RNA–Protein interactions for RNA: ENST00000406134.5

MSH2-202, Transcript of mutS homolog 2, humanhuman

TSL 1 (best) BASIC

Gene MSH2, Length 3,628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-202ENST00000406134 COX6CP09669 75 aa6.81□□□□□ -1.32
MSH2-202ENST00000406134 LINC00482Q8N8I6 264 aa6.81□□□□□ -1.32
MSH2-202ENST00000406134 RPL28P46779 137 aaKnown RBP6.81□□□□□ -1.32
MSH2-202ENST00000406134 KIR2DL5BQ8NHK3 375 aa6.81□□□□□ -1.32
MSH2-202ENST00000406134 UBE2L6O14933 153 aa6.81□□□□□ -1.32
MSH2-202ENST00000406134 Q6Q795 121 aa6.81□□□□□ -1.32
MSH2-202ENST00000406134 TRGV4A0A0C4DH28 118 aa6.8□□□□□ -1.32
MSH2-202ENST00000406134 WIPF1O43516 503 aa6.8□□□□□ -1.32
MSH2-202ENST00000406134 CMC4P56277 68 aaPredicted RBP6.8□□□□□ -1.32
MSH2-202ENST00000406134 LINC00959A0A1B0GUT2 108 aa6.8□□□□□ -1.32
MSH2-202ENST00000406134 CCL18P55774 89 aa6.8□□□□□ -1.32
MSH2-202ENST00000406134 TRACP01848 142 aa6.8□□□□□ -1.32
MSH2-202ENST00000406134 Q8N3U1 123 aa6.8□□□□□ -1.32
MSH2-202ENST00000406134 A0A087WYN8 130 aa6.79□□□□□ -1.32
MSH2-202ENST00000406134 FAM222AQ5U5X8 452 aa6.79□□□□□ -1.32
MSH2-202ENST00000406134 NSD1Q96L73 2696 aaPredicted RBP6.79□□□□□ -1.32
MSH2-202ENST00000406134 SMIM11BQ8TCY0 68 aa6.78□□□□□ -1.32
MSH2-202ENST00000406134 IGKV3OR2-268A0A0C4DH90 116 aa6.78□□□□□ -1.32
MSH2-202ENST00000406134 Q8NDZ9 215 aa6.78□□□□□ -1.32
MSH2-202ENST00000406134 LY6G6DO95868 133 aa6.77□□□□□ -1.32
MSH2-202ENST00000406134 NANOS2P60321 138 aaKnown RBP6.77□□□□□ -1.32
MSH2-202ENST00000406134 C5orf38Q86SI9 138 aa6.77□□□□□ -1.32
MSH2-202ENST00000406134 PKD1L1Q8TDX9 2849 aa6.77□□□□□ -1.33
MSH2-202ENST00000406134 TRBV7-7A0A0K0K1E9 115 aa6.77□□□□□ -1.33
MSH2-202ENST00000406134 Q9HAA7 133 aa6.77□□□□□ -1.33
MSH2-202ENST00000406134 SND1-IT1Q9HBX3 110 aa6.77□□□□□ -1.33
MSH2-202ENST00000406134 SS18Q15532 418 aa6.77□□□□□ -1.33
MSH2-202ENST00000406134 A0A1B0GUV1 79 aa6.76□□□□□ -1.33
MSH2-202ENST00000406134 DEFB130BP0DP73 79 aa6.76□□□□□ -1.33
MSH2-202ENST00000406134 DEFB130AP0DP74 79 aa6.76□□□□□ -1.33
MSH2-202ENST00000406134 KIAA0087Q14695 138 aa6.76□□□□□ -1.33
MSH2-202ENST00000406134 HRCT1Q6UXD1 115 aa6.76□□□□□ -1.33
MSH2-202ENST00000406134 OBSCN-AS1Q96MR7 158 aa6.76□□□□□ -1.33
MSH2-202ENST00000406134 TEP1Q99973 2627 aaKnown RBP6.76□□□□□ -1.33
MSH2-202ENST00000406134 FAM236AA0A1B0GUQ0 79 aa6.76□□□□□ -1.33
MSH2-202ENST00000406134 FAM236BA0A1B0GV22 79 aa6.76□□□□□ -1.33
MSH2-202ENST00000406134 IBA57-AS1B1ANH7 110 aa6.76□□□□□ -1.33
MSH2-202ENST00000406134 GYPEP15421 78 aa6.76□□□□□ -1.33
MSH2-202ENST00000406134 PF4P02776 101 aa6.76□□□□□ -1.33
MSH2-202ENST00000406134 TOMM7Q9P0U1 55 aa6.76□□□□□ -1.33
MSH2-202ENST00000406134 COPS9Q8WXC6 57 aa6.75□□□□□ -1.33
MSH2-202ENST00000406134 C1orf43Q9BWL3 253 aa6.75□□□□□ -1.33
MSH2-202ENST00000406134 TRAV13-2A0A0B4J235 113 aa6.75□□□□□ -1.33
MSH2-202ENST00000406134 LYSTQ99698 3801 aa6.74□□□□□ -1.33
MSH2-202ENST00000406134 BAALC-AS2P0C853 105 aa6.74□□□□□ -1.33
MSH2-202ENST00000406134 A0A096LPF7 62 aa6.74□□□□□ -1.33
MSH2-202ENST00000406134 CLPSL2Q6UWE3 100 aa6.74□□□□□ -1.33
MSH2-202ENST00000406134 C4orf26Q17RF5 130 aa6.73□□□□□ -1.33
MSH2-202ENST00000406134 GAGE2AQ6NT46 116 aa6.73□□□□□ -1.33
MSH2-202ENST00000406134 CRPP02741 224 aa6.73□□□□□ -1.33
MSH2-202ENST00000406134 PFN2P35080 140 aa6.73□□□□□ -1.33
MSH2-202ENST00000406134 XCL1P47992 114 aa6.73□□□□□ -1.33
MSH2-202ENST00000406134 Q8IZM0 81 aa6.73□□□□□ -1.33
MSH2-202ENST00000406134 CELA1Q9UNI1 258 aa6.73□□□□□ -1.33
MSH2-202ENST00000406134 MALP21145 153 aa6.72□□□□□ -1.33
MSH2-202ENST00000406134 LINC00158P58513 81 aa6.72□□□□□ -1.33
MSH2-202ENST00000406134 C11orf68Q9H3H3 251 aaKnown RBP6.72□□□□□ -1.33
MSH2-202ENST00000406134 DEFB4AO15263 64 aa6.72□□□□□ -1.33
MSH2-202ENST00000406134 ATP5G1P05496 136 aa6.71□□□□□ -1.33
MSH2-202ENST00000406134 PRR3P79522 188 aaKnown RBP6.71□□□□□ -1.33
MSH2-202ENST00000406134 C3orf22Q8N5N4 141 aa6.71□□□□□ -1.33
MSH2-202ENST00000406134 PKIGQ9Y2B9 76 aa6.71□□□□□ -1.33
MSH2-202ENST00000406134 LINC00167Q96N53 147 aa6.71□□□□□ -1.34
MSH2-202ENST00000406134 PRO0255Q9UI72 69 aa6.71□□□□□ -1.34
MSH2-202ENST00000406134 LINC01561Q8N1V8 128 aa6.71□□□□□ -1.34
MSH2-202ENST00000406134 Q8NAQ8 132 aa6.71□□□□□ -1.34
MSH2-202ENST00000406134 ATRQ13535 2644 aa6.7□□□□□ -1.34
MSH2-202ENST00000406134 LINC00269Q8N2A0 174 aa6.7□□□□□ -1.34
MSH2-202ENST00000406134 ACYP1P07311 99 aa6.69□□□□□ -1.34
MSH2-202ENST00000406134 MRAPQ8TCY5 172 aa6.69□□□□□ -1.34
MSH2-202ENST00000406134 IGHV4-28A0A0C4DH34 117 aa6.69□□□□□ -1.34
MSH2-202ENST00000406134 UQCRQO14949 82 aa6.69□□□□□ -1.34
MSH2-202ENST00000406134 DEFB135Q30KP9 77 aa6.69□□□□□ -1.34
MSH2-202ENST00000406134 C9orf116Q5BN46 136 aaPredicted RBP6.69□□□□□ -1.34
MSH2-202ENST00000406134 A0A1B0GX51 115 aa6.68□□□□□ -1.34
MSH2-202ENST00000406134 F8WDY8 70 aa6.68□□□□□ -1.34
MSH2-202ENST00000406134 SLPIP03973 132 aa6.68□□□□□ -1.34
MSH2-202ENST00000406134 LYRM9A8MSI8 78 aa6.68□□□□□ -1.34
MSH2-202ENST00000406134 hADV29S1A0JD25 119 aa6.67□□□□□ -1.34
MSH2-202ENST00000406134 LECT2O14960 151 aa6.67□□□□□ -1.34
MSH2-202ENST00000406134 C10orf25Q5T742 122 aa6.67□□□□□ -1.34
MSH2-202ENST00000406134 CD164L2Q6UWJ8 174 aa6.67□□□□□ -1.34
MSH2-202ENST00000406134 DSCR8Q96T75 97 aa6.67□□□□□ -1.34
MSH2-202ENST00000406134 PAX4O43316 350 aa6.67□□□□□ -1.34
MSH2-202ENST00000406134 HIST1H4AP62805 103 aaKnown RBP6.67□□□□□ -1.34
MSH2-202ENST00000406134 C6orf226Q5I0X4 101 aa6.67□□□□□ -1.34
MSH2-202ENST00000406134 CHCHD10Q8WYQ3 142 aaPredicted RBP6.67□□□□□ -1.34
MSH2-202ENST00000406134 CSMD3Q7Z407 3707 aa6.67□□□□□ -1.34
MSH2-202ENST00000406134 SEC61GP60059 68 aa6.67□□□□□ -1.34
MSH2-202ENST00000406134 C14orf132Q9NPU4 83 aa6.67□□□□□ -1.34
MSH2-202ENST00000406134 IGLV10-54A0A075B6I4 117 aa6.66□□□□□ -1.34
MSH2-202ENST00000406134 LINC00643Q86TS7 51 aa6.66□□□□□ -1.34
MSH2-202ENST00000406134 IMUPQ9GZP8 106 aa6.66□□□□□ -1.34
MSH2-202ENST00000406134 J3QKU1 62 aa6.66□□□□□ -1.34
MSH2-202ENST00000406134 C6orf223Q8N319 242 aa6.66□□□□□ -1.34
MSH2-202ENST00000406134 DNAH10Q8IVF4 4471 aa6.66□□□□□ -1.34
MSH2-202ENST00000406134 H0YGX0 51 aa6.65□□□□□ -1.34
MSH2-202ENST00000406134 NCR3O14931 201 aa6.65□□□□□ -1.34
MSH2-202ENST00000406134 LINC00526Q96FQ7 95 aa6.65□□□□□ -1.34
MSH2-202ENST00000406134 HUWE1Q7Z6Z7 4374 aaKnown RBP6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms