RNA–Protein interactions for RNA: ENST00000399275.6

SMAD9-203, Transcript of SMAD family member 9, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMAD9, Length 5,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-203ENST00000399275 H3BPC8 53 aa6.9□□□□□ -1.31
SMAD9-203ENST00000399275 OTOGLQ3ZCN5 2332 aa6.9□□□□□ -1.31
SMAD9-203ENST00000399275 Q6ZTC4 211 aa6.89□□□□□ -1.31
SMAD9-203ENST00000399275 PROK1P58294 105 aa6.88□□□□□ -1.31
SMAD9-203ENST00000399275 KLKP1Q107X0 134 aa6.88□□□□□ -1.31
SMAD9-203ENST00000399275 Q6ZTI0 123 aa6.88□□□□□ -1.31
SMAD9-203ENST00000399275 BRCA2P51587 3418 aa6.88□□□□□ -1.31
SMAD9-203ENST00000399275 IGHV6-1A0A0B4J1U7 121 aa6.88□□□□□ -1.31
SMAD9-203ENST00000399275 ERC2-IT1O76042 136 aa6.88□□□□□ -1.31
SMAD9-203ENST00000399275 Q8NA96 180 aa6.88□□□□□ -1.31
SMAD9-203ENST00000399275 LOC100131303A0A0U1RQF7 123 aa6.88□□□□□ -1.31
SMAD9-203ENST00000399275 Q8IZM0 81 aa6.88□□□□□ -1.31
SMAD9-203ENST00000399275 SMIM1B2RUZ4 78 aa6.87□□□□□ -1.31
SMAD9-203ENST00000399275 LINC00242Q5T6M2 205 aa6.87□□□□□ -1.31
SMAD9-203ENST00000399275 UQCR11O14957 56 aa6.87□□□□□ -1.31
SMAD9-203ENST00000399275 SYCNQ0VAF6 134 aa6.87□□□□□ -1.31
SMAD9-203ENST00000399275 LINC01554Q52M75 96 aa6.87□□□□□ -1.31
SMAD9-203ENST00000399275 BRI3O95415 125 aa6.86□□□□□ -1.31
SMAD9-203ENST00000399275 PRLHP81277 87 aa6.86□□□□□ -1.31
SMAD9-203ENST00000399275 C11orf71Q6IPW1 123 aa6.86□□□□□ -1.31
SMAD9-203ENST00000399275 HTTP42858 3142 aa6.86□□□□□ -1.31
SMAD9-203ENST00000399275 A0A087WSZ3 146 aa6.86□□□□□ -1.31
SMAD9-203ENST00000399275 CDSNQ15517 529 aa6.86□□□□□ -1.31
SMAD9-203ENST00000399275 MAPK1IP1LQ8NDC0 245 aa6.86□□□□□ -1.31
SMAD9-203ENST00000399275 PLA2G1BP04054 148 aaKnown RBP6.86□□□□□ -1.31
SMAD9-203ENST00000399275 FHL3Q13643 280 aa6.86□□□□□ -1.31
SMAD9-203ENST00000399275 LINC00959A0A1B0GUT2 108 aa6.85□□□□□ -1.31
SMAD9-203ENST00000399275 H7BZZ5 65 aa6.85□□□□□ -1.31
SMAD9-203ENST00000399275 ZNF580Q9UK33 172 aa6.85□□□□□ -1.31
SMAD9-203ENST00000399275 ZNF462Q96JM2 2506 aa6.85□□□□□ -1.31
SMAD9-203ENST00000399275 PRR3P79522 188 aaKnown RBP6.85□□□□□ -1.31
SMAD9-203ENST00000399275 CHCHD7Q9BUK0 85 aa6.85□□□□□ -1.31
SMAD9-203ENST00000399275 C6orf48Q9UBA6 75 aa6.85□□□□□ -1.31
SMAD9-203ENST00000399275 IGLV8-61A0A075B6I0 122 aa6.85□□□□□ -1.31
SMAD9-203ENST00000399275 SPATA3Q8NHX4 192 aa6.85□□□□□ -1.31
SMAD9-203ENST00000399275 PCNX1Q96RV3 2341 aa6.84□□□□□ -1.31
SMAD9-203ENST00000399275 SMCR5Q8TEV8 140 aa6.84□□□□□ -1.31
SMAD9-203ENST00000399275 AGRNO00468 2067 aa6.84□□□□□ -1.31
SMAD9-203ENST00000399275 C19orf84I3L1E1 186 aa6.84□□□□□ -1.31
SMAD9-203ENST00000399275 IGLV1-40P01703 118 aa6.84□□□□□ -1.31
SMAD9-203ENST00000399275 RPL37AP8A6NKH3 93 aa6.84□□□□□ -1.32
SMAD9-203ENST00000399275 CDC42SE2Q9NRR3 84 aa6.84□□□□□ -1.32
SMAD9-203ENST00000399275 C2CD3Q4AC94 2353 aa6.83□□□□□ -1.32
SMAD9-203ENST00000399275 COA5Q86WW8 74 aa6.83□□□□□ -1.32
SMAD9-203ENST00000399275 KIF25-AS1Q9Y6Z4 181 aa6.83□□□□□ -1.32
SMAD9-203ENST00000399275 TP53AIP1Q9HCN2 124 aa6.83□□□□□ -1.32
SMAD9-203ENST00000399275 LINC00337Q8N6G1 96 aa6.82□□□□□ -1.32
SMAD9-203ENST00000399275 PRO3102Q9H379 93 aa6.82□□□□□ -1.32
SMAD9-203ENST00000399275 DEFB114Q30KQ6 69 aa6.82□□□□□ -1.32
SMAD9-203ENST00000399275 IGLV9-49A0A0B4J1Y8 123 aa6.82□□□□□ -1.32
SMAD9-203ENST00000399275 LINC01600Q96MT4 127 aa6.82□□□□□ -1.32
SMAD9-203ENST00000399275 PRRC2AP48634 2157 aaKnown RBP6.82□□□□□ -1.32
SMAD9-203ENST00000399275 C5orf42Q9H799 3197 aa6.82□□□□□ -1.32
SMAD9-203ENST00000399275 KPRPQ5T749 579 aaPredicted RBP6.82□□□□□ -1.32
SMAD9-203ENST00000399275 CDC42SE1Q9NRR8 79 aa6.82□□□□□ -1.32
SMAD9-203ENST00000399275 ELOF1P60002 83 aaKnown RBP6.82□□□□□ -1.32
SMAD9-203ENST00000399275 MIR22HGQ0VDD5 57 aa6.82□□□□□ -1.32
SMAD9-203ENST00000399275 ZNF702PQ9H963 129 aa6.82□□□□□ -1.32
SMAD9-203ENST00000399275 CRIPTQ9P021 101 aa6.81□□□□□ -1.32
SMAD9-203ENST00000399275 TET2Q6N021 2002 aaPredicted RBP6.81□□□□□ -1.32
SMAD9-203ENST00000399275 C14orf177Q52M58 125 aa6.81□□□□□ -1.32
SMAD9-203ENST00000399275 NBASA2RRP1 2371 aa6.8□□□□□ -1.32
SMAD9-203ENST00000399275 COX6A2Q02221 97 aa6.8□□□□□ -1.32
SMAD9-203ENST00000399275 DEFB4AO15263 64 aa6.79□□□□□ -1.32
SMAD9-203ENST00000399275 CYSRT1A8MQ03 144 aa6.79□□□□□ -1.32
SMAD9-203ENST00000399275 CNOT1A5YKK6 2376 aaKnown RBP6.79□□□□□ -1.32
SMAD9-203ENST00000399275 TECTAO75443 2155 aa6.78□□□□□ -1.32
SMAD9-203ENST00000399275 Q6ZQT0 140 aa6.78□□□□□ -1.32
SMAD9-203ENST00000399275 Q8N2B8 174 aa6.78□□□□□ -1.32
SMAD9-203ENST00000399275 Q6YL49 198 aa6.78□□□□□ -1.32
SMAD9-203ENST00000399275 LINC00315P59091 139 aa6.77□□□□□ -1.32
SMAD9-203ENST00000399275 C9orf66Q5T8R8 295 aa6.77□□□□□ -1.32
SMAD9-203ENST00000399275 FAM218AQ96MZ4 157 aa6.77□□□□□ -1.32
SMAD9-203ENST00000399275 UNQ6190/PRO20217Q6UXQ8 127 aa6.77□□□□□ -1.33
SMAD9-203ENST00000399275 WDR87Q6ZQQ6 2873 aa6.76□□□□□ -1.33
SMAD9-203ENST00000399275 A8MTW9 85 aa6.76□□□□□ -1.33
SMAD9-203ENST00000399275 ADAMTS20P59510 1910 aa6.76□□□□□ -1.33
SMAD9-203ENST00000399275 A0A1B0GW54 56 aa6.76□□□□□ -1.33
SMAD9-203ENST00000399275 DEFB135Q30KP9 77 aa6.76□□□□□ -1.33
SMAD9-203ENST00000399275 LOC110117498A0A087WWA1 95 aa6.76□□□□□ -1.33
SMAD9-203ENST00000399275 IGLV5-39A0A0G2JS06 123 aa6.76□□□□□ -1.33
SMAD9-203ENST00000399275 RAI1Q7Z5J4 1906 aaPredicted RBP6.76□□□□□ -1.33
SMAD9-203ENST00000399275 Q9BRP9 147 aa6.75□□□□□ -1.33
SMAD9-203ENST00000399275 DSCAMO60469 2012 aa6.75□□□□□ -1.33
SMAD9-203ENST00000399275 AVPP01185 164 aa6.75□□□□□ -1.33
SMAD9-203ENST00000399275 DEFB113Q30KQ7 82 aa6.74□□□□□ -1.33
SMAD9-203ENST00000399275 Q5XG85 94 aa6.74□□□□□ -1.33
SMAD9-203ENST00000399275 Q6ZRU5 148 aa6.74□□□□□ -1.33
SMAD9-203ENST00000399275 EGFEM1PQ0D2K5 195 aa6.73□□□□□ -1.33
SMAD9-203ENST00000399275 LUZP6Q538Z0 58 aa6.73□□□□□ -1.33
SMAD9-203ENST00000399275 LINC01006Q8NI28 216 aa6.73□□□□□ -1.33
SMAD9-203ENST00000399275 BBC3Q96PG8 261 aaPredicted RBP6.73□□□□□ -1.33
SMAD9-203ENST00000399275 MUC4Q99102 2169 aa6.73□□□□□ -1.33
SMAD9-203ENST00000399275 C10orf99Q6UWK7 81 aa6.73□□□□□ -1.33
SMAD9-203ENST00000399275 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.73□□□□□ -1.33
SMAD9-203ENST00000399275 IGLV5-45A0A087WSX0 123 aa6.73□□□□□ -1.33
SMAD9-203ENST00000399275 C11orf72Q8NBR9 251 aa6.73□□□□□ -1.33
SMAD9-203ENST00000399275 IGKV2D-30A0A075B6S6 120 aa6.72□□□□□ -1.33
SMAD9-203ENST00000399275 IGKV2-30P06310 120 aa6.72□□□□□ -1.33
SMAD9-203ENST00000399275 CHD7Q9P2D1 2997 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms