RNA–Protein interactions for RNA: ENST00000401605.5

CLIP4-202, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2 BASIC

Gene CLIP4, Length 2,322 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-202ENST00000401605 RMI2Q96E14 147 aa4.35□□□□□ -1.71
CLIP4-202ENST00000401605 ZNF580Q9UK33 172 aa4.35□□□□□ -1.71
CLIP4-202ENST00000401605 ZNF706Q9Y5V0 76 aaPredicted RBP4.35□□□□□ -1.71
CLIP4-202ENST00000401605 IGLV5-52A0A0A0MRZ9 124 aa4.35□□□□□ -1.71
CLIP4-202ENST00000401605 A0A0J9YXV3 536 aa4.35□□□□□ -1.71
CLIP4-202ENST00000401605 SH2D1AO60880 128 aa4.35□□□□□ -1.71
CLIP4-202ENST00000401605 FAM53AQ6NSI3 398 aaPredicted RBP4.35□□□□□ -1.71
CLIP4-202ENST00000401605 TMEM141Q96I45 108 aa4.35□□□□□ -1.71
CLIP4-202ENST00000401605 TRAV23DV6A0A075B6W5 121 aa4.34□□□□□ -1.71
CLIP4-202ENST00000401605 IGKV1-16P04430 117 aa4.34□□□□□ -1.71
CLIP4-202ENST00000401605 FXYD7P58549 80 aa4.34□□□□□ -1.72
CLIP4-202ENST00000401605 C9orf66Q5T8R8 295 aa4.34□□□□□ -1.72
CLIP4-202ENST00000401605 SUMO4Q6EEV6 95 aa4.34□□□□□ -1.72
CLIP4-202ENST00000401605 C4orf3Q8WVX3 66 aa4.34□□□□□ -1.72
CLIP4-202ENST00000401605 B9D2Q9BPU9 175 aa4.34□□□□□ -1.72
CLIP4-202ENST00000401605 CCL28Q9NRJ3 127 aa4.34□□□□□ -1.72
CLIP4-202ENST00000401605 PLXNB1O43157 2135 aa4.33□□□□□ -1.72
CLIP4-202ENST00000401605 ERC2-IT1O76042 136 aa4.33□□□□□ -1.72
CLIP4-202ENST00000401605 DEFB136Q30KP8 78 aa4.33□□□□□ -1.72
CLIP4-202ENST00000401605 Q6ZRP5 223 aa4.33□□□□□ -1.72
CLIP4-202ENST00000401605 SPTSSBQ8NFR3 76 aa4.33□□□□□ -1.72
CLIP4-202ENST00000401605 IGHV6-1A0A0B4J1U7 121 aa4.33□□□□□ -1.72
CLIP4-202ENST00000401605 TSHBP01222 138 aa4.33□□□□□ -1.72
CLIP4-202ENST00000401605 RPL28P46779 137 aaKnown RBP4.33□□□□□ -1.72
CLIP4-202ENST00000401605 SPANXN1Q5VSR9 72 aa4.33□□□□□ -1.72
CLIP4-202ENST00000401605 ZNF833PQ6ZTB9 187 aa4.33□□□□□ -1.72
CLIP4-202ENST00000401605 NPBQ8NG41 125 aa4.33□□□□□ -1.72
CLIP4-202ENST00000401605 NDUFA12Q9UI09 145 aa4.33□□□□□ -1.72
CLIP4-202ENST00000401605 SNURFQ9Y675 71 aa4.33□□□□□ -1.72
CLIP4-202ENST00000401605 IGLV5-45A0A087WSX0 123 aa4.32□□□□□ -1.72
CLIP4-202ENST00000401605 IGHV7-81A0A0B4J1V7 117 aa4.32□□□□□ -1.72
CLIP4-202ENST00000401605 TRAV22A0A0B4J277 110 aa4.32□□□□□ -1.72
CLIP4-202ENST00000401605 IGKV1-39P01597 117 aa4.32□□□□□ -1.72
CLIP4-202ENST00000401605 IGKV1D-39P04432 117 aa4.32□□□□□ -1.72
CLIP4-202ENST00000401605 ARMS2P0C7Q2 107 aa4.32□□□□□ -1.72
CLIP4-202ENST00000401605 SAA2P0DJI9 122 aaPredicted RBP4.32□□□□□ -1.72
CLIP4-202ENST00000401605 MIR17HGQ75NE6 70 aa4.32□□□□□ -1.72
CLIP4-202ENST00000401605 G3V318 75 aa4.32□□□□□ -1.72
CLIP4-202ENST00000401605 SAA1P0DJI8 122 aaPredicted RBP4.32□□□□□ -1.72
CLIP4-202ENST00000401605 PATE2Q6UY27 113 aa4.32□□□□□ -1.72
CLIP4-202ENST00000401605 TRBV6-6A0A0A6YYG2 114 aa4.31□□□□□ -1.72
CLIP4-202ENST00000401605 hDV103S1A0JD37 113 aa4.31□□□□□ -1.72
CLIP4-202ENST00000401605 C16orf90A8MZG2 172 aa4.31□□□□□ -1.72
CLIP4-202ENST00000401605 M0R3E3 92 aa4.31□□□□□ -1.72
CLIP4-202ENST00000401605 SCXQ7RTU7 201 aa4.31□□□□□ -1.72
CLIP4-202ENST00000401605 RNF5Q99942 180 aa4.31□□□□□ -1.72
CLIP4-202ENST00000401605 CYP4F30PQ9H0H9 118 aa4.31□□□□□ -1.72
CLIP4-202ENST00000401605 DSCAML1Q8TD84 2053 aa4.31□□□□□ -1.72
CLIP4-202ENST00000401605 SDHAF1A6NFY7 115 aa4.3□□□□□ -1.72
CLIP4-202ENST00000401605 GNRH2O43555 120 aa4.3□□□□□ -1.72
CLIP4-202ENST00000401605 NDPQ00604 133 aa4.3□□□□□ -1.72
CLIP4-202ENST00000401605 EIF4EBP1Q13541 118 aaPredicted RBP4.3□□□□□ -1.72
CLIP4-202ENST00000401605 RPL39P5Q59GN2 51 aa4.3□□□□□ -1.72
CLIP4-202ENST00000401605 SMAD5-AS1Q9Y6J3 95 aa4.3□□□□□ -1.72
CLIP4-202ENST00000401605 HCG22E2RYF7 251 aa4.3□□□□□ -1.72
CLIP4-202ENST00000401605 FAM167A-AS1Q96KT0 104 aa4.3□□□□□ -1.72
CLIP4-202ENST00000401605 C11orf86A6NJI1 115 aa4.29□□□□□ -1.72
CLIP4-202ENST00000401605 C15orf32Q32M92 178 aa4.29□□□□□ -1.72
CLIP4-202ENST00000401605 LINC00846Q9NV44 126 aa4.29□□□□□ -1.72
CLIP4-202ENST00000401605 DNAH9Q9NYC9 4486 aa4.29□□□□□ -1.72
CLIP4-202ENST00000401605 I3L3M4 83 aa4.29□□□□□ -1.72
CLIP4-202ENST00000401605 BAALC-AS2P0C853 105 aa4.29□□□□□ -1.72
CLIP4-202ENST00000401605 ADAMTSL4-AS1Q5T5F5 129 aa4.29□□□□□ -1.72
CLIP4-202ENST00000401605 NOTCH2NLQ7Z3S9 236 aa4.29□□□□□ -1.72
CLIP4-202ENST00000401605 MUSTN1Q8IVN3 82 aa4.29□□□□□ -1.72
CLIP4-202ENST00000401605 KMT2CQ8NEZ4 4911 aaKnown RBP4.29□□□□□ -1.72
CLIP4-202ENST00000401605 TRBV7-4A0A0J9YYF1 115 aa4.28□□□□□ -1.72
CLIP4-202ENST00000401605 PROP1O75360 226 aa4.28□□□□□ -1.72
CLIP4-202ENST00000401605 P0C879 139 aa4.28□□□□□ -1.72
CLIP4-202ENST00000401605 LINC00322Q6ZN03 302 aaPredicted RBP4.28□□□□□ -1.72
CLIP4-202ENST00000401605 IGHV4OR15-8A0A075B7B6 117 aa4.28□□□□□ -1.72
CLIP4-202ENST00000401605 A0A087WW49 117 aa4.28□□□□□ -1.72
CLIP4-202ENST00000401605 IGKV1-6A0A0C4DH72 117 aa4.28□□□□□ -1.72
CLIP4-202ENST00000401605 A0A0J9YX75 114 aa4.28□□□□□ -1.72
CLIP4-202ENST00000401605 TRBV6-1A0A0K0K1D8 114 aa4.28□□□□□ -1.72
CLIP4-202ENST00000401605 H3BUA1 57 aa4.28□□□□□ -1.72
CLIP4-202ENST00000401605 Q6ZTC4 211 aa4.28□□□□□ -1.72
CLIP4-202ENST00000401605 C8orf49Q96NF6 230 aa4.28□□□□□ -1.72
CLIP4-202ENST00000401605 IGHV3-11P01762 117 aa4.27□□□□□ -1.73
CLIP4-202ENST00000401605 TRGV3P03979 118 aa4.27□□□□□ -1.73
CLIP4-202ENST00000401605 PRB4P10163 310 aaPredicted RBP4.27□□□□□ -1.73
CLIP4-202ENST00000401605 ASB16-AS1Q495Z4 193 aa4.27□□□□□ -1.73
CLIP4-202ENST00000401605 LINC00242Q5T6M2 205 aa4.27□□□□□ -1.73
CLIP4-202ENST00000401605 TMEM254Q8TBM7 123 aa4.27□□□□□ -1.73
CLIP4-202ENST00000401605 TMEM14BQ9NUH8 114 aa4.27□□□□□ -1.73
CLIP4-202ENST00000401605 IGLV5-37A0A075B6J1 123 aa4.27□□□□□ -1.73
CLIP4-202ENST00000401605 C3orf84H3BNL1 204 aa4.27□□□□□ -1.73
CLIP4-202ENST00000401605 CHKB-CPT1BH3BT56 60 aa4.27□□□□□ -1.73
CLIP4-202ENST00000401605 Q5VV11 94 aa4.27□□□□□ -1.73
CLIP4-202ENST00000401605 SCGB3A1Q96QR1 104 aa4.27□□□□□ -1.73
CLIP4-202ENST00000401605 LIMD2Q9BT23 127 aa4.27□□□□□ -1.73
CLIP4-202ENST00000401605 SOCS3O14543 225 aa4.26□□□□□ -1.73
CLIP4-202ENST00000401605 C10orf25Q5T742 122 aa4.26□□□□□ -1.73
CLIP4-202ENST00000401605 CDC42SE1Q9NRR8 79 aa4.26□□□□□ -1.73
CLIP4-202ENST00000401605 TENM3Q9P273 2699 aa4.26□□□□□ -1.73
CLIP4-202ENST00000401605 IGLV2-23P01705 113 aa4.26□□□□□ -1.73
CLIP4-202ENST00000401605 Q86TA4 180 aa4.26□□□□□ -1.73
CLIP4-202ENST00000401605 C14orf178Q8N769 122 aaPredicted RBP4.26□□□□□ -1.73
CLIP4-202ENST00000401605 CHCHD10Q8WYQ3 142 aaPredicted RBP4.26□□□□□ -1.73
CLIP4-202ENST00000401605 USMG5Q96IX5 58 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms