RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 FHL2Q14192 279 aa10.16□□□□□ -0.78
PCDHA11-201ENST00000398640 FAM240AA0A1B0GVK7 77 aa10.15□□□□□ -0.78
PCDHA11-201ENST00000398640 FHL3Q13643 280 aa10.15□□□□□ -0.78
PCDHA11-201ENST00000398640 MUC7Q8TAX7 377 aa10.15□□□□□ -0.78
PCDHA11-201ENST00000398640 ANKRD11Q6UB99 2663 aaPredicted RBP10.15□□□□□ -0.78
PCDHA11-201ENST00000398640 A6NED7 52 aa10.15□□□□□ -0.79
PCDHA11-201ENST00000398640 HCFC1P51610 2035 aa10.15□□□□□ -0.79
PCDHA11-201ENST00000398640 IGIPA6NJ69 53 aa10.14□□□□□ -0.79
PCDHA11-201ENST00000398640 CHCHD7Q9BUK0 85 aa10.14□□□□□ -0.79
PCDHA11-201ENST00000398640 ZNF462Q96JM2 2506 aa10.14□□□□□ -0.79
PCDHA11-201ENST00000398640 EGFEM1PQ0D2K5 195 aa10.14□□□□□ -0.79
PCDHA11-201ENST00000398640 MDFIQ99750 246 aa10.14□□□□□ -0.79
PCDHA11-201ENST00000398640 SMIM1B2RUZ4 78 aa10.13□□□□□ -0.79
PCDHA11-201ENST00000398640 MRPL55Q7Z7F7 128 aaKnown RBP10.12□□□□□ -0.79
PCDHA11-201ENST00000398640 LYPD5Q6UWN5 251 aa10.12□□□□□ -0.79
PCDHA11-201ENST00000398640 Q6ZSN1 163 aa10.11□□□□□ -0.79
PCDHA11-201ENST00000398640 SERP2Q8N6R1 65 aa10.11□□□□□ -0.79
PCDHA11-201ENST00000398640 NTM-AS1Q6ZSK4 140 aa10.11□□□□□ -0.79
PCDHA11-201ENST00000398640 XGP55808 180 aa10.11□□□□□ -0.79
PCDHA11-201ENST00000398640 A0A087WYN8 130 aa10.11□□□□□ -0.79
PCDHA11-201ENST00000398640 DEFB116Q30KQ4 102 aa10.1□□□□□ -0.79
PCDHA11-201ENST00000398640 PCSK5Q92824 1860 aa10.1□□□□□ -0.79
PCDHA11-201ENST00000398640 Q8N814 137 aa10.1□□□□□ -0.79
PCDHA11-201ENST00000398640 ABCA2Q9BZC7 2435 aa10.1□□□□□ -0.79
PCDHA11-201ENST00000398640 Q9BRP9 147 aa10.1□□□□□ -0.79
PCDHA11-201ENST00000398640 CEP295Q9C0D2 2601 aa10.09□□□□□ -0.79
PCDHA11-201ENST00000398640 TET2Q6N021 2002 aaPredicted RBP10.09□□□□□ -0.79
PCDHA11-201ENST00000398640 TSPEAR-AS2P59090 65 aa10.09□□□□□ -0.79
PCDHA11-201ENST00000398640 CCDC179H3BU77 68 aa10.08□□□□□ -0.8
PCDHA11-201ENST00000398640 LINC00337Q8N6G1 96 aa10.08□□□□□ -0.8
PCDHA11-201ENST00000398640 V9GYY9 64 aa10.08□□□□□ -0.8
PCDHA11-201ENST00000398640 SPATA3Q8NHX4 192 aa10.08□□□□□ -0.8
PCDHA11-201ENST00000398640 IMUPQ9GZP8 106 aa10.08□□□□□ -0.8
PCDHA11-201ENST00000398640 SPINK1P00995 79 aa10.08□□□□□ -0.8
PCDHA11-201ENST00000398640 LINC00208Q96KT6 92 aa10.07□□□□□ -0.8
PCDHA11-201ENST00000398640 NDUFC1O43677 76 aa10.07□□□□□ -0.8
PCDHA11-201ENST00000398640 URB1-AS1Q96HZ7 61 aa10.07□□□□□ -0.8
PCDHA11-201ENST00000398640 BEAN1Q3B7T3 259 aa10.07□□□□□ -0.8
PCDHA11-201ENST00000398640 C2orf48Q96LS8 159 aa10.06□□□□□ -0.8
PCDHA11-201ENST00000398640 MYO18BQ8IUG5 2567 aa10.06□□□□□ -0.8
PCDHA11-201ENST00000398640 LINC01547P58512 204 aaPredicted RBP10.05□□□□□ -0.8
PCDHA11-201ENST00000398640 PCOTHQ58A44 107 aa10.05□□□□□ -0.8
PCDHA11-201ENST00000398640 Q6Q795 121 aa10.05□□□□□ -0.8
PCDHA11-201ENST00000398640 ADAMTSL4-AS1Q5T5F5 129 aa10.05□□□□□ -0.8
PCDHA11-201ENST00000398640 CHD8Q9HCK8 2581 aa10.04□□□□□ -0.8
PCDHA11-201ENST00000398640 A8MTW9 85 aa10.04□□□□□ -0.8
PCDHA11-201ENST00000398640 ATP5EP56381 51 aaPredicted RBP10.04□□□□□ -0.8
PCDHA11-201ENST00000398640 PRYO14603 147 aa10.04□□□□□ -0.8
PCDHA11-201ENST00000398640 PRLHP81277 87 aa10.04□□□□□ -0.8
PCDHA11-201ENST00000398640 WWC2-AS2Q96NR7 200 aa10.04□□□□□ -0.8
PCDHA11-201ENST00000398640 SBSPONQ8IVN8 264 aa10.03□□□□□ -0.8
PCDHA11-201ENST00000398640 A0A087WSZ3 146 aa10.02□□□□□ -0.8
PCDHA11-201ENST00000398640 A0A087WVE0 104 aa10.02□□□□□ -0.8
PCDHA11-201ENST00000398640 LINC00310P59036 64 aa10.02□□□□□ -0.8
PCDHA11-201ENST00000398640 Q6JHZ5 121 aa10.02□□□□□ -0.8
PCDHA11-201ENST00000398640 TRBV7-6A0A0J9YX20 115 aa10.02□□□□□ -0.81
PCDHA11-201ENST00000398640 Q6ZRU5 148 aa10.01□□□□□ -0.81
PCDHA11-201ENST00000398640 COX7CP15954 63 aa10.01□□□□□ -0.81
PCDHA11-201ENST00000398640 LINC00575Q6W349 94 aa10.01□□□□□ -0.81
PCDHA11-201ENST00000398640 COX8CQ7Z4L0 72 aa10.01□□□□□ -0.81
PCDHA11-201ENST00000398640 FAM229AH3BQW9 127 aa10□□□□□ -0.81
PCDHA11-201ENST00000398640 C16orf90A8MZG2 172 aa9.98□□□□□ -0.81
PCDHA11-201ENST00000398640 CSDC2Q9Y534 153 aaKnown RBP9.98□□□□□ -0.81
PCDHA11-201ENST00000398640 C2CD3Q4AC94 2353 aa9.98□□□□□ -0.81
PCDHA11-201ENST00000398640 AMELXQ99217 191 aa9.98□□□□□ -0.81
PCDHA11-201ENST00000398640 SOSTDC1Q6X4U4 206 aa9.97□□□□□ -0.81
PCDHA11-201ENST00000398640 PKD1L2Q7Z442 2459 aa9.97□□□□□ -0.81
PCDHA11-201ENST00000398640 SPACA4Q8TDM5 124 aa9.96□□□□□ -0.81
PCDHA11-201ENST00000398640 LIMD2Q9BT23 127 aa9.96□□□□□ -0.81
PCDHA11-201ENST00000398640 COL27A1Q8IZC6 1860 aaPredicted RBP9.95□□□□□ -0.82
PCDHA11-201ENST00000398640 LRRK2Q5S007 2527 aa9.95□□□□□ -0.82
PCDHA11-201ENST00000398640 A0A1B0GUV1 79 aa9.95□□□□□ -0.82
PCDHA11-201ENST00000398640 C22orf24Q9Y442 160 aa9.94□□□□□ -0.82
PCDHA11-201ENST00000398640 J3QL48 77 aa9.94□□□□□ -0.82
PCDHA11-201ENST00000398640 A0A096LNT2 108 aa9.94□□□□□ -0.82
PCDHA11-201ENST00000398640 TRAV7A0A075B6U4 112 aa9.93□□□□□ -0.82
PCDHA11-201ENST00000398640 H0Y9P7 68 aa9.93□□□□□ -0.82
PCDHA11-201ENST00000398640 SMCR5Q8TEV8 140 aa9.93□□□□□ -0.82
PCDHA11-201ENST00000398640 UTRNP46939 3433 aa9.93□□□□□ -0.82
PCDHA11-201ENST00000398640 F8WDY8 70 aa9.93□□□□□ -0.82
PCDHA11-201ENST00000398640 Q8N3U1 123 aa9.93□□□□□ -0.82
PCDHA11-201ENST00000398640 HCG22E2RYF7 251 aa9.92□□□□□ -0.82
PCDHA11-201ENST00000398640 JMJD1CQ15652 2540 aa9.92□□□□□ -0.82
PCDHA11-201ENST00000398640 DOPEY1Q5JWR5 2465 aa9.91□□□□□ -0.82
PCDHA11-201ENST00000398640 WDR87Q6ZQQ6 2873 aa9.91□□□□□ -0.82
PCDHA11-201ENST00000398640 FASNP49327 2511 aaKnown RBP9.91□□□□□ -0.82
PCDHA11-201ENST00000398640 AGRNO00468 2067 aa9.9□□□□□ -0.82
PCDHA11-201ENST00000398640 IGKV2D-30A0A075B6S6 120 aa9.9□□□□□ -0.83
PCDHA11-201ENST00000398640 IGKV2-30P06310 120 aa9.9□□□□□ -0.83
PCDHA11-201ENST00000398640 RTL8CO15255 209 aa9.89□□□□□ -0.83
PCDHA11-201ENST00000398640 CHTF8P0CG12 524 aa9.89□□□□□ -0.83
PCDHA11-201ENST00000398640 A0A096LNJ9 63 aa9.89□□□□□ -0.83
PCDHA11-201ENST00000398640 LINC00315P59091 139 aa9.89□□□□□ -0.83
PCDHA11-201ENST00000398640 KRTAP1-3Q8IUG1 177 aa9.89□□□□□ -0.83
PCDHA11-201ENST00000398640 CENPFP49454 3210 aa9.88□□□□□ -0.83
PCDHA11-201ENST00000398640 ZFYVE26Q68DK2 2539 aa9.88□□□□□ -0.83
PCDHA11-201ENST00000398640 MYO9AB2RTY4 2548 aa9.88□□□□□ -0.83
PCDHA11-201ENST00000398640 MOBPQ13875 183 aa9.88□□□□□ -0.83
PCDHA11-201ENST00000398640 TRBV7-7A0A0K0K1E9 115 aa9.87□□□□□ -0.83
PCDHA11-201ENST00000398640 LINC01561Q8N1V8 128 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms