□□□□□ -0.63
CCDC85A-201ENST00000407595 TRBV6-8A0A0A6YYG3 113 aa11.12□□□□□ -0.63
CCDC85A-201ENST00000407595 PRR3P79522 188 aaKnown RBP11.12□□□□□ -0.63
CCDC85A-201ENST00000407595 IGLV4-60A0A075B6I1 120 aa11.11□□□□□ -0.63
CCDC85A-201ENST00000407595 IBA57-AS1B1ANH7 110 aa11.11□□□□□ -0.63
CCDC85A-201ENST00000407595 HIGD2BQ4VC39 106 aa11.11□□□□□ -0.63
CCDC85A-201ENST00000407595 JMJD7-PLA2G4BH0Y9G9 81 aa11.11□□□□□ -0.63
CCDC85A-201ENST00000407595 CR1P17927 2039 aa11.11□□□□□ -0.63
CCDC85A-201ENST00000407595 RPL28P46779 137 aaKnown RBP11.1□□□□□ -0.63
CCDC85A-201ENST00000407595 LINC00846Q9NV44 126 aa11.1□□□□□ -0.63
CCDC85A-201ENST00000407595 SERP2Q8N6R1 65 aa11.09□□□□□ -0.63
CCDC85A-201ENST00000407595 NTM-AS1Q6ZSK4 140 aa11.09□□□□□ -0.63
CCDC85A-201ENST00000407595 IGLV5-39A0A0G2JS06 123 aa11.09□□□□□ -0.63
CCDC85A-201ENST00000407595 TMEM256-PLSCR3K7ERE1 68 aa11.09□□□□□ -0.63
CCDC85A-201ENST00000407595 C6orf99Q4VX62 202 aa11.08□□□□□ -0.64
CCDC85A-201ENST00000407595 SMCR5Q8TEV8 140 aa11.08□□□□□ -0.64
CCDC85A-201ENST00000407595 TRBV6-4A0A1B0GX49 114 aa11.08□□□□□ -0.64
CCDC85A-201ENST00000407595 C11orf72Q8NBR9 251 aa11.08□□□□□ -0.64
CCDC85A-201ENST00000407595 C1orf43Q9BWL3 253 aa11.08□□□□□ -0.64
CCDC85A-201ENST00000407595 C16orf95Q9H693 158 aa11.08□□□□□ -0.64
CCDC85A-201ENST00000407595 RBM3P98179 157 aaKnown RBP11.08□□□□□ -0.64
CCDC85A-201ENST00000407595 C11orf45Q8TAV5 145 aa11.07□□□□□ -0.64
CCDC85A-201ENST00000407595 UPK3BQ9BT76 320 aa11.07□□□□□ -0.64
CCDC85A-201ENST00000407595 REG3AQ06141 175 aa11.06□□□□□ -0.64
CCDC85A-201ENST00000407595 BEAN1Q3B7T3 259 aa11.06□□□□□ -0.64
CCDC85A-201ENST00000407595 SCXQ7RTU7 201 aa11.06□□□□□ -0.64
CCDC85A-201ENST00000407595 FAM19A5Q7Z5A7 132 aaPredicted RBP11.06□□□□□ -0.64
CCDC85A-201ENST00000407595 DEFB131BA0A096LNP1 70 aa11.05□□□□□ -0.64
CCDC85A-201ENST00000407595 SPAG11BQ08648 103 aa11.05□□□□□ -0.64
CCDC85A-201ENST00000407595 CAMK2N2Q96S95 79 aa11.05□□□□□ -0.64
CCDC85A-201ENST00000407595 NANOS2P60321 138 aaKnown RBP11.04□□□□□ -0.64
CCDC85A-201ENST00000407595 CHCHD10Q8WYQ3 142 aaPredicted RBP11.04□□□□□ -0.64
CCDC85A-201ENST00000407595 LINC00959A0A1B0GUT2 108 aa11.04□□□□□ -0.64
CCDC85A-201ENST00000407595 LYRM9A8MSI8 78 aa11.03□□□□□ -0.64
CCDC85A-201ENST00000407595 C9orf116Q5BN46 136 aaPredicted RBP11.03□□□□□ -0.64
CCDC85A-201ENST00000407595 XAGE1AQ9HD64 81 aa11.03□□□□□ -0.64
CCDC85A-201ENST00000407595 FHL2Q14192 279 aa11.02□□□□□ -0.64
CCDC85A-201ENST00000407595 IGLV5-45A0A087WSX0 123 aa11.02□□□□□ -0.65
CCDC85A-201ENST00000407595 SMIM9A6NGZ8 99 aa11.02□□□□□ -0.65
CCDC85A-201ENST00000407595 CSDC2Q9Y534 153 aaKnown RBP11.02□□□□□ -0.65
CCDC85A-201ENST00000407595 Q6JHZ5 121 aa11.01□□□□□ -0.65
CCDC85A-201ENST00000407595 KRTAP1-1Q07627 177 aa11.01□□□□□ -0.65
CCDC85A-201ENST00000407595 A0A0J9YWU9 116 aa11.01□□□□□ -0.65
CCDC85A-201ENST00000407595 MIFP14174 115 aa11.01□□□□□ -0.65
CCDC85A-201ENST00000407595 C5orf47Q569G3 176 aa11.01□□□□□ -0.65
CCDC85A-201ENST00000407595 KPRPQ5T749 579 aaPredicted RBP11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms