RNA–Protein interactions for RNA: ENST00000400018.7

SKA3-203, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SKA3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-203ENST00000400018 TMEM170BQ5T4T1 132 aa7.97□□□□□ -1.13
SKA3-203ENST00000400018 SPANXA1Q9NS26 97 aa7.97□□□□□ -1.13
SKA3-203ENST00000400018 NTN5Q8WTR8 489 aaPredicted RBP7.96□□□□□ -1.13
SKA3-203ENST00000400018 CDC42SE2Q9NRR3 84 aa7.96□□□□□ -1.13
SKA3-203ENST00000400018 XCL1P47992 114 aa7.96□□□□□ -1.14
SKA3-203ENST00000400018 UBE2D1P51668 147 aa7.96□□□□□ -1.14
SKA3-203ENST00000400018 PMVKQ15126 192 aa7.96□□□□□ -1.14
SKA3-203ENST00000400018 LINC00526Q96FQ7 95 aa7.96□□□□□ -1.14
SKA3-203ENST00000400018 Q9HAA7 133 aa7.96□□□□□ -1.14
SKA3-203ENST00000400018 KLK5Q9Y337 293 aaPredicted RBP7.95□□□□□ -1.14
SKA3-203ENST00000400018 LYRM7Q5U5X0 104 aa7.94□□□□□ -1.14
SKA3-203ENST00000400018 C5orf38Q86SI9 138 aa7.94□□□□□ -1.14
SKA3-203ENST00000400018 TIMM17AQ99595 171 aa7.94□□□□□ -1.14
SKA3-203ENST00000400018 TEX49A0A1B0GTD5 131 aa7.94□□□□□ -1.14
SKA3-203ENST00000400018 CDKN2A-AS1Q9UH64 79 aa7.94□□□□□ -1.14
SKA3-203ENST00000400018 VPS13DQ5THJ4 4388 aa7.94□□□□□ -1.14
SKA3-203ENST00000400018 TRAV8-4A0A0B4J246 113 aa7.94□□□□□ -1.14
SKA3-203ENST00000400018 M0R2N4 97 aa7.94□□□□□ -1.14
SKA3-203ENST00000400018 SCGB1D4Q6XE38 83 aa7.94□□□□□ -1.14
SKA3-203ENST00000400018 UBE2WQ96B02 151 aa7.94□□□□□ -1.14
SKA3-203ENST00000400018 PLEKHB2Q96CS7 222 aa7.94□□□□□ -1.14
SKA3-203ENST00000400018 F8VRH5 84 aa7.93□□□□□ -1.14
SKA3-203ENST00000400018 AMELXQ99217 191 aa7.93□□□□□ -1.14
SKA3-203ENST00000400018 TSPEAR-AS2P59090 65 aa7.93□□□□□ -1.14
SKA3-203ENST00000400018 LINC00242Q5T6M2 205 aa7.93□□□□□ -1.14
SKA3-203ENST00000400018 LELP1Q5T871 98 aa7.93□□□□□ -1.14
SKA3-203ENST00000400018 TMEM101Q96IK0 257 aa7.92□□□□□ -1.14
SKA3-203ENST00000400018 KRTAP1-5Q9BYS1 174 aa7.92□□□□□ -1.14
SKA3-203ENST00000400018 HERVK_113P63121 156 aa7.92□□□□□ -1.14
SKA3-203ENST00000400018 C9orf153Q5TBE3 101 aa7.92□□□□□ -1.14
SKA3-203ENST00000400018 ZNF815PA8K554 130 aa7.91□□□□□ -1.14
SKA3-203ENST00000400018 CASC10Q5T4H9 136 aa7.91□□□□□ -1.14
SKA3-203ENST00000400018 APLNQ9ULZ1 77 aa7.91□□□□□ -1.14
SKA3-203ENST00000400018 LECT2O14960 151 aa7.91□□□□□ -1.14
SKA3-203ENST00000400018 ZNF22P17026 224 aaPredicted RBP7.91□□□□□ -1.14
SKA3-203ENST00000400018 ENHOQ6UWT2 76 aa7.91□□□□□ -1.14
SKA3-203ENST00000400018 ZNF625Q96I27 306 aaPredicted RBP7.91□□□□□ -1.14
SKA3-203ENST00000400018 DNAH2Q9P225 4427 aa7.9□□□□□ -1.14
SKA3-203ENST00000400018 J3KT08 172 aa7.9□□□□□ -1.14
SKA3-203ENST00000400018 REG3AQ06141 175 aa7.9□□□□□ -1.14
SKA3-203ENST00000400018 C10orf126Q8N4M7 172 aa7.9□□□□□ -1.14
SKA3-203ENST00000400018 PYGO1Q9Y3Y4 419 aa7.9□□□□□ -1.14
SKA3-203ENST00000400018 A0A0U1RRA0 63 aa7.9□□□□□ -1.15
SKA3-203ENST00000400018 CFC1BP0CG36 223 aa7.9□□□□□ -1.15
SKA3-203ENST00000400018 CFC1P0CG37 223 aa7.9□□□□□ -1.15
SKA3-203ENST00000400018 FAM236AA0A1B0GUQ0 79 aa7.89□□□□□ -1.15
SKA3-203ENST00000400018 LINC00959A0A1B0GUT2 108 aa7.89□□□□□ -1.15
SKA3-203ENST00000400018 FAM236BA0A1B0GV22 79 aa7.89□□□□□ -1.15
SKA3-203ENST00000400018 H7C2G1 150 aa7.89□□□□□ -1.15
SKA3-203ENST00000400018 PLNP26678 52 aa7.89□□□□□ -1.15
SKA3-203ENST00000400018 FUSP35637 526 aaKnown RBP eCLIP7.89□□□□□ -1.15
SKA3-203ENST00000400018 TOMM7Q9P0U1 55 aa7.89□□□□□ -1.15
SKA3-203ENST00000400018 FRAS1Q86XX4 4008 aa7.89□□□□□ -1.15
SKA3-203ENST00000400018 KMT2CQ8NEZ4 4911 aaKnown RBP7.88□□□□□ -1.15
SKA3-203ENST00000400018 UBE2DNLQ8IWF7 75 aa7.88□□□□□ -1.15
SKA3-203ENST00000400018 TRAV12-1A0A0B4J245 112 aa7.88□□□□□ -1.15
SKA3-203ENST00000400018 Q9H8V8 135 aa7.87□□□□□ -1.15
SKA3-203ENST00000400018 CCL18P55774 89 aa7.87□□□□□ -1.15
SKA3-203ENST00000400018 OR13C6PQ8NH95 151 aa7.87□□□□□ -1.15
SKA3-203ENST00000400018 CHCHD10Q8WYQ3 142 aaPredicted RBP7.87□□□□□ -1.15
SKA3-203ENST00000400018 C3orf22Q8N5N4 141 aa7.86□□□□□ -1.15
SKA3-203ENST00000400018 PRO1854Q9UHT4 67 aa7.86□□□□□ -1.15
SKA3-203ENST00000400018 H3BNG1 76 aa7.86□□□□□ -1.15
SKA3-203ENST00000400018 MRPS36P82909 103 aaKnown RBP7.86□□□□□ -1.15
SKA3-203ENST00000400018 IGKV2D-24A0A075B6R9 120 aa7.85□□□□□ -1.15
SKA3-203ENST00000400018 NPC2P61916 151 aa7.85□□□□□ -1.15
SKA3-203ENST00000400018 C6orf223Q8N319 242 aa7.85□□□□□ -1.15
SKA3-203ENST00000400018 MUC7Q8TAX7 377 aa7.85□□□□□ -1.15
SKA3-203ENST00000400018 C2orf82Q6UX34 121 aa7.85□□□□□ -1.15
SKA3-203ENST00000400018 DAND5Q8N907 189 aa7.85□□□□□ -1.15
SKA3-203ENST00000400018 LINC01620Q4KN68 170 aa7.84□□□□□ -1.15
SKA3-203ENST00000400018 HIGD2BQ4VC39 106 aa7.84□□□□□ -1.15
SKA3-203ENST00000400018 TIMM21Q9BVV7 248 aa7.84□□□□□ -1.15
SKA3-203ENST00000400018 A0A1B0GUV1 79 aa7.84□□□□□ -1.15
SKA3-203ENST00000400018 TMEM223A0PJW6 202 aa7.84□□□□□ -1.15
SKA3-203ENST00000400018 C4orf26Q17RF5 130 aa7.84□□□□□ -1.15
SKA3-203ENST00000400018 LY6G6CO95867 125 aa7.83□□□□□ -1.16
SKA3-203ENST00000400018 RPL13AP40429 203 aaKnown RBP7.83□□□□□ -1.16
SKA3-203ENST00000400018 A0A1B0GX51 115 aa7.83□□□□□ -1.16
SKA3-203ENST00000400018 CRPP02741 224 aa7.83□□□□□ -1.16
SKA3-203ENST00000400018 IGHV3OR16-9A0A0B4J2B5 98 aa7.82□□□□□ -1.16
SKA3-203ENST00000400018 TRBV7-7A0A0K0K1E9 115 aa7.82□□□□□ -1.16
SKA3-203ENST00000400018 TINCRA0A1B0GVN0 87 aa7.82□□□□□ -1.16
SKA3-203ENST00000400018 SMIM1B2RUZ4 78 aa7.82□□□□□ -1.16
SKA3-203ENST00000400018 UQCRQO14949 82 aa7.82□□□□□ -1.16
SKA3-203ENST00000400018 EIF4EBP3O60516 100 aaPredicted RBP7.82□□□□□ -1.16
SKA3-203ENST00000400018 HRCT1Q6UXD1 115 aa7.82□□□□□ -1.16
SKA3-203ENST00000400018 NUPR2A6NF83 97 aa7.81□□□□□ -1.16
SKA3-203ENST00000400018 C9orf116Q5BN46 136 aaPredicted RBP7.81□□□□□ -1.16
SKA3-203ENST00000400018 PAPPA-AS1Q5QFB9 102 aa7.81□□□□□ -1.16
SKA3-203ENST00000400018 HERVK_113P61574 105 aa7.81□□□□□ -1.16
SKA3-203ENST00000400018 Q1RN00 199 aa7.81□□□□□ -1.16
SKA3-203ENST00000400018 SACSQ9NZJ4 4579 aa7.81□□□□□ -1.16
SKA3-203ENST00000400018 H7C423 109 aa7.8□□□□□ -1.16
SKA3-203ENST00000400018 SS18Q15532 418 aa7.8□□□□□ -1.16
SKA3-203ENST00000400018 ATXN8Q156A1 80 aa7.8□□□□□ -1.16
SKA3-203ENST00000400018 GAGE2AQ6NT46 116 aa7.8□□□□□ -1.16
SKA3-203ENST00000400018 TRBV10-2A0A0K0K1G8 114 aa7.8□□□□□ -1.16
SKA3-203ENST00000400018 J3QQQ9 107 aa7.8□□□□□ -1.16
SKA3-203ENST00000400018 CYSTM1Q9H1C7 97 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 105.8 ms