RNA–Protein interactions for RNA: ENST00000398975.6

COL13A1-204, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 5

Gene COL13A1, Length 1,057 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-204ENST00000398975 KRTAP29-1A8MX34 341 aaPredicted RBP9.01□□□□□ -0.97
COL13A1-204ENST00000398975 TLX1NBP0CAT3 122 aa9.01□□□□□ -0.97
COL13A1-204ENST00000398975 PMVKQ15126 192 aa9.01□□□□□ -0.97
COL13A1-204ENST00000398975 C9orf116Q5BN46 136 aaPredicted RBP9.01□□□□□ -0.97
COL13A1-204ENST00000398975 PDZD11Q5EBL8 140 aa9.01□□□□□ -0.97
COL13A1-204ENST00000398975 GEMIN7Q9H840 131 aaKnown RBP9.01□□□□□ -0.97
COL13A1-204ENST00000398975 FAM168BA1KXE4 195 aa9□□□□□ -0.97
COL13A1-204ENST00000398975 LINC01549A6NIU2 74 aa9□□□□□ -0.97
COL13A1-204ENST00000398975 SMIM1B2RUZ4 78 aa9□□□□□ -0.97
COL13A1-204ENST00000398975 SEC11AP67812 179 aa9□□□□□ -0.97
COL13A1-204ENST00000398975 PRR3P79522 188 aaKnown RBP9□□□□□ -0.97
COL13A1-204ENST00000398975 KRTAP7-1Q8IUC3 87 aa9□□□□□ -0.97
COL13A1-204ENST00000398975 LINC00469Q8N7U9 141 aa9□□□□□ -0.97
COL13A1-204ENST00000398975 C7orf33Q8WU49 177 aa9□□□□□ -0.97
COL13A1-204ENST00000398975 TOMM7Q9P0U1 55 aa9□□□□□ -0.97
COL13A1-204ENST00000398975 HBDP02042 147 aa8.99□□□□□ -0.97
COL13A1-204ENST00000398975 Q8IZM0 81 aa8.99□□□□□ -0.97
COL13A1-204ENST00000398975 TRBV30A0A0K0K1B3 111 aa8.98□□□□□ -0.97
COL13A1-204ENST00000398975 SPINK8P0C7L1 97 aa8.97□□□□□ -0.97
COL13A1-204ENST00000398975 GAGE2EQ4V326 116 aa8.97□□□□□ -0.97
COL13A1-204ENST00000398975 GAGE2DQ9UEU5 116 aa8.97□□□□□ -0.97
COL13A1-204ENST00000398975 TRGC2P03986 189 aa8.96□□□□□ -0.98
COL13A1-204ENST00000398975 PRSS2P07478 247 aa8.96□□□□□ -0.98
COL13A1-204ENST00000398975 IGLC3P0DOY3 106 aa8.96□□□□□ -0.98
COL13A1-204ENST00000398975 C6orf226Q5I0X4 101 aa8.96□□□□□ -0.98
COL13A1-204ENST00000398975 C9orf129Q5T035 196 aaKnown RBP8.96□□□□□ -0.98
COL13A1-204ENST00000398975 PHF5AQ7RTV0 110 aaKnown RBP8.96□□□□□ -0.98
COL13A1-204ENST00000398975 KRTAP11-1Q8IUC1 163 aa8.96□□□□□ -0.98
COL13A1-204ENST00000398975 PACRGQ96M98 296 aaPredicted RBP8.96□□□□□ -0.98
COL13A1-204ENST00000398975 COLCA2A8K830 154 aa8.95□□□□□ -0.98
COL13A1-204ENST00000398975 NDUFC2-KCTD14E9PQ53 114 aa8.95□□□□□ -0.98
COL13A1-204ENST00000398975 LINC00310P59036 64 aa8.95□□□□□ -0.98
COL13A1-204ENST00000398975 RAB5BP61020 215 aa8.95□□□□□ -0.98
COL13A1-204ENST00000398975 CKS1BP61024 79 aa8.95□□□□□ -0.98
COL13A1-204ENST00000398975 ZNF22P17026 224 aaPredicted RBP8.94□□□□□ -0.98
COL13A1-204ENST00000398975 NDUFA6P56556 154 aa8.94□□□□□ -0.98
COL13A1-204ENST00000398975 COX7B2Q8TF08 81 aa8.94□□□□□ -0.98
COL13A1-204ENST00000398975 C11orf86A6NJI1 115 aa8.93□□□□□ -0.98
COL13A1-204ENST00000398975 ATP5LO75964 103 aa8.93□□□□□ -0.98
COL13A1-204ENST00000398975 OXTP01178 125 aa8.93□□□□□ -0.98
COL13A1-204ENST00000398975 FAM19A5Q7Z5A7 132 aaPredicted RBP8.93□□□□□ -0.98
COL13A1-204ENST00000398975 CHCHD1Q96BP2 118 aaKnown RBP8.93□□□□□ -0.98
COL13A1-204ENST00000398975 IGLV5-39A0A0G2JS06 123 aa8.92□□□□□ -0.98
COL13A1-204ENST00000398975 F8VRH5 84 aa8.92□□□□□ -0.98
COL13A1-204ENST00000398975 SCO1O75880 301 aa8.92□□□□□ -0.98
COL13A1-204ENST00000398975 MT1HL1P0DM35 61 aa8.92□□□□□ -0.98
COL13A1-204ENST00000398975 BAGE3Q86Y29 109 aa8.92□□□□□ -0.98
COL13A1-204ENST00000398975 FAM19A2Q8N3H0 131 aa8.92□□□□□ -0.98
COL13A1-204ENST00000398975 PSORS1C2Q9UIG4 136 aa8.92□□□□□ -0.98
COL13A1-204ENST00000398975 SRSF9Q13242 221 aaKnown RBP eCLIP8.91□□□□□ -0.98
COL13A1-204ENST00000398975 NUPR1O60356 82 aa8.9□□□□□ -0.98
COL13A1-204ENST00000398975 SERTAD4-AS1Q5TG53 156 aa8.9□□□□□ -0.98
COL13A1-204ENST00000398975 XAGE1AQ9HD64 81 aa8.9□□□□□ -0.98
COL13A1-204ENST00000398975 SERF1AO75920 110 aa8.89□□□□□ -0.99
COL13A1-204ENST00000398975 CXCL5P42830 114 aa8.89□□□□□ -0.99
COL13A1-204ENST00000398975 IFI27L1Q96BM0 104 aa8.89□□□□□ -0.99
COL13A1-204ENST00000398975 H3BRM9 83 aa8.88□□□□□ -0.99
COL13A1-204ENST00000398975 CHTOPQ9Y3Y2 248 aaKnown RBP8.88□□□□□ -0.99
COL13A1-204ENST00000398975 M0QXV9 152 aa8.87□□□□□ -0.99
COL13A1-204ENST00000398975 HSBP1O75506 76 aa8.87□□□□□ -0.99
COL13A1-204ENST00000398975 TRAV12-1A0A0B4J245 112 aa8.86□□□□□ -0.99
COL13A1-204ENST00000398975 TMEM170BQ5T4T1 132 aa8.85□□□□□ -0.99
COL13A1-204ENST00000398975 SPINK6Q6UWN8 80 aa8.85□□□□□ -0.99
COL13A1-204ENST00000398975 C1orf137Q5JT78 98 aa8.84□□□□□ -0.99
COL13A1-204ENST00000398975 TMEM223A0PJW6 202 aa8.83□□□□□ -1
COL13A1-204ENST00000398975 C22orf24Q9Y442 160 aa8.83□□□□□ -1
COL13A1-204ENST00000398975 TNXBP22105 4242 aa8.83□□□□□ -1
COL13A1-204ENST00000398975 IGLV7-43P04211 117 aa8.82□□□□□ -1
COL13A1-204ENST00000398975 ODF1Q14990 250 aa8.82□□□□□ -1
COL13A1-204ENST00000398975 ZNF625Q96I27 306 aaPredicted RBP8.82□□□□□ -1
COL13A1-204ENST00000398975 PFN2P35080 140 aa8.81□□□□□ -1
COL13A1-204ENST00000398975 LINC01600Q96MT4 127 aa8.81□□□□□ -1
COL13A1-204ENST00000398975 H0Y8G0 127 aa8.8□□□□□ -1
COL13A1-204ENST00000398975 HIST1H2BKO60814 126 aa8.8□□□□□ -1
COL13A1-204ENST00000398975 LEPROTL1O95214 131 aa8.8□□□□□ -1
COL13A1-204ENST00000398975 HIST1H2BJP06899 126 aa8.8□□□□□ -1
COL13A1-204ENST00000398975 FABP4P15090 132 aa8.8□□□□□ -1
COL13A1-204ENST00000398975 HIST1H2BOP23527 126 aa8.8□□□□□ -1
COL13A1-204ENST00000398975 HIST1H2BBP33778 126 aa8.8□□□□□ -1
COL13A1-204ENST00000398975 HIST1H2BDP58876 126 aa8.8□□□□□ -1
COL13A1-204ENST00000398975 HIST1H2BCP62807 126 aa8.8□□□□□ -1
COL13A1-204ENST00000398975 HIST2H2BEQ16778 126 aa8.8□□□□□ -1
COL13A1-204ENST00000398975 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.8□□□□□ -1
COL13A1-204ENST00000398975 HIST1H2BHQ93079 126 aa8.8□□□□□ -1
COL13A1-204ENST00000398975 HIST1H2BNQ99877 126 aa8.8□□□□□ -1
COL13A1-204ENST00000398975 HIST1H2BMQ99879 126 aa8.8□□□□□ -1
COL13A1-204ENST00000398975 ERG28Q9UKR5 140 aa8.8□□□□□ -1
COL13A1-204ENST00000398975 UBE2BP63146 152 aa8.79□□□□□ -1
COL13A1-204ENST00000398975 Q8NDZ9 215 aa8.79□□□□□ -1
COL13A1-204ENST00000398975 PLA2G2DQ9UNK4 145 aa8.79□□□□□ -1
COL13A1-204ENST00000398975 SND1-IT1Q9HBX3 110 aa8.78□□□□□ -1
COL13A1-204ENST00000398975 TP73-AS1Q9UF72 201 aa8.78□□□□□ -1
COL13A1-204ENST00000398975 IGLV5-37A0A075B6J1 123 aa8.77□□□□□ -1.01
COL13A1-204ENST00000398975 KRTAP10-8P60410 259 aa8.77□□□□□ -1.01
COL13A1-204ENST00000398975 MRPL55Q7Z7F7 128 aaKnown RBP8.77□□□□□ -1.01
COL13A1-204ENST00000398975 LINC00167Q96N53 147 aa8.77□□□□□ -1.01
COL13A1-204ENST00000398975 PMCHL2Q9BQD1 86 aa8.77□□□□□ -1.01
COL13A1-204ENST00000398975 TSPEAR-AS2P59090 65 aa8.76□□□□□ -1.01
COL13A1-204ENST00000398975 REG3GQ6UW15 175 aa8.76□□□□□ -1.01
COL13A1-204ENST00000398975 HMCN2Q8NDA2 5059 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms