RNA–Protein interactions for RNA: ENST00000399649.5

CACNA1C-219, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,529 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-219ENST00000399649 CNOT1A5YKK6 2376 aaKnown RBP8.71□□□□□ -1.02
CACNA1C-219ENST00000399649 PLCE1Q9P212 2302 aa8.71□□□□□ -1.02
CACNA1C-219ENST00000399649 TNCP24821 2201 aa8.7□□□□□ -1.02
CACNA1C-219ENST00000399649 A8MTW9 85 aa8.7□□□□□ -1.02
CACNA1C-219ENST00000399649 Q6ZSN1 163 aa8.7□□□□□ -1.02
CACNA1C-219ENST00000399649 TP53AIP1Q9HCN2 124 aa8.7□□□□□ -1.02
CACNA1C-219ENST00000399649 ZNF580Q9UK33 172 aa8.7□□□□□ -1.02
CACNA1C-219ENST00000399649 NHLRC4P0CG21 123 aaPredicted RBP8.7□□□□□ -1.02
CACNA1C-219ENST00000399649 URB1-AS1Q96HZ7 61 aa8.69□□□□□ -1.02
CACNA1C-219ENST00000399649 CEP192Q8TEP8 1941 aa8.69□□□□□ -1.02
CACNA1C-219ENST00000399649 SPACA4Q8TDM5 124 aa8.69□□□□□ -1.02
CACNA1C-219ENST00000399649 LINC00846Q9NV44 126 aa8.69□□□□□ -1.02
CACNA1C-219ENST00000399649 ATG2AQ2TAZ0 1938 aa8.69□□□□□ -1.02
CACNA1C-219ENST00000399649 MED12LQ86YW9 2145 aa8.69□□□□□ -1.02
CACNA1C-219ENST00000399649 KIAA0087Q14695 138 aa8.68□□□□□ -1.02
CACNA1C-219ENST00000399649 KRTAP10-9P60411 292 aa8.67□□□□□ -1.02
CACNA1C-219ENST00000399649 C6orf48Q9UBA6 75 aa8.67□□□□□ -1.02
CACNA1C-219ENST00000399649 RAI1Q7Z5J4 1906 aaPredicted RBP8.67□□□□□ -1.02
CACNA1C-219ENST00000399649 SRCAPQ6ZRS2 3230 aa8.66□□□□□ -1.02
CACNA1C-219ENST00000399649 MOBPQ13875 183 aa8.66□□□□□ -1.02
CACNA1C-219ENST00000399649 EML5Q05BV3 1969 aa8.66□□□□□ -1.02
CACNA1C-219ENST00000399649 CDSNQ15517 529 aa8.66□□□□□ -1.02
CACNA1C-219ENST00000399649 SPTAN1Q13813 2472 aaKnown RBP8.66□□□□□ -1.02
CACNA1C-219ENST00000399649 SHANK1Q9Y566 2161 aa8.65□□□□□ -1.02
CACNA1C-219ENST00000399649 HCFC1P51610 2035 aa8.65□□□□□ -1.02
CACNA1C-219ENST00000399649 SPINT4Q6UDR6 99 aa8.65□□□□□ -1.03
CACNA1C-219ENST00000399649 NOTCH3Q9UM47 2321 aa8.63□□□□□ -1.03
CACNA1C-219ENST00000399649 LINC00310P59036 64 aa8.63□□□□□ -1.03
CACNA1C-219ENST00000399649 FHL3Q13643 280 aa8.63□□□□□ -1.03
CACNA1C-219ENST00000399649 PCNX1Q96RV3 2341 aa8.63□□□□□ -1.03
CACNA1C-219ENST00000399649 SPATA3Q8NHX4 192 aa8.63□□□□□ -1.03
CACNA1C-219ENST00000399649 MDFIQ99750 246 aa8.62□□□□□ -1.03
CACNA1C-219ENST00000399649 COX8CQ7Z4L0 72 aa8.61□□□□□ -1.03
CACNA1C-219ENST00000399649 LINC00313P59037 77 aa8.61□□□□□ -1.03
CACNA1C-219ENST00000399649 TECTAO75443 2155 aa8.6□□□□□ -1.03
CACNA1C-219ENST00000399649 PCNX3Q9H6A9 2034 aa8.6□□□□□ -1.03
CACNA1C-219ENST00000399649 PRO0628Q9UI54 55 aa8.6□□□□□ -1.03
CACNA1C-219ENST00000399649 FAM229AH3BQW9 127 aa8.6□□□□□ -1.03
CACNA1C-219ENST00000399649 EXPH5Q8NEV8 1989 aa8.59□□□□□ -1.03
CACNA1C-219ENST00000399649 PCDH15Q96QU1 1955 aa8.59□□□□□ -1.03
CACNA1C-219ENST00000399649 FREM1Q5H8C1 2179 aa8.59□□□□□ -1.03
CACNA1C-219ENST00000399649 LINC00167Q96N53 147 aa8.58□□□□□ -1.04
CACNA1C-219ENST00000399649 ATP11AUNQ6ZP68 121 aa8.58□□□□□ -1.04
CACNA1C-219ENST00000399649 C8orf87E5RJ46 101 aa8.57□□□□□ -1.04
CACNA1C-219ENST00000399649 H3BPC8 53 aa8.57□□□□□ -1.04
CACNA1C-219ENST00000399649 GVINP1Q7Z2Y8 2422 aa8.57□□□□□ -1.04
CACNA1C-219ENST00000399649 Q8NBF4 154 aa8.56□□□□□ -1.04
CACNA1C-219ENST00000399649 TYMSOSQ8TAI1 123 aa8.56□□□□□ -1.04
CACNA1C-219ENST00000399649 A0A096LNJ9 63 aa8.55□□□□□ -1.04
CACNA1C-219ENST00000399649 BCE1O60756 84 aa8.55□□□□□ -1.04
CACNA1C-219ENST00000399649 C11orf72Q8NBR9 251 aa8.55□□□□□ -1.04
CACNA1C-219ENST00000399649 CREBBPQ92793 2442 aa8.55□□□□□ -1.04
CACNA1C-219ENST00000399649 A0A1B0GW54 56 aa8.55□□□□□ -1.04
CACNA1C-219ENST00000399649 KIF25-AS1Q9Y6Z4 181 aa8.55□□□□□ -1.04
CACNA1C-219ENST00000399649 IGLV8-61A0A075B6I0 122 aa8.54□□□□□ -1.04
CACNA1C-219ENST00000399649 VPREB1P12018 145 aa8.54□□□□□ -1.04
CACNA1C-219ENST00000399649 ARHGAP32A7KAX9 2087 aa8.54□□□□□ -1.04
CACNA1C-219ENST00000399649 TRAV22A0A0B4J277 110 aa8.54□□□□□ -1.04
CACNA1C-219ENST00000399649 HIVEP2P31629 2446 aa8.53□□□□□ -1.04
CACNA1C-219ENST00000399649 ELOF1P60002 83 aaKnown RBP8.53□□□□□ -1.04
CACNA1C-219ENST00000399649 PHF5AQ7RTV0 110 aaKnown RBP8.53□□□□□ -1.04
CACNA1C-219ENST00000399649 IGLV5-39A0A0G2JS06 123 aa8.53□□□□□ -1.04
CACNA1C-219ENST00000399649 Q96NJ1 140 aa8.53□□□□□ -1.04
CACNA1C-219ENST00000399649 CPAMD8Q8IZJ3 1885 aa8.52□□□□□ -1.04
CACNA1C-219ENST00000399649 RTL8CO15255 209 aa8.52□□□□□ -1.05
CACNA1C-219ENST00000399649 MUC22E2RYF6 1773 aaPredicted RBP8.52□□□□□ -1.05
CACNA1C-219ENST00000399649 LINC00476Q8WZB0 136 aa8.52□□□□□ -1.05
CACNA1C-219ENST00000399649 CDIP1Q9H305 208 aa8.52□□□□□ -1.05
CACNA1C-219ENST00000399649 CHTF8P0CG12 524 aa8.51□□□□□ -1.05
CACNA1C-219ENST00000399649 Q6ZRP5 223 aa8.51□□□□□ -1.05
CACNA1C-219ENST00000399649 LINC01546A6NGU7 62 aa8.5□□□□□ -1.05
CACNA1C-219ENST00000399649 C4orf26Q17RF5 130 aa8.5□□□□□ -1.05
CACNA1C-219ENST00000399649 LRP4O75096 1905 aa8.5□□□□□ -1.05
CACNA1C-219ENST00000399649 PTPRSQ13332 1948 aa8.5□□□□□ -1.05
CACNA1C-219ENST00000399649 RIF1Q5UIP0 2472 aaKnown RBP8.49□□□□□ -1.05
CACNA1C-219ENST00000399649 ADAMTS20P59510 1910 aa8.49□□□□□ -1.05
CACNA1C-219ENST00000399649 COL5A1P20908 1838 aaPredicted RBP8.49□□□□□ -1.05
CACNA1C-219ENST00000399649 Q6ZQT0 140 aa8.49□□□□□ -1.05
CACNA1C-219ENST00000399649 EPM2AB3EWF7 344 aa8.48□□□□□ -1.05
CACNA1C-219ENST00000399649 Q6ZRX8 168 aa8.48□□□□□ -1.05
CACNA1C-219ENST00000399649 SSBP3-AS1Q7Z2R9 100 aa8.48□□□□□ -1.05
CACNA1C-219ENST00000399649 GPR179Q6PRD1 2367 aa8.48□□□□□ -1.05
CACNA1C-219ENST00000399649 LOC110117498A0A087WWA1 95 aa8.48□□□□□ -1.05
CACNA1C-219ENST00000399649 RPL37AP61513 92 aaKnown RBP8.47□□□□□ -1.05
CACNA1C-219ENST00000399649 IGHV3OR16-9A0A0B4J2B5 98 aa8.47□□□□□ -1.05
CACNA1C-219ENST00000399649 C16orf90A8MZG2 172 aa8.46□□□□□ -1.05
CACNA1C-219ENST00000399649 H3BNG1 76 aa8.46□□□□□ -1.05
CACNA1C-219ENST00000399649 LINC00315P59091 139 aa8.46□□□□□ -1.06
CACNA1C-219ENST00000399649 PRR14LQ5THK1 2151 aa8.45□□□□□ -1.06
CACNA1C-219ENST00000399649 AGRNO00468 2067 aa8.45□□□□□ -1.06
CACNA1C-219ENST00000399649 PRRC2AP48634 2157 aaKnown RBP8.45□□□□□ -1.06
CACNA1C-219ENST00000399649 LOC101927531A0A1B0GV80 90 aa8.45□□□□□ -1.06
CACNA1C-219ENST00000399649 FAM218AQ96MZ4 157 aa8.44□□□□□ -1.06
CACNA1C-219ENST00000399649 J3QL48 77 aa8.44□□□□□ -1.06
CACNA1C-219ENST00000399649 MED13LQ71F56 2210 aa8.43□□□□□ -1.06
CACNA1C-219ENST00000399649 CACNA1HO95180 2353 aa8.43□□□□□ -1.06
CACNA1C-219ENST00000399649 ST20-AS1Q8NBB2 130 aa8.43□□□□□ -1.06
CACNA1C-219ENST00000399649 RPS28P62857 69 aaKnown RBP8.43□□□□□ -1.06
CACNA1C-219ENST00000399649 APLNQ9ULZ1 77 aa8.42□□□□□ -1.06
CACNA1C-219ENST00000399649 A0A1W2PPR1 153 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms