RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 TGP01266 2768 aa2.79□□□□□ -1.96
HMGB3P19-201ENST00000403971 TRBV6-8A0A0A6YYG3 113 aa2.79□□□□□ -1.96
HMGB3P19-201ENST00000403971 NUPR2A6NF83 97 aa2.79□□□□□ -1.96
HMGB3P19-201ENST00000403971 HBDP02042 147 aa2.79□□□□□ -1.96
HMGB3P19-201ENST00000403971 HTN3P15516 51 aa2.79□□□□□ -1.96
HMGB3P19-201ENST00000403971 FCER1GP30273 86 aa2.79□□□□□ -1.96
HMGB3P19-201ENST00000403971 NDUFA6P56556 154 aa2.79□□□□□ -1.96
HMGB3P19-201ENST00000403971 PKIAP61925 76 aa2.79□□□□□ -1.96
HMGB3P19-201ENST00000403971 SMAGPQ0VAQ4 97 aa2.79□□□□□ -1.96
HMGB3P19-201ENST00000403971 NEGR1Q7Z3B1 354 aa2.79□□□□□ -1.96
HMGB3P19-201ENST00000403971 HIST3H2BBQ8N257 126 aa2.79□□□□□ -1.96
HMGB3P19-201ENST00000403971 TIMM21Q9BVV7 248 aa2.79□□□□□ -1.96
HMGB3P19-201ENST00000403971 KLK5Q9Y337 293 aaPredicted RBP2.79□□□□□ -1.96
HMGB3P19-201ENST00000403971 CSMD3Q7Z407 3707 aa2.79□□□□□ -1.96
HMGB3P19-201ENST00000403971 TRBV25-1A0A075B6N4 114 aa2.78□□□□□ -1.96
HMGB3P19-201ENST00000403971 IGHV1-24A0A0C4DH33 117 aa2.78□□□□□ -1.96
HMGB3P19-201ENST00000403971 A0A0J9YY99 117 aa2.78□□□□□ -1.96
HMGB3P19-201ENST00000403971 A0A0U1RQV1 116 aa2.78□□□□□ -1.96
HMGB3P19-201ENST00000403971 NUPR1O60356 82 aa2.78□□□□□ -1.96
HMGB3P19-201ENST00000403971 LEPROTL1O95214 131 aa2.78□□□□□ -1.96
HMGB3P19-201ENST00000403971 ZNF25P17030 456 aaPredicted RBP2.78□□□□□ -1.96
HMGB3P19-201ENST00000403971 S100A2P29034 98 aa2.78□□□□□ -1.96
HMGB3P19-201ENST00000403971 PDZD11Q5EBL8 140 aa2.78□□□□□ -1.96
HMGB3P19-201ENST00000403971 LELP1Q5T871 98 aa2.78□□□□□ -1.96
HMGB3P19-201ENST00000403971 LYPD5Q6UWN5 251 aa2.78□□□□□ -1.96
HMGB3P19-201ENST00000403971 MRPL55Q7Z7F7 128 aaKnown RBP2.78□□□□□ -1.96
HMGB3P19-201ENST00000403971 TOMM6Q96B49 74 aa2.78□□□□□ -1.96
HMGB3P19-201ENST00000403971 TMEM243Q9BU79 118 aa2.78□□□□□ -1.96
HMGB3P19-201ENST00000403971 CHCHD7Q9BUK0 85 aa2.78□□□□□ -1.96
HMGB3P19-201ENST00000403971 CYSLTR1Q9Y271 337 aa2.78□□□□□ -1.96
HMGB3P19-201ENST00000403971 VPS13DQ5THJ4 4388 aa2.77□□□□□ -1.97
HMGB3P19-201ENST00000403971 IGIPA6NJ69 53 aa2.77□□□□□ -1.97
HMGB3P19-201ENST00000403971 IGLL5B9A064 214 aa2.77□□□□□ -1.97
HMGB3P19-201ENST00000403971 CCL18P55774 89 aa2.77□□□□□ -1.97
HMGB3P19-201ENST00000403971 PRR3P79522 188 aaKnown RBP2.77□□□□□ -1.97
HMGB3P19-201ENST00000403971 MRPS36P82909 103 aaKnown RBP2.77□□□□□ -1.97
HMGB3P19-201ENST00000403971 KRTAP5-4Q6L8H1 288 aa2.77□□□□□ -1.97
HMGB3P19-201ENST00000403971 MRPL52Q86TS9 123 aaKnown RBP2.77□□□□□ -1.97
HMGB3P19-201ENST00000403971 FAM19A2Q8N3H0 131 aa2.77□□□□□ -1.97
HMGB3P19-201ENST00000403971 MUC7Q8TAX7 377 aa2.77□□□□□ -1.97
HMGB3P19-201ENST00000403971 TMEM141Q96I45 108 aa2.77□□□□□ -1.97
HMGB3P19-201ENST00000403971 CAMK2N2Q96S95 79 aa2.77□□□□□ -1.97
HMGB3P19-201ENST00000403971 HIST1H2BLQ99880 126 aa2.77□□□□□ -1.97
HMGB3P19-201ENST00000403971 UPK3BQ9BT76 320 aa2.77□□□□□ -1.97
HMGB3P19-201ENST00000403971 SPANXA1Q9NS26 97 aa2.77□□□□□ -1.97
HMGB3P19-201ENST00000403971 HSPB8Q9UJY1 196 aa2.77□□□□□ -1.97
HMGB3P19-201ENST00000403971 APLNQ9ULZ1 77 aa2.77□□□□□ -1.97
HMGB3P19-201ENST00000403971 TRAV8-6A0A0B4J262 113 aa2.76□□□□□ -1.97
HMGB3P19-201ENST00000403971 SPRR5A0A1B0GTR4 108 aa2.76□□□□□ -1.97
HMGB3P19-201ENST00000403971 C3orf84H3BNL1 204 aa2.76□□□□□ -1.97
HMGB3P19-201ENST00000403971 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.76□□□□□ -1.97
HMGB3P19-201ENST00000403971 K7EP13 123 aa2.76□□□□□ -1.97
HMGB3P19-201ENST00000403971 UBE2L6O14933 153 aa2.76□□□□□ -1.97
HMGB3P19-201ENST00000403971 FGF6P10767 208 aa2.76□□□□□ -1.97
HMGB3P19-201ENST00000403971 AKR1D1P51857 326 aa2.76□□□□□ -1.97
HMGB3P19-201ENST00000403971 RPL39P62891 51 aaKnown RBP2.76□□□□□ -1.97
HMGB3P19-201ENST00000403971 ESRGQ1W209 222 aa2.76□□□□□ -1.97
HMGB3P19-201ENST00000403971 SPATA12Q7Z6I5 190 aa2.76□□□□□ -1.97
HMGB3P19-201ENST00000403971 CIRBP-AS1Q8TBR5 109 aa2.76□□□□□ -1.97
HMGB3P19-201ENST00000403971 SCGB3A1Q96QR1 104 aa2.76□□□□□ -1.97
HMGB3P19-201ENST00000403971 MAP1LC3CQ9BXW4 147 aa2.76□□□□□ -1.97
HMGB3P19-201ENST00000403971 UBE2D4Q9Y2X8 147 aa2.76□□□□□ -1.97
HMGB3P19-201ENST00000403971 MRPS16Q9Y3D3 137 aaKnown RBP2.76□□□□□ -1.97
HMGB3P19-201ENST00000403971 TENM2Q9NT68 2774 aa2.76□□□□□ -1.97
HMGB3P19-201ENST00000403971 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.75□□□□□ -1.97
HMGB3P19-201ENST00000403971 A0A087WX48 190 aa2.75□□□□□ -1.97
HMGB3P19-201ENST00000403971 TRAV12-1A0A0B4J245 112 aa2.75□□□□□ -1.97
HMGB3P19-201ENST00000403971 IGKV2-29A2NJV5 120 aaPredicted RBP2.75□□□□□ -1.97
HMGB3P19-201ENST00000403971 SYS1-DBNDD2H3BUS1 97 aa2.75□□□□□ -1.97
HMGB3P19-201ENST00000403971 CCL25O15444 150 aa2.75□□□□□ -1.97
HMGB3P19-201ENST00000403971 FABP4P15090 132 aa2.75□□□□□ -1.97
HMGB3P19-201ENST00000403971 RBX1P62877 108 aa2.75□□□□□ -1.97
HMGB3P19-201ENST00000403971 PMVKQ15126 192 aa2.75□□□□□ -1.97
HMGB3P19-201ENST00000403971 PMCHL1Q16048 86 aa2.75□□□□□ -1.97
HMGB3P19-201ENST00000403971 LINC01556Q5JQF7 62 aa2.75□□□□□ -1.97
HMGB3P19-201ENST00000403971 AMMECR1LQ6DCA0 310 aa2.75□□□□□ -1.97
HMGB3P19-201ENST00000403971 OR5A1Q8NGJ0 315 aa2.75□□□□□ -1.97
HMGB3P19-201ENST00000403971 IFI27L1Q96BM0 104 aa2.75□□□□□ -1.97
HMGB3P19-201ENST00000403971 AMELXQ99217 191 aa2.75□□□□□ -1.97
HMGB3P19-201ENST00000403971 CDC42SE2Q9NRR3 84 aa2.75□□□□□ -1.97
HMGB3P19-201ENST00000403971 LINC00588Q9Y4M8 146 aa2.75□□□□□ -1.97
HMGB3P19-201ENST00000403971 TMEM262E9PQX1 116 aa2.74□□□□□ -1.97
HMGB3P19-201ENST00000403971 SIVA1O15304 175 aa2.74□□□□□ -1.97
HMGB3P19-201ENST00000403971 C3orf79P0CE67 100 aa2.74□□□□□ -1.97
HMGB3P19-201ENST00000403971 SEC11AP67812 179 aa2.74□□□□□ -1.97
HMGB3P19-201ENST00000403971 MPV17L2Q567V2 206 aa2.74□□□□□ -1.97
HMGB3P19-201ENST00000403971 LINC01545Q5VT33 79 aa2.74□□□□□ -1.97
HMGB3P19-201ENST00000403971 LGALS9CQ6DKI2 356 aa2.74□□□□□ -1.97
HMGB3P19-201ENST00000403971 FAM19A3Q7Z5A8 133 aa2.74□□□□□ -1.97
HMGB3P19-201ENST00000403971 ZNF664Q8N3J9 261 aa2.74□□□□□ -1.97
HMGB3P19-201ENST00000403971 C10orf126Q8N4M7 172 aa2.74□□□□□ -1.97
HMGB3P19-201ENST00000403971 OR10D4PQ8NGN7 298 aa2.74□□□□□ -1.97
HMGB3P19-201ENST00000403971 DEFB104AQ8WTQ1 72 aa2.74□□□□□ -1.97
HMGB3P19-201ENST00000403971 BAALCQ8WXS3 180 aa2.74□□□□□ -1.97
HMGB3P19-201ENST00000403971 C2orf88Q9BSF0 95 aa2.74□□□□□ -1.97
HMGB3P19-201ENST00000403971 SACSQ9NZJ4 4579 aa2.74□□□□□ -1.97
HMGB3P19-201ENST00000403971 DNAH1Q9P2D7 4330 aa2.73□□□□□ -1.97
HMGB3P19-201ENST00000403971 TRAV8-4A0A0B4J246 113 aa2.73□□□□□ -1.97
HMGB3P19-201ENST00000403971 LOC105371267A0A1B0GV96 52 aa2.73□□□□□ -1.97
HMGB3P19-201ENST00000403971 C20orf202A1L168 122 aa2.73□□□□□ -1.97
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