RNA–Protein interactions for RNA: ENST00000400540.5

LINC00544-201, long intergenic non-protein coding RNA 544, humanhuman

TSL 5 BASIC

Gene LINC00544, Length 1,031 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00544-201ENST00000400540 RETNLBQ9BQ08 111 aa6.98□□□□□ -1.29
LINC00544-201ENST00000400540 BCE1O60756 84 aa6.97□□□□□ -1.29
LINC00544-201ENST00000400540 KRTAP13-2Q52LG2 175 aa6.97□□□□□ -1.29
LINC00544-201ENST00000400540 LBHQ53QV2 105 aaPredicted RBP6.97□□□□□ -1.29
LINC00544-201ENST00000400540 ALKBH7Q9BT30 221 aaPredicted RBP6.97□□□□□ -1.29
LINC00544-201ENST00000400540 RPL37AP8A6NKH3 93 aa6.96□□□□□ -1.3
LINC00544-201ENST00000400540 PRSS47A8MTI9 375 aa6.96□□□□□ -1.3
LINC00544-201ENST00000400540 CRYGAP11844 174 aa6.96□□□□□ -1.3
LINC00544-201ENST00000400540 RPL28P46779 137 aaKnown RBP6.96□□□□□ -1.3
LINC00544-201ENST00000400540 VCX2Q9H322 139 aa6.96□□□□□ -1.3
LINC00544-201ENST00000400540 MAP1LC3AQ9H492 121 aa6.96□□□□□ -1.3
LINC00544-201ENST00000400540 TP73-AS1Q9UF72 201 aa6.96□□□□□ -1.3
LINC00544-201ENST00000400540 CDKN2A-AS1Q9UH64 79 aa6.96□□□□□ -1.3
LINC00544-201ENST00000400540 CYSLTR1Q9Y271 337 aa6.96□□□□□ -1.3
LINC00544-201ENST00000400540 F8VRH5 84 aa6.95□□□□□ -1.3
LINC00544-201ENST00000400540 ATP5L2Q7Z4Y8 100 aa6.95□□□□□ -1.3
LINC00544-201ENST00000400540 FAM19A3Q7Z5A8 133 aa6.95□□□□□ -1.3
LINC00544-201ENST00000400540 Q8N8P6 123 aa6.95□□□□□ -1.3
LINC00544-201ENST00000400540 LINC00167Q96N53 147 aa6.95□□□□□ -1.3
LINC00544-201ENST00000400540 KRTAP9-6A0A140TA67 174 aa6.94□□□□□ -1.3
LINC00544-201ENST00000400540 GAGE10A6NGK3 116 aa6.94□□□□□ -1.3
LINC00544-201ENST00000400540 IGIPA6NJ69 53 aa6.94□□□□□ -1.3
LINC00544-201ENST00000400540 PEA15Q15121 130 aa6.94□□□□□ -1.3
LINC00544-201ENST00000400540 KRTAP13-1Q8IUC0 172 aa6.93□□□□□ -1.3
LINC00544-201ENST00000400540 LAMTOR2Q9Y2Q5 125 aa6.93□□□□□ -1.3
LINC00544-201ENST00000400540 HERVK_113P63121 156 aa6.92□□□□□ -1.3
LINC00544-201ENST00000400540 ORMDL2Q53FV1 153 aa6.92□□□□□ -1.3
LINC00544-201ENST00000400540 SMIM1B2RUZ4 78 aa6.91□□□□□ -1.3
LINC00544-201ENST00000400540 SCO1O75880 301 aa6.91□□□□□ -1.3
LINC00544-201ENST00000400540 GEMIN7Q9H840 131 aaKnown RBP6.91□□□□□ -1.3
LINC00544-201ENST00000400540 NPSP0C0P6 89 aa6.9□□□□□ -1.3
LINC00544-201ENST00000400540 UBE2AP49459 152 aa6.9□□□□□ -1.3
LINC00544-201ENST00000400540 LINC00304Q8N9R0 145 aa6.9□□□□□ -1.3
LINC00544-201ENST00000400540 CXCL5P42830 114 aa6.89□□□□□ -1.31
LINC00544-201ENST00000400540 SEC11AP67812 179 aa6.89□□□□□ -1.31
LINC00544-201ENST00000400540 PNRC1Q12796 327 aaPredicted RBP6.89□□□□□ -1.31
LINC00544-201ENST00000400540 COX7B2Q8TF08 81 aa6.89□□□□□ -1.31
LINC00544-201ENST00000400540 CDIP1Q9H305 208 aa6.89□□□□□ -1.31
LINC00544-201ENST00000400540 IGLV5-37A0A075B6J1 123 aa6.88□□□□□ -1.31
LINC00544-201ENST00000400540 IGKV2-28A0A075B6P5 120 aa6.88□□□□□ -1.31
LINC00544-201ENST00000400540 IGKV2D-28P01615 120 aa6.88□□□□□ -1.31
LINC00544-201ENST00000400540 RAB5BP61020 215 aa6.88□□□□□ -1.31
LINC00544-201ENST00000400540 TPRXLQ17RH7 258 aa6.88□□□□□ -1.31
LINC00544-201ENST00000400540 FAM229BQ4G0N7 80 aa6.88□□□□□ -1.31
LINC00544-201ENST00000400540 TIMM17AQ99595 171 aa6.88□□□□□ -1.31
LINC00544-201ENST00000400540 K7EMI3 77 aa6.87□□□□□ -1.31
LINC00544-201ENST00000400540 ADCYAP1P18509 176 aa6.87□□□□□ -1.31
LINC00544-201ENST00000400540 PRLHP81277 87 aa6.87□□□□□ -1.31
LINC00544-201ENST00000400540 NKAPP1Q8N9T2 125 aa6.87□□□□□ -1.31
LINC00544-201ENST00000400540 TOMM6Q96B49 74 aa6.87□□□□□ -1.31
LINC00544-201ENST00000400540 NXT2Q9NPJ8 142 aaKnown RBP6.87□□□□□ -1.31
LINC00544-201ENST00000400540 IGLV7-46A0A075B6I9 117 aa6.86□□□□□ -1.31
LINC00544-201ENST00000400540 SPINK8P0C7L1 97 aa6.86□□□□□ -1.31
LINC00544-201ENST00000400540 PDZD11Q5EBL8 140 aa6.86□□□□□ -1.31
LINC00544-201ENST00000400540 PAPPA-AS1Q5QFB9 102 aa6.86□□□□□ -1.31
LINC00544-201ENST00000400540 IGLV5-45A0A087WSX0 123 aa6.85□□□□□ -1.31
LINC00544-201ENST00000400540 IGKV2D-26A0A0A0MRZ7 120 aa6.85□□□□□ -1.31
LINC00544-201ENST00000400540 A0A1B0GVG6 124 aa6.85□□□□□ -1.31
LINC00544-201ENST00000400540 TINCRA0A1B0GVN0 87 aa6.85□□□□□ -1.31
LINC00544-201ENST00000400540 TMEM238C9JI98 176 aa6.84□□□□□ -1.31
LINC00544-201ENST00000400540 KIAA1644Q3SXP7 199 aa6.84□□□□□ -1.31
LINC00544-201ENST00000400540 ERASQ7Z444 233 aa6.84□□□□□ -1.31
LINC00544-201ENST00000400540 C3orf22Q8N5N4 141 aa6.84□□□□□ -1.31
LINC00544-201ENST00000400540 SCGB3A1Q96QR1 104 aa6.84□□□□□ -1.31
LINC00544-201ENST00000400540 FAM19A1Q7Z5A9 133 aa6.83□□□□□ -1.32
LINC00544-201ENST00000400540 ANAPC16Q96DE5 110 aa6.83□□□□□ -1.32
LINC00544-201ENST00000400540 TMEM126AQ9H061 195 aa6.83□□□□□ -1.32
LINC00544-201ENST00000400540 MT-ND4LP03901 98 aa6.82□□□□□ -1.32
LINC00544-201ENST00000400540 VPREB1P12018 145 aa6.82□□□□□ -1.32
LINC00544-201ENST00000400540 PFN2P35080 140 aa6.82□□□□□ -1.32
LINC00544-201ENST00000400540 Q8NDZ9 215 aa6.82□□□□□ -1.32
LINC00544-201ENST00000400540 PPDPFQ9H3Y8 114 aa6.82□□□□□ -1.32
LINC00544-201ENST00000400540 G0S2P27469 103 aa6.81□□□□□ -1.32
LINC00544-201ENST00000400540 CST9LQ9H4G1 147 aa6.81□□□□□ -1.32
LINC00544-201ENST00000400540 FSIP2Q5CZC0 6907 aa6.8□□□□□ -1.32
LINC00544-201ENST00000400540 M0R378 163 aa6.8□□□□□ -1.32
LINC00544-201ENST00000400540 ATP5LO75964 103 aa6.8□□□□□ -1.32
LINC00544-201ENST00000400540 PLEKHB2Q96CS7 222 aa6.8□□□□□ -1.32
LINC00544-201ENST00000400540 SND1-IT1Q9HBX3 110 aa6.79□□□□□ -1.32
LINC00544-201ENST00000400540 PMVKQ15126 192 aa6.78□□□□□ -1.32
LINC00544-201ENST00000400540 CBLN2Q8IUK8 224 aa6.78□□□□□ -1.32
LINC00544-201ENST00000400540 RAB14P61106 215 aa6.77□□□□□ -1.33
LINC00544-201ENST00000400540 HIGD2AQ9BW72 106 aa6.77□□□□□ -1.33
LINC00544-201ENST00000400540 ERG28Q9UKR5 140 aa6.77□□□□□ -1.33
LINC00544-201ENST00000400540 IGLV5-39A0A0G2JS06 123 aa6.76□□□□□ -1.33
LINC00544-201ENST00000400540 LINC01546A6NGU7 62 aa6.76□□□□□ -1.33
LINC00544-201ENST00000400540 H3BRM9 83 aa6.76□□□□□ -1.33
LINC00544-201ENST00000400540 CTAG1AP78358 180 aa6.76□□□□□ -1.33
LINC00544-201ENST00000400540 ZNF625Q96I27 306 aaPredicted RBP6.76□□□□□ -1.33
LINC00544-201ENST00000400540 KRTAP4-1Q9BYQ7 146 aa6.76□□□□□ -1.33
LINC00544-201ENST00000400540 MRPL18Q9H0U6 180 aaKnown RBP6.76□□□□□ -1.33
LINC00544-201ENST00000400540 IGLC3P0DOY3 106 aa6.75□□□□□ -1.33
LINC00544-201ENST00000400540 ZNF22P17026 224 aaPredicted RBP6.75□□□□□ -1.33
LINC00544-201ENST00000400540 KRTAP13-3Q3SY46 172 aa6.75□□□□□ -1.33
LINC00544-201ENST00000400540 SPRR4Q96PI1 79 aa6.75□□□□□ -1.33
LINC00544-201ENST00000400540 RPL24P83731 157 aaKnown RBP6.74□□□□□ -1.33
LINC00544-201ENST00000400540 DAND5Q8N907 189 aa6.74□□□□□ -1.33
LINC00544-201ENST00000400540 LINC01549A6NIU2 74 aa6.73□□□□□ -1.33
LINC00544-201ENST00000400540 SPAG11AQ6PDA7 123 aa6.73□□□□□ -1.33
LINC00544-201ENST00000400540 FP248Q71RG6 208 aaPredicted RBP6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms