RNA–Protein interactions for RNA: ENST00000401468.7

VPS53-203, Transcript of VPS53, GARP complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS53, Length 1,269 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS53-203ENST00000401468 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.99□□□□□ -1.45
VPS53-203ENST00000401468 A0A0J9YXV3 536 aa5.99□□□□□ -1.45
VPS53-203ENST00000401468 EPM2AB3EWF7 344 aa5.99□□□□□ -1.45
VPS53-203ENST00000401468 USP17L23D6RBM5 183 aa5.99□□□□□ -1.45
VPS53-203ENST00000401468 F8VRH5 84 aa5.99□□□□□ -1.45
VPS53-203ENST00000401468 COX7A2LO14548 114 aa5.99□□□□□ -1.45
VPS53-203ENST00000401468 FABP4P15090 132 aa5.99□□□□□ -1.45
VPS53-203ENST00000401468 Q5VSD8 79 aa5.99□□□□□ -1.45
VPS53-203ENST00000401468 Q8N814 137 aa5.99□□□□□ -1.45
VPS53-203ENST00000401468 HIST1H2BLQ99880 126 aa5.99□□□□□ -1.45
VPS53-203ENST00000401468 IGHV3-64A0A075B6Q5 118 aa5.98□□□□□ -1.45
VPS53-203ENST00000401468 IGLV5-52A0A0A0MRZ9 124 aa5.98□□□□□ -1.45
VPS53-203ENST00000401468 IGHV1-58A0A0C4DH39 117 aa5.98□□□□□ -1.45
VPS53-203ENST00000401468 LOC105371267A0A1B0GV96 52 aa5.98□□□□□ -1.45
VPS53-203ENST00000401468 SYS1-DBNDD2H3BUS1 97 aa5.98□□□□□ -1.45
VPS53-203ENST00000401468 S100A6P06703 90 aa5.98□□□□□ -1.45
VPS53-203ENST00000401468 PRSS1P07477 247 aa5.98□□□□□ -1.45
VPS53-203ENST00000401468 GCSHP23434 173 aa5.98□□□□□ -1.45
VPS53-203ENST00000401468 SNRPEP62304 92 aaKnown RBP5.98□□□□□ -1.45
VPS53-203ENST00000401468 S100A12P80511 92 aa5.98□□□□□ -1.45
VPS53-203ENST00000401468 C14orf177Q52M58 125 aa5.98□□□□□ -1.45
VPS53-203ENST00000401468 MAP1LC3CQ9BXW4 147 aa5.98□□□□□ -1.45
VPS53-203ENST00000401468 FAM30AQ9NZY2 134 aa5.98□□□□□ -1.45
VPS53-203ENST00000401468 CDKN2A-AS1Q9UH64 79 aa5.98□□□□□ -1.45
VPS53-203ENST00000401468 VPS13BQ7Z7G8 4022 aa5.98□□□□□ -1.45
VPS53-203ENST00000401468 C11orf86A6NJI1 115 aa5.97□□□□□ -1.45
VPS53-203ENST00000401468 C3orf79P0CE67 100 aa5.97□□□□□ -1.45
VPS53-203ENST00000401468 ZNF22P17026 224 aaPredicted RBP5.97□□□□□ -1.45
VPS53-203ENST00000401468 CNBPP62633 177 aaKnown RBP5.97□□□□□ -1.45
VPS53-203ENST00000401468 LINC01545Q5VT33 79 aa5.97□□□□□ -1.45
VPS53-203ENST00000401468 CFAP161Q6P656 301 aa5.97□□□□□ -1.45
VPS53-203ENST00000401468 PET117Q6UWS5 81 aa5.97□□□□□ -1.45
VPS53-203ENST00000401468 C5orf38Q86SI9 138 aa5.97□□□□□ -1.45
VPS53-203ENST00000401468 OR10D4PQ8NGN7 298 aa5.97□□□□□ -1.45
VPS53-203ENST00000401468 NTN5Q8WTR8 489 aaPredicted RBP5.97□□□□□ -1.45
VPS53-203ENST00000401468 CHAC1Q9BUX1 264 aa5.97□□□□□ -1.45
VPS53-203ENST00000401468 MRPL35Q9NZE8 188 aaKnown RBP5.97□□□□□ -1.45
VPS53-203ENST00000401468 CHTOPQ9Y3Y2 248 aaKnown RBP5.97□□□□□ -1.45
VPS53-203ENST00000401468 IGLV5-39A0A0G2JS06 123 aa5.96□□□□□ -1.46
VPS53-203ENST00000401468 SMIM1B2RUZ4 78 aa5.96□□□□□ -1.46
VPS53-203ENST00000401468 APOMO95445 188 aa5.96□□□□□ -1.46
VPS53-203ENST00000401468 KIAA0087Q14695 138 aa5.96□□□□□ -1.46
VPS53-203ENST00000401468 GEMIN7Q9H840 131 aaKnown RBP5.96□□□□□ -1.46
VPS53-203ENST00000401468 F8WDY8 70 aa5.95□□□□□ -1.46
VPS53-203ENST00000401468 INAFM2P0DMQ5 153 aa5.95□□□□□ -1.46
VPS53-203ENST00000401468 PLNP26678 52 aa5.95□□□□□ -1.46
VPS53-203ENST00000401468 CTAG1AP78358 180 aa5.95□□□□□ -1.46
VPS53-203ENST00000401468 LINC00469Q8N7U9 141 aa5.95□□□□□ -1.46
VPS53-203ENST00000401468 C2orf48Q96LS8 159 aa5.95□□□□□ -1.46
VPS53-203ENST00000401468 MYCBP2O75592 4640 aa5.95□□□□□ -1.46
VPS53-203ENST00000401468 FAT1Q14517 4588 aa5.94□□□□□ -1.46
VPS53-203ENST00000401468 DPM2O94777 84 aa5.94□□□□□ -1.46
VPS53-203ENST00000401468 MALP21145 153 aa5.94□□□□□ -1.46
VPS53-203ENST00000401468 S100A2P29034 98 aa5.94□□□□□ -1.46
VPS53-203ENST00000401468 Q8IZM0 81 aa5.94□□□□□ -1.46
VPS53-203ENST00000401468 hDV102S1A0JD36 115 aa5.93□□□□□ -1.46
VPS53-203ENST00000401468 TMEM223A0PJW6 202 aa5.93□□□□□ -1.46
VPS53-203ENST00000401468 H3BRM9 83 aa5.93□□□□□ -1.46
VPS53-203ENST00000401468 IGKCP01834 107 aa5.93□□□□□ -1.46
VPS53-203ENST00000401468 ORAOV1Q8WV07 137 aa5.93□□□□□ -1.46
VPS53-203ENST00000401468 HMCN2Q8NDA2 5059 aa5.92□□□□□ -1.46
VPS53-203ENST00000401468 ZNF561-AS1K7EIQ3 104 aa5.92□□□□□ -1.46
VPS53-203ENST00000401468 AKR1D1P51857 326 aa5.92□□□□□ -1.46
VPS53-203ENST00000401468 KRTDAPP60985 99 aa5.92□□□□□ -1.46
VPS53-203ENST00000401468 SPAG11BQ08648 103 aa5.92□□□□□ -1.46
VPS53-203ENST00000401468 HIGD2BQ4VC39 106 aa5.92□□□□□ -1.46
VPS53-203ENST00000401468 C9orf163Q8N9P6 203 aa5.92□□□□□ -1.46
VPS53-203ENST00000401468 H0Y8G0 127 aa5.91□□□□□ -1.46
VPS53-203ENST00000401468 SPINK8P0C7L1 97 aa5.91□□□□□ -1.46
VPS53-203ENST00000401468 TMEM170BQ5T4T1 132 aa5.91□□□□□ -1.46
VPS53-203ENST00000401468 DNAH8Q96JB1 4490 aa5.9□□□□□ -1.46
VPS53-203ENST00000401468 CXCL5P42830 114 aa5.9□□□□□ -1.46
VPS53-203ENST00000401468 SYCNQ0VAF6 134 aa5.9□□□□□ -1.46
VPS53-203ENST00000401468 COX7B2Q8TF08 81 aa5.9□□□□□ -1.46
VPS53-203ENST00000401468 PMCHL2Q9BQD1 86 aa5.9□□□□□ -1.46
VPS53-203ENST00000401468 TMA7Q9Y2S6 64 aaKnown RBP5.9□□□□□ -1.46
VPS53-203ENST00000401468 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.89□□□□□ -1.47
VPS53-203ENST00000401468 TRBV30A0A0K0K1B3 111 aa5.89□□□□□ -1.47
VPS53-203ENST00000401468 C20orf202A1L168 122 aa5.89□□□□□ -1.47
VPS53-203ENST00000401468 E9PLD3 99 aa5.89□□□□□ -1.47
VPS53-203ENST00000401468 Q6ZSA8 131 aa5.89□□□□□ -1.47
VPS53-203ENST00000401468 LINC00526Q96FQ7 95 aa5.89□□□□□ -1.47
VPS53-203ENST00000401468 ZNF625Q96I27 306 aaPredicted RBP5.89□□□□□ -1.47
VPS53-203ENST00000401468 CARD19Q96LW7 228 aa5.89□□□□□ -1.47
VPS53-203ENST00000401468 NDUFA1O15239 70 aa5.88□□□□□ -1.47
VPS53-203ENST00000401468 LEPROTO15243 131 aa5.88□□□□□ -1.47
VPS53-203ENST00000401468 TLX1NBP0CAT3 122 aa5.88□□□□□ -1.47
VPS53-203ENST00000401468 CIRBPQ14011 172 aaKnown RBP5.88□□□□□ -1.47
VPS53-203ENST00000401468 C6orf226Q5I0X4 101 aa5.88□□□□□ -1.47
VPS53-203ENST00000401468 C10orf25Q5T742 122 aa5.88□□□□□ -1.47
VPS53-203ENST00000401468 SFTA2Q6UW10 78 aa5.88□□□□□ -1.47
VPS53-203ENST00000401468 SDIM1Q6ZPB5 146 aa5.88□□□□□ -1.47
VPS53-203ENST00000401468 Q6ZRU5 148 aa5.88□□□□□ -1.47
VPS53-203ENST00000401468 CAMK2N2Q96S95 79 aa5.88□□□□□ -1.47
VPS53-203ENST00000401468 PRSS2P07478 247 aa5.87□□□□□ -1.47
VPS53-203ENST00000401468 TSPEAR-AS2P59090 65 aa5.87□□□□□ -1.47
VPS53-203ENST00000401468 C2orf82Q6UX34 121 aa5.87□□□□□ -1.47
VPS53-203ENST00000401468 UNQ6190/PRO20217Q6UXQ8 127 aa5.87□□□□□ -1.47
VPS53-203ENST00000401468 SCXQ7RTU7 201 aa5.87□□□□□ -1.47
VPS53-203ENST00000401468 PLEKHB2Q96CS7 222 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms