RNA–Protein interactions for RNA: ENST00000400000.6

VAPA-202, Transcript of VAMP associated protein A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPA, Length 6,815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-202ENST00000400000 CCDC168Q8NDH2 2452 aa9.85□□□□□ -0.83
VAPA-202ENST00000400000 LINC00242Q5T6M2 205 aa9.85□□□□□ -0.83
VAPA-202ENST00000400000 FHL2Q14192 279 aa9.85□□□□□ -0.83
VAPA-202ENST00000400000 POLR2KP53803 58 aaKnown RBP9.84□□□□□ -0.83
VAPA-202ENST00000400000 COX17Q14061 63 aa9.84□□□□□ -0.83
VAPA-202ENST00000400000 DOPEY1Q5JWR5 2465 aa9.83□□□□□ -0.84
VAPA-202ENST00000400000 ATP5EP2Q5VTU8 51 aa9.83□□□□□ -0.84
VAPA-202ENST00000400000 CHCHD7Q9BUK0 85 aa9.83□□□□□ -0.84
VAPA-202ENST00000400000 TSPEAR-AS2P59090 65 aa9.82□□□□□ -0.84
VAPA-202ENST00000400000 PTPRSQ13332 1948 aa9.82□□□□□ -0.84
VAPA-202ENST00000400000 PSPHP1O15172 72 aa9.82□□□□□ -0.84
VAPA-202ENST00000400000 Q8N814 137 aa9.82□□□□□ -0.84
VAPA-202ENST00000400000 A0A087WSZ3 146 aa9.82□□□□□ -0.84
VAPA-202ENST00000400000 MRPS36P82909 103 aaKnown RBP9.82□□□□□ -0.84
VAPA-202ENST00000400000 NTM-AS1Q6ZSK4 140 aa9.82□□□□□ -0.84
VAPA-202ENST00000400000 C2orf48Q96LS8 159 aa9.82□□□□□ -0.84
VAPA-202ENST00000400000 ADAMTSL4-AS1Q5T5F5 129 aa9.81□□□□□ -0.84
VAPA-202ENST00000400000 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.81□□□□□ -0.84
VAPA-202ENST00000400000 LINC00575Q6W349 94 aa9.81□□□□□ -0.84
VAPA-202ENST00000400000 IGKV2D-30A0A075B6S6 120 aa9.81□□□□□ -0.84
VAPA-202ENST00000400000 IGKV2-30P06310 120 aa9.81□□□□□ -0.84
VAPA-202ENST00000400000 WDR87Q6ZQQ6 2873 aa9.81□□□□□ -0.84
VAPA-202ENST00000400000 SMIM1B2RUZ4 78 aa9.8□□□□□ -0.84
VAPA-202ENST00000400000 PLA2G1BP04054 148 aaKnown RBP9.8□□□□□ -0.84
VAPA-202ENST00000400000 SPACA4Q8TDM5 124 aa9.8□□□□□ -0.84
VAPA-202ENST00000400000 IGLV1-51P01701 117 aa9.79□□□□□ -0.84
VAPA-202ENST00000400000 CACNA1AO00555 2505 aa9.79□□□□□ -0.84
VAPA-202ENST00000400000 CPAMD8Q8IZJ3 1885 aa9.79□□□□□ -0.84
VAPA-202ENST00000400000 CRYGAP11844 174 aa9.79□□□□□ -0.84
VAPA-202ENST00000400000 LYPD5Q6UWN5 251 aa9.79□□□□□ -0.84
VAPA-202ENST00000400000 CHTF8P0CG12 524 aa9.79□□□□□ -0.84
VAPA-202ENST00000400000 IGIPA6NJ69 53 aa9.78□□□□□ -0.84
VAPA-202ENST00000400000 Q6ZRU5 148 aa9.78□□□□□ -0.84
VAPA-202ENST00000400000 LRP4O75096 1905 aa9.78□□□□□ -0.84
VAPA-202ENST00000400000 FSTL3O95633 263 aa9.77□□□□□ -0.85
VAPA-202ENST00000400000 MDFIQ99750 246 aa9.77□□□□□ -0.85
VAPA-202ENST00000400000 LINC00337Q8N6G1 96 aa9.76□□□□□ -0.85
VAPA-202ENST00000400000 HCG22E2RYF7 251 aa9.76□□□□□ -0.85
VAPA-202ENST00000400000 EGFEM1PQ0D2K5 195 aa9.76□□□□□ -0.85
VAPA-202ENST00000400000 H0Y9P7 68 aa9.75□□□□□ -0.85
VAPA-202ENST00000400000 V9GYY9 64 aa9.75□□□□□ -0.85
VAPA-202ENST00000400000 MYO18BQ8IUG5 2567 aa9.75□□□□□ -0.85
VAPA-202ENST00000400000 IGF2RP11717 2491 aa9.74□□□□□ -0.85
VAPA-202ENST00000400000 COX7CP15954 63 aa9.73□□□□□ -0.85
VAPA-202ENST00000400000 FHL3Q13643 280 aa9.72□□□□□ -0.85
VAPA-202ENST00000400000 C7orf65Q6ZTY9 151 aa9.72□□□□□ -0.85
VAPA-202ENST00000400000 YPEL4Q96NS1 127 aa9.71□□□□□ -0.85
VAPA-202ENST00000400000 SMCR5Q8TEV8 140 aa9.7□□□□□ -0.86
VAPA-202ENST00000400000 NDUFC1O43677 76 aa9.7□□□□□ -0.86
VAPA-202ENST00000400000 C22orf24Q9Y442 160 aa9.7□□□□□ -0.86
VAPA-202ENST00000400000 NCOR2Q9Y618 2525 aa9.7□□□□□ -0.86
VAPA-202ENST00000400000 PMAIP1Q13794 54 aa9.7□□□□□ -0.86
VAPA-202ENST00000400000 MOBPQ13875 183 aa9.7□□□□□ -0.86
VAPA-202ENST00000400000 Q8N3U1 123 aa9.7□□□□□ -0.86
VAPA-202ENST00000400000 NAV2Q8IVL1 2488 aa9.69□□□□□ -0.86
VAPA-202ENST00000400000 URB1-AS1Q96HZ7 61 aa9.69□□□□□ -0.86
VAPA-202ENST00000400000 CENPFP49454 3210 aa9.69□□□□□ -0.86
VAPA-202ENST00000400000 MUC22E2RYF6 1773 aaPredicted RBP9.68□□□□□ -0.86
VAPA-202ENST00000400000 IGLV8-61A0A075B6I0 122 aa9.68□□□□□ -0.86
VAPA-202ENST00000400000 Q6JHZ5 121 aa9.68□□□□□ -0.86
VAPA-202ENST00000400000 C1orf195Q5TG92 126 aa9.68□□□□□ -0.86
VAPA-202ENST00000400000 C16orf95Q9H693 158 aa9.68□□□□□ -0.86
VAPA-202ENST00000400000 TRBV7-7A0A0K0K1E9 115 aa9.67□□□□□ -0.86
VAPA-202ENST00000400000 ATP5EP56381 51 aaPredicted RBP9.66□□□□□ -0.86
VAPA-202ENST00000400000 C2CD3Q4AC94 2353 aa9.65□□□□□ -0.86
VAPA-202ENST00000400000 PHF5AQ7RTV0 110 aaKnown RBP9.65□□□□□ -0.86
VAPA-202ENST00000400000 KIAA0087Q14695 138 aa9.65□□□□□ -0.86
VAPA-202ENST00000400000 TRAV7A0A075B6U4 112 aa9.64□□□□□ -0.87
VAPA-202ENST00000400000 C16orf90A8MZG2 172 aa9.62□□□□□ -0.87
VAPA-202ENST00000400000 LINC00310P59036 64 aa9.62□□□□□ -0.87
VAPA-202ENST00000400000 SMIM29Q86T20 159 aa9.61□□□□□ -0.87
VAPA-202ENST00000400000 LRRK2Q5S007 2527 aa9.61□□□□□ -0.87
VAPA-202ENST00000400000 KRTAP24-1Q3LI83 254 aa9.6□□□□□ -0.87
VAPA-202ENST00000400000 UTRNP46939 3433 aa9.6□□□□□ -0.87
VAPA-202ENST00000400000 IMUPQ9GZP8 106 aa9.59□□□□□ -0.87
VAPA-202ENST00000400000 C1orf64Q8NEQ6 169 aa9.59□□□□□ -0.87
VAPA-202ENST00000400000 CNFNQ9BYD5 112 aa9.59□□□□□ -0.87
VAPA-202ENST00000400000 JMJD1CQ15652 2540 aa9.59□□□□□ -0.87
VAPA-202ENST00000400000 AMELXQ99217 191 aa9.59□□□□□ -0.87
VAPA-202ENST00000400000 LIMD2Q9BT23 127 aa9.59□□□□□ -0.87
VAPA-202ENST00000400000 RPL37AP61513 92 aaKnown RBP9.58□□□□□ -0.88
VAPA-202ENST00000400000 LINC00846Q9NV44 126 aa9.58□□□□□ -0.88
VAPA-202ENST00000400000 FAM229AH3BQW9 127 aa9.58□□□□□ -0.88
VAPA-202ENST00000400000 J3QL48 77 aa9.58□□□□□ -0.88
VAPA-202ENST00000400000 NHLRC4P0CG21 123 aaPredicted RBP9.58□□□□□ -0.88
VAPA-202ENST00000400000 SERTAD4-AS1Q5TG53 156 aa9.58□□□□□ -0.88
VAPA-202ENST00000400000 LINC00167Q96N53 147 aa9.56□□□□□ -0.88
VAPA-202ENST00000400000 PTPRBP23467 1997 aa9.56□□□□□ -0.88
VAPA-202ENST00000400000 SMIM26A0A096LP01 95 aa9.55□□□□□ -0.88
VAPA-202ENST00000400000 hDV103S1A0JD37 113 aa9.55□□□□□ -0.88
VAPA-202ENST00000400000 LINC00315P59091 139 aa9.55□□□□□ -0.88
VAPA-202ENST00000400000 RTL8CO15255 209 aa9.54□□□□□ -0.88
VAPA-202ENST00000400000 MUC7Q8TAX7 377 aa9.54□□□□□ -0.88
VAPA-202ENST00000400000 ZFYVE26Q68DK2 2539 aa9.54□□□□□ -0.88
VAPA-202ENST00000400000 TYMSOSQ8TAI1 123 aa9.53□□□□□ -0.88
VAPA-202ENST00000400000 A0A1B0GUV1 79 aa9.53□□□□□ -0.88
VAPA-202ENST00000400000 COL27A1Q8IZC6 1860 aaPredicted RBP9.52□□□□□ -0.88
VAPA-202ENST00000400000 C6orf48Q9UBA6 75 aa9.52□□□□□ -0.88
VAPA-202ENST00000400000 ST20-AS1Q8NBB2 130 aa9.52□□□□□ -0.89
VAPA-202ENST00000400000 A0A096LNJ9 63 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms