RNA–Protein interactions for RNA: ENST00000399050.8

CTNND1-205, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,313 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-205ENST00000399050 CXCL6P80162 114 aa6.13□□□□□ -1.43
CTNND1-205ENST00000399050 PTPRBP23467 1997 aa6.13□□□□□ -1.43
CTNND1-205ENST00000399050 BRI3O95415 125 aa6.13□□□□□ -1.43
CTNND1-205ENST00000399050 TRAV10A0A0B4J240 114 aa6.13□□□□□ -1.43
CTNND1-205ENST00000399050 ESRGQ1W209 222 aa6.13□□□□□ -1.43
CTNND1-205ENST00000399050 ZNF706Q9Y5V0 76 aaPredicted RBP6.12□□□□□ -1.43
CTNND1-205ENST00000399050 Q8N2B8 174 aa6.12□□□□□ -1.43
CTNND1-205ENST00000399050 IGLV5-39A0A0G2JS06 123 aa6.12□□□□□ -1.43
CTNND1-205ENST00000399050 REG3GQ6UW15 175 aa6.12□□□□□ -1.43
CTNND1-205ENST00000399050 X6R8D5 127 aa6.12□□□□□ -1.43
CTNND1-205ENST00000399050 INAFM1C9JVW0 142 aa6.11□□□□□ -1.43
CTNND1-205ENST00000399050 LINC00315P59091 139 aa6.11□□□□□ -1.43
CTNND1-205ENST00000399050 FAM218AQ96MZ4 157 aa6.11□□□□□ -1.43
CTNND1-205ENST00000399050 RPS28P62857 69 aaKnown RBP6.11□□□□□ -1.43
CTNND1-205ENST00000399050 H0Y9P7 68 aa6.11□□□□□ -1.43
CTNND1-205ENST00000399050 ATRXP46100 2492 aa6.1□□□□□ -1.43
CTNND1-205ENST00000399050 LINC01561Q8N1V8 128 aa6.1□□□□□ -1.43
CTNND1-205ENST00000399050 FAM19A4Q96LR4 140 aa6.1□□□□□ -1.43
CTNND1-205ENST00000399050 DEFB116Q30KQ4 102 aa6.1□□□□□ -1.43
CTNND1-205ENST00000399050 PCOTHQ58A44 107 aa6.1□□□□□ -1.43
CTNND1-205ENST00000399050 A0A1B0GUV1 79 aa6.09□□□□□ -1.43
CTNND1-205ENST00000399050 HCG22E2RYF7 251 aa6.09□□□□□ -1.43
CTNND1-205ENST00000399050 WNK1Q9H4A3 2382 aa6.09□□□□□ -1.43
CTNND1-205ENST00000399050 ANKHD1Q8IWZ3 2542 aaKnown RBP6.09□□□□□ -1.44
CTNND1-205ENST00000399050 SMIM29Q86T20 159 aa6.08□□□□□ -1.44
CTNND1-205ENST00000399050 SPATA3Q8NHX4 192 aa6.08□□□□□ -1.44
CTNND1-205ENST00000399050 IGLV1-51P01701 117 aa6.07□□□□□ -1.44
CTNND1-205ENST00000399050 SORL1Q92673 2214 aa6.07□□□□□ -1.44
CTNND1-205ENST00000399050 IGHV6-1A0A0B4J1U7 121 aa6.07□□□□□ -1.44
CTNND1-205ENST00000399050 Q9BRP9 147 aa6.07□□□□□ -1.44
CTNND1-205ENST00000399050 C11orf72Q8NBR9 251 aa6.06□□□□□ -1.44
CTNND1-205ENST00000399050 IL17DQ8TAD2 202 aa6.06□□□□□ -1.44
CTNND1-205ENST00000399050 PRO3102Q9H379 93 aa6.06□□□□□ -1.44
CTNND1-205ENST00000399050 A0A087WSZ3 146 aa6.06□□□□□ -1.44
CTNND1-205ENST00000399050 LY6G6DO95868 133 aa6.06□□□□□ -1.44
CTNND1-205ENST00000399050 hDV103S1A0JD37 113 aa6.06□□□□□ -1.44
CTNND1-205ENST00000399050 BCE1O60756 84 aa6.06□□□□□ -1.44
CTNND1-205ENST00000399050 Q9UF83 564 aa6.05□□□□□ -1.44
CTNND1-205ENST00000399050 ZFHX2Q9C0A1 2572 aaPredicted RBP6.05□□□□□ -1.44
CTNND1-205ENST00000399050 IGLV5-45A0A087WSX0 123 aa6.05□□□□□ -1.44
CTNND1-205ENST00000399050 C7orf33Q8WU49 177 aa6.05□□□□□ -1.44
CTNND1-205ENST00000399050 SMCR5Q8TEV8 140 aa6.05□□□□□ -1.44
CTNND1-205ENST00000399050 LINC00474Q9P2X8 69 aa6.05□□□□□ -1.44
CTNND1-205ENST00000399050 A0A1W2PPR1 153 aa6.05□□□□□ -1.44
CTNND1-205ENST00000399050 M0R2N4 97 aa6.04□□□□□ -1.44
CTNND1-205ENST00000399050 Q6ZRU5 148 aa6.04□□□□□ -1.44
CTNND1-205ENST00000399050 C2orf48Q96LS8 159 aa6.04□□□□□ -1.44
CTNND1-205ENST00000399050 FHL3Q13643 280 aa6.04□□□□□ -1.44
CTNND1-205ENST00000399050 OXLD1Q5BKU9 147 aa6.04□□□□□ -1.44
CTNND1-205ENST00000399050 IGHV3OR16-9A0A0B4J2B5 98 aa6.03□□□□□ -1.44
CTNND1-205ENST00000399050 F8WDY8 70 aa6.03□□□□□ -1.44
CTNND1-205ENST00000399050 SPINT4Q6UDR6 99 aa6.03□□□□□ -1.44
CTNND1-205ENST00000399050 KIAA0087Q14695 138 aa6.03□□□□□ -1.44
CTNND1-205ENST00000399050 Q6ZQT0 140 aa6.03□□□□□ -1.44
CTNND1-205ENST00000399050 SPINK1P00995 79 aa6.03□□□□□ -1.44
CTNND1-205ENST00000399050 RETNLBQ9BQ08 111 aa6.03□□□□□ -1.44
CTNND1-205ENST00000399050 COL27A1Q8IZC6 1860 aaPredicted RBP6.03□□□□□ -1.44
CTNND1-205ENST00000399050 LIMD2Q9BT23 127 aa6.03□□□□□ -1.44
CTNND1-205ENST00000399050 LYPD5Q6UWN5 251 aa6.02□□□□□ -1.45
CTNND1-205ENST00000399050 C1orf64Q8NEQ6 169 aa6.02□□□□□ -1.45
CTNND1-205ENST00000399050 PTPRQQ9UMZ3 2332 aa6.01□□□□□ -1.45
CTNND1-205ENST00000399050 LITAFQ99732 161 aa6.01□□□□□ -1.45
CTNND1-205ENST00000399050 CIRBP-AS1Q8TBR5 109 aa6.01□□□□□ -1.45
CTNND1-205ENST00000399050 Q6ZTC4 211 aa6.01□□□□□ -1.45
CTNND1-205ENST00000399050 EP400Q96L91 3159 aa6.01□□□□□ -1.45
CTNND1-205ENST00000399050 LOC110117498A0A087WWA1 95 aa6□□□□□ -1.45
CTNND1-205ENST00000399050 TM2D3Q9BRN9 247 aa6□□□□□ -1.45
CTNND1-205ENST00000399050 C16orf95Q9H693 158 aa5.99□□□□□ -1.45
CTNND1-205ENST00000399050 PRLHP81277 87 aa5.98□□□□□ -1.45
CTNND1-205ENST00000399050 CSPG4Q6UVK1 2322 aa5.98□□□□□ -1.45
CTNND1-205ENST00000399050 FAM208BQ5VWN6 2430 aa5.98□□□□□ -1.45
CTNND1-205ENST00000399050 C22orf24Q9Y442 160 aa5.98□□□□□ -1.45
CTNND1-205ENST00000399050 ELOF1P60002 83 aaKnown RBP5.97□□□□□ -1.45
CTNND1-205ENST00000399050 KRTAP10-9P60411 292 aa5.97□□□□□ -1.45
CTNND1-205ENST00000399050 SPAG11AQ6PDA7 123 aa5.97□□□□□ -1.45
CTNND1-205ENST00000399050 NHLRC4P0CG21 123 aaPredicted RBP5.97□□□□□ -1.45
CTNND1-205ENST00000399050 C6orf48Q9UBA6 75 aa5.97□□□□□ -1.45
CTNND1-205ENST00000399050 SMR3AQ99954 134 aa5.96□□□□□ -1.45
CTNND1-205ENST00000399050 HIVEP2P31629 2446 aa5.96□□□□□ -1.46
CTNND1-205ENST00000399050 LINC01556Q5JQF7 62 aa5.95□□□□□ -1.46
CTNND1-205ENST00000399050 SPG11Q96JI7 2443 aa5.95□□□□□ -1.46
CTNND1-205ENST00000399050 PCSK5Q92824 1860 aa5.95□□□□□ -1.46
CTNND1-205ENST00000399050 LINC00167Q96N53 147 aa5.92□□□□□ -1.46
CTNND1-205ENST00000399050 A0A1B0GW54 56 aa5.92□□□□□ -1.46
CTNND1-205ENST00000399050 A0A1B0GU69 56 aa5.92□□□□□ -1.46
CTNND1-205ENST00000399050 COL4A2P08572 1712 aa5.92□□□□□ -1.46
CTNND1-205ENST00000399050 FSHBP01225 129 aa5.91□□□□□ -1.46
CTNND1-205ENST00000399050 MUC6Q6W4X9 2439 aa5.91□□□□□ -1.46
CTNND1-205ENST00000399050 TP53AIP1Q9HCN2 124 aa5.91□□□□□ -1.46
CTNND1-205ENST00000399050 LY6G6CO95867 125 aa5.9□□□□□ -1.46
CTNND1-205ENST00000399050 C2CD3Q4AC94 2353 aa5.9□□□□□ -1.46
CTNND1-205ENST00000399050 EIF4EBP3O60516 100 aaPredicted RBP5.9□□□□□ -1.46
CTNND1-205ENST00000399050 Q8NBF4 154 aa5.9□□□□□ -1.46
CTNND1-205ENST00000399050 LINC00476Q8WZB0 136 aa5.9□□□□□ -1.47
CTNND1-205ENST00000399050 IGLV5-52A0A0A0MRZ9 124 aa5.9□□□□□ -1.47
CTNND1-205ENST00000399050 H3BPC8 53 aa5.9□□□□□ -1.47
CTNND1-205ENST00000399050 ACYP2P14621 99 aa5.89□□□□□ -1.47
CTNND1-205ENST00000399050 RPL37AP61513 92 aaKnown RBP5.89□□□□□ -1.47
CTNND1-205ENST00000399050 Q6ZRX8 168 aa5.89□□□□□ -1.47
CTNND1-205ENST00000399050 ST20-AS1Q8NBB2 130 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 139.5 ms