RNA–Protein interactions for RNA: ENST00000398587.6

PCDHGA11-201, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA11, Length 4,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-201ENST00000398587 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.06□□□□□ -0.8
PCDHGA11-201ENST00000398587 C9orf116Q5BN46 136 aaPredicted RBP10.06□□□□□ -0.8
PCDHGA11-201ENST00000398587 IMUPQ9GZP8 106 aa10.05□□□□□ -0.8
PCDHGA11-201ENST00000398587 A0A096LNI7 61 aa10.05□□□□□ -0.8
PCDHGA11-201ENST00000398587 H0Y9J4 135 aa10.05□□□□□ -0.8
PCDHGA11-201ENST00000398587 ENHOQ6UWT2 76 aa10.04□□□□□ -0.8
PCDHGA11-201ENST00000398587 LINC01561Q8N1V8 128 aa10.04□□□□□ -0.8
PCDHGA11-201ENST00000398587 UQCRQO14949 82 aa10.04□□□□□ -0.8
PCDHGA11-201ENST00000398587 SCXQ7RTU7 201 aa10.02□□□□□ -0.8
PCDHGA11-201ENST00000398587 TRANK1O15050 2925 aa10.02□□□□□ -0.8
PCDHGA11-201ENST00000398587 HECTD1Q9ULT8 2610 aa10.02□□□□□ -0.81
PCDHGA11-201ENST00000398587 LYPD5Q6UWN5 251 aa10.02□□□□□ -0.81
PCDHGA11-201ENST00000398587 XGP55808 180 aa10.02□□□□□ -0.81
PCDHGA11-201ENST00000398587 FAM240AA0A1B0GVK7 77 aa10.02□□□□□ -0.81
PCDHGA11-201ENST00000398587 IGLV5-39A0A0G2JS06 123 aa10.01□□□□□ -0.81
PCDHGA11-201ENST00000398587 NTM-AS1Q6ZSK4 140 aa10.01□□□□□ -0.81
PCDHGA11-201ENST00000398587 TRBV10-3A0A0K0K1G6 114 aa10□□□□□ -0.81
PCDHGA11-201ENST00000398587 RPL37AP8A6NKH3 93 aa10□□□□□ -0.81
PCDHGA11-201ENST00000398587 NDUFC2O95298 119 aa10□□□□□ -0.81
PCDHGA11-201ENST00000398587 C20orf197Q8N268 126 aa10□□□□□ -0.81
PCDHGA11-201ENST00000398587 J3KT08 172 aa9.99□□□□□ -0.81
PCDHGA11-201ENST00000398587 M0R2N4 97 aa9.99□□□□□ -0.81
PCDHGA11-201ENST00000398587 PRR3P79522 188 aaKnown RBP9.99□□□□□ -0.81
PCDHGA11-201ENST00000398587 IGHV3OR16-9A0A0B4J2B5 98 aa9.99□□□□□ -0.81
PCDHGA11-201ENST00000398587 WFDC10BQ8IUB3 73 aa9.99□□□□□ -0.81
PCDHGA11-201ENST00000398587 Q8N814 137 aa9.99□□□□□ -0.81
PCDHGA11-201ENST00000398587 C3orf84H3BNL1 204 aa9.98□□□□□ -0.81
PCDHGA11-201ENST00000398587 F8WDY8 70 aa9.98□□□□□ -0.81
PCDHGA11-201ENST00000398587 WFDC9Q8NEX5 89 aa9.97□□□□□ -0.81
PCDHGA11-201ENST00000398587 C2orf48Q96LS8 159 aa9.97□□□□□ -0.81
PCDHGA11-201ENST00000398587 NDUFC2-KCTD14E9PQ53 114 aa9.97□□□□□ -0.81
PCDHGA11-201ENST00000398587 LINC00474Q9P2X8 69 aa9.97□□□□□ -0.81
PCDHGA11-201ENST00000398587 USP17L23D6RBM5 183 aa9.97□□□□□ -0.81
PCDHGA11-201ENST00000398587 NUPR2A6NF83 97 aa9.97□□□□□ -0.81
PCDHGA11-201ENST00000398587 C6orf223Q8N319 242 aa9.96□□□□□ -0.82
PCDHGA11-201ENST00000398587 C7orf33Q8WU49 177 aa9.95□□□□□ -0.82
PCDHGA11-201ENST00000398587 Q9UF83 564 aa9.95□□□□□ -0.82
PCDHGA11-201ENST00000398587 CELA1Q9UNI1 258 aa9.95□□□□□ -0.82
PCDHGA11-201ENST00000398587 IGLV5-45A0A087WSX0 123 aa9.95□□□□□ -0.82
PCDHGA11-201ENST00000398587 A0A087WYN8 130 aa9.95□□□□□ -0.82
PCDHGA11-201ENST00000398587 C3orf22Q8N5N4 141 aa9.95□□□□□ -0.82
PCDHGA11-201ENST00000398587 PPDPFQ9H3Y8 114 aa9.94□□□□□ -0.82
PCDHGA11-201ENST00000398587 Q6JHZ5 121 aa9.94□□□□□ -0.82
PCDHGA11-201ENST00000398587 X6R8D5 127 aa9.93□□□□□ -0.82
PCDHGA11-201ENST00000398587 LINC00337Q8N6G1 96 aa9.93□□□□□ -0.82
PCDHGA11-201ENST00000398587 SERP2Q8N6R1 65 aa9.93□□□□□ -0.82
PCDHGA11-201ENST00000398587 ZNF706Q9Y5V0 76 aaPredicted RBP9.93□□□□□ -0.82
PCDHGA11-201ENST00000398587 Q6Q795 121 aa9.92□□□□□ -0.82
PCDHGA11-201ENST00000398587 M0QXV9 152 aa9.92□□□□□ -0.82
PCDHGA11-201ENST00000398587 PLAC8L1A1L4L8 177 aa9.91□□□□□ -0.82
PCDHGA11-201ENST00000398587 A0A096LNT2 108 aa9.91□□□□□ -0.82
PCDHGA11-201ENST00000398587 LRCOL1A6NCL2 159 aa9.91□□□□□ -0.82
PCDHGA11-201ENST00000398587 LY6G6CO95867 125 aa9.91□□□□□ -0.82
PCDHGA11-201ENST00000398587 CHKB-CPT1BH3BT56 60 aa9.89□□□□□ -0.83
PCDHGA11-201ENST00000398587 Q6ZRU5 148 aa9.89□□□□□ -0.83
PCDHGA11-201ENST00000398587 MKI67P46013 3256 aaKnown RBP9.89□□□□□ -0.83
PCDHGA11-201ENST00000398587 CENPEQ02224 2701 aa9.88□□□□□ -0.83
PCDHGA11-201ENST00000398587 LAMA3Q16787 3333 aa9.88□□□□□ -0.83
PCDHGA11-201ENST00000398587 A8MTW9 85 aa9.88□□□□□ -0.83
PCDHGA11-201ENST00000398587 IGKV4-1P06312 121 aa9.87□□□□□ -0.83
PCDHGA11-201ENST00000398587 USP24Q9UPU5 2620 aa9.87□□□□□ -0.83
PCDHGA11-201ENST00000398587 LINC01556Q5JQF7 62 aa9.87□□□□□ -0.83
PCDHGA11-201ENST00000398587 REG3GQ6UW15 175 aa9.87□□□□□ -0.83
PCDHGA11-201ENST00000398587 BPTFQ12830 3046 aa9.86□□□□□ -0.83
PCDHGA11-201ENST00000398587 COX7CP15954 63 aa9.86□□□□□ -0.83
PCDHGA11-201ENST00000398587 LINC00575Q6W349 94 aa9.86□□□□□ -0.83
PCDHGA11-201ENST00000398587 FAM19A3Q7Z5A8 133 aa9.86□□□□□ -0.83
PCDHGA11-201ENST00000398587 H3BNG1 76 aa9.86□□□□□ -0.83
PCDHGA11-201ENST00000398587 FAM236DA0A1B0GTK5 79 aa9.86□□□□□ -0.83
PCDHGA11-201ENST00000398587 FAM236CP0DP71 79 aa9.86□□□□□ -0.83
PCDHGA11-201ENST00000398587 ZNF292O60281 2723 aa9.85□□□□□ -0.83
PCDHGA11-201ENST00000398587 C1orf137Q5JT78 98 aa9.85□□□□□ -0.83
PCDHGA11-201ENST00000398587 FLNAP21333 2647 aaKnown RBP9.84□□□□□ -0.83
PCDHGA11-201ENST00000398587 ESRGQ1W209 222 aa9.84□□□□□ -0.83
PCDHGA11-201ENST00000398587 KRTAP24-1Q3LI83 254 aa9.84□□□□□ -0.83
PCDHGA11-201ENST00000398587 C5orf47Q569G3 176 aa9.84□□□□□ -0.83
PCDHGA11-201ENST00000398587 PRYO14603 147 aa9.83□□□□□ -0.84
PCDHGA11-201ENST00000398587 MRPL55Q7Z7F7 128 aaKnown RBP9.83□□□□□ -0.84
PCDHGA11-201ENST00000398587 NDUFC1O43677 76 aa9.83□□□□□ -0.84
PCDHGA11-201ENST00000398587 WFDC13Q8IUB5 93 aa9.83□□□□□ -0.84
PCDHGA11-201ENST00000398587 NHLRC4P0CG21 123 aaPredicted RBP9.82□□□□□ -0.84
PCDHGA11-201ENST00000398587 Q8NAQ8 132 aa9.82□□□□□ -0.84
PCDHGA11-201ENST00000398587 MGAM2Q2M2H8 2515 aa9.81□□□□□ -0.84
PCDHGA11-201ENST00000398587 SOSTDC1Q6X4U4 206 aa9.81□□□□□ -0.84
PCDHGA11-201ENST00000398587 IGLV9-49A0A0B4J1Y8 123 aa9.81□□□□□ -0.84
PCDHGA11-201ENST00000398587 C10orf25Q5T742 122 aa9.81□□□□□ -0.84
PCDHGA11-201ENST00000398587 CCDC179H3BU77 68 aa9.8□□□□□ -0.84
PCDHGA11-201ENST00000398587 SPINK6Q6UWN8 80 aa9.8□□□□□ -0.84
PCDHGA11-201ENST00000398587 SBSPONQ8IVN8 264 aa9.8□□□□□ -0.84
PCDHGA11-201ENST00000398587 ITPR3Q14573 2671 aa9.79□□□□□ -0.84
PCDHGA11-201ENST00000398587 HELZ2Q9BYK8 2649 aaKnown RBP9.79□□□□□ -0.84
PCDHGA11-201ENST00000398587 A0A087WVE0 104 aa9.78□□□□□ -0.84
PCDHGA11-201ENST00000398587 C6orf48Q9UBA6 75 aa9.78□□□□□ -0.84
PCDHGA11-201ENST00000398587 SMCPP49901 116 aaPredicted RBP9.77□□□□□ -0.84
PCDHGA11-201ENST00000398587 HRCT1Q6UXD1 115 aa9.77□□□□□ -0.85
PCDHGA11-201ENST00000398587 PRO0461Q9UI25 63 aa9.77□□□□□ -0.85
PCDHGA11-201ENST00000398587 SNURFQ9Y675 71 aa9.77□□□□□ -0.85
PCDHGA11-201ENST00000398587 CSNK1G2-AS1Q8NCQ2 148 aa9.76□□□□□ -0.85
PCDHGA11-201ENST00000398587 LINC00846Q9NV44 126 aa9.76□□□□□ -0.85
PCDHGA11-201ENST00000398587 CFAP46Q8IYW2 2715 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms