RNA–Protein interactions for RNA: ENST00000398510.7

CHD9-202, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best) BASIC

Gene CHD9, Length 11,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-202ENST00000398510 LINC00308Q8TCZ7 52 aa2□□□□□ -2.09
CHD9-202ENST00000398510 CENPEQ02224 2701 aa2□□□□□ -2.09
CHD9-202ENST00000398510 FAM19A5Q7Z5A7 132 aaPredicted RBP2□□□□□ -2.09
CHD9-202ENST00000398510 ZFAND3Q9H8U3 227 aa1.99□□□□□ -2.09
CHD9-202ENST00000398510 USP24Q9UPU5 2620 aa1.99□□□□□ -2.09
CHD9-202ENST00000398510 SPAG11AQ6PDA7 123 aa1.99□□□□□ -2.09
CHD9-202ENST00000398510 C6orf223Q8N319 242 aa1.99□□□□□ -2.09
CHD9-202ENST00000398510 STAB2Q8WWQ8 2551 aa1.99□□□□□ -2.09
CHD9-202ENST00000398510 IGHV4-30-4P0DP06 118 aa1.99□□□□□ -2.09
CHD9-202ENST00000398510 RPL39LQ96EH5 51 aaKnown RBP1.99□□□□□ -2.09
CHD9-202ENST00000398510 COX8CQ7Z4L0 72 aa1.99□□□□□ -2.09
CHD9-202ENST00000398510 ZNF503-AS2A6NEH8 195 aa1.99□□□□□ -2.09
CHD9-202ENST00000398510 FRMD6-AS1P0C7T7 363 aa1.99□□□□□ -2.09
CHD9-202ENST00000398510 ATRAIDQ6UW56 229 aa1.99□□□□□ -2.09
CHD9-202ENST00000398510 FAM167A-AS1Q96KT0 104 aa1.99□□□□□ -2.09
CHD9-202ENST00000398510 WDFY4Q6ZS81 3184 aa1.99□□□□□ -2.09
CHD9-202ENST00000398510 WFDC10BQ8IUB3 73 aa1.99□□□□□ -2.09
CHD9-202ENST00000398510 IGKV1D-37A0A075B6S9 117 aa1.99□□□□□ -2.09
CHD9-202ENST00000398510 C16orf90A8MZG2 172 aa1.99□□□□□ -2.09
CHD9-202ENST00000398510 GRNP28799 593 aaKnown RBP1.99□□□□□ -2.09
CHD9-202ENST00000398510 Q6ZTI0 123 aa1.99□□□□□ -2.09
CHD9-202ENST00000398510 Q8NBF4 154 aa1.99□□□□□ -2.09
CHD9-202ENST00000398510 J3QL48 77 aa1.99□□□□□ -2.09
CHD9-202ENST00000398510 TRBV10-3A0A0K0K1G6 114 aa1.98□□□□□ -2.09
CHD9-202ENST00000398510 LRBAP50851 2863 aa1.98□□□□□ -2.09
CHD9-202ENST00000398510 DMXL1Q9Y485 3027 aa1.98□□□□□ -2.09
CHD9-202ENST00000398510 UNQ9165/PRO28630Q6UXU0 137 aa1.98□□□□□ -2.09
CHD9-202ENST00000398510 C9orf163Q8N9P6 203 aa1.98□□□□□ -2.09
CHD9-202ENST00000398510 IGLV4-3A0A075B6K6 122 aa1.98□□□□□ -2.09
CHD9-202ENST00000398510 TRAV22A0A0B4J277 110 aa1.98□□□□□ -2.09
CHD9-202ENST00000398510 RPL39P62891 51 aaKnown RBP1.98□□□□□ -2.09
CHD9-202ENST00000398510 ESRGQ1W209 222 aa1.98□□□□□ -2.09
CHD9-202ENST00000398510 ATP11AUNQ6ZP68 121 aa1.98□□□□□ -2.09
CHD9-202ENST00000398510 PRB3Q04118 309 aaPredicted RBP1.98□□□□□ -2.09
CHD9-202ENST00000398510 RNASE13Q5GAN3 156 aaKnown RBP1.98□□□□□ -2.09
CHD9-202ENST00000398510 IGKV2-28A0A075B6P5 120 aa1.98□□□□□ -2.09
CHD9-202ENST00000398510 IGKV2D-28P01615 120 aa1.98□□□□□ -2.09
CHD9-202ENST00000398510 A0A0J9YXV3 536 aa1.98□□□□□ -2.09
CHD9-202ENST00000398510 ARTNQ5T4W7 220 aa1.98□□□□□ -2.09
CHD9-202ENST00000398510 LAMA5O15230 3695 aa1.98□□□□□ -2.09
CHD9-202ENST00000398510 ZNF22P17026 224 aaPredicted RBP1.97□□□□□ -2.09
CHD9-202ENST00000398510 C1orf137Q5JT78 98 aa1.97□□□□□ -2.09
CHD9-202ENST00000398510 HCG22E2RYF7 251 aa1.97□□□□□ -2.09
CHD9-202ENST00000398510 TFF1P04155 84 aa1.97□□□□□ -2.09
CHD9-202ENST00000398510 NDUFV3P56181 108 aaKnown RBP1.97□□□□□ -2.09
CHD9-202ENST00000398510 CIRBP-AS1Q8TBR5 109 aa1.97□□□□□ -2.09
CHD9-202ENST00000398510 TP53TG3Q9ULZ0 132 aa1.97□□□□□ -2.09
CHD9-202ENST00000398510 KIF25-AS1Q9Y6Z4 181 aa1.97□□□□□ -2.09
CHD9-202ENST00000398510 A6NED7 52 aa1.97□□□□□ -2.09
CHD9-202ENST00000398510 Q6Q795 121 aa1.97□□□□□ -2.09
CHD9-202ENST00000398510 BEAN1Q3B7T3 259 aa1.97□□□□□ -2.09
CHD9-202ENST00000398510 CEMP1Q6PRD7 247 aaPredicted RBP1.97□□□□□ -2.09
CHD9-202ENST00000398510 LINC00575Q6W349 94 aa1.97□□□□□ -2.09
CHD9-202ENST00000398510 ACYP2P14621 99 aa1.97□□□□□ -2.09
CHD9-202ENST00000398510 IGFL4Q6B9Z1 124 aa1.97□□□□□ -2.09
CHD9-202ENST00000398510 YPEL4Q96NS1 127 aa1.97□□□□□ -2.09
CHD9-202ENST00000398510 AKAP9Q99996 3911 aa1.97□□□□□ -2.09
CHD9-202ENST00000398510 C8orf87E5RJ46 101 aa1.97□□□□□ -2.09
CHD9-202ENST00000398510 IGLV2-14P01704 120 aa1.97□□□□□ -2.09
CHD9-202ENST00000398510 C6orf99Q4VX62 202 aa1.97□□□□□ -2.09
CHD9-202ENST00000398510 CELA1Q9UNI1 258 aa1.96□□□□□ -2.09
CHD9-202ENST00000398510 FREM2Q5SZK8 3169 aa1.96□□□□□ -2.1
CHD9-202ENST00000398510 CRYGAP11844 174 aa1.96□□□□□ -2.1
CHD9-202ENST00000398510 NANOS2P60321 138 aaKnown RBP1.96□□□□□ -2.1
CHD9-202ENST00000398510 ASPMQ8IZT6 3477 aa1.96□□□□□ -2.1
CHD9-202ENST00000398510 LOC101927531A0A1B0GV80 90 aa1.96□□□□□ -2.1
CHD9-202ENST00000398510 MDFIQ99750 246 aa1.96□□□□□ -2.1
CHD9-202ENST00000398510 PLA2G2EQ9NZK7 142 aa1.96□□□□□ -2.1
CHD9-202ENST00000398510 GVQW2A0A096LPI5 108 aaPredicted RBP1.96□□□□□ -2.1
CHD9-202ENST00000398510 LINC00959A0A1B0GUT2 108 aa1.96□□□□□ -2.1
CHD9-202ENST00000398510 CYSRT1A8MQ03 144 aa1.96□□□□□ -2.1
CHD9-202ENST00000398510 ADCYAP1P18509 176 aa1.96□□□□□ -2.1
CHD9-202ENST00000398510 RSPO1Q2MKA7 263 aaPredicted RBP1.96□□□□□ -2.1
CHD9-202ENST00000398510 C7orf65Q6ZTY9 151 aa1.96□□□□□ -2.1
CHD9-202ENST00000398510 Q8N814 137 aa1.96□□□□□ -2.1
CHD9-202ENST00000398510 NRGNQ92686 78 aa1.96□□□□□ -2.1
CHD9-202ENST00000398510 C20orf173Q96LM9 149 aa1.96□□□□□ -2.1
CHD9-202ENST00000398510 Q9BRP9 147 aa1.96□□□□□ -2.1
CHD9-202ENST00000398510 SBSPONQ8IVN8 264 aa1.96□□□□□ -2.1
CHD9-202ENST00000398510 CFAP46Q8IYW2 2715 aa1.96□□□□□ -2.1
CHD9-202ENST00000398510 IGLV2-33A0A075B6J2 118 aaPredicted RBP1.96□□□□□ -2.1
CHD9-202ENST00000398510 ITPR2Q14571 2701 aa1.96□□□□□ -2.1
CHD9-202ENST00000398510 WFDC10AQ9H1F0 79 aa1.96□□□□□ -2.1
CHD9-202ENST00000398510 CDKN2A-AS1Q9UH64 79 aa1.95□□□□□ -2.1
CHD9-202ENST00000398510 NTM-AS1Q6ZSK4 140 aa1.95□□□□□ -2.1
CHD9-202ENST00000398510 RBM12B-AS1Q9P1G2 102 aa1.95□□□□□ -2.1
CHD9-202ENST00000398510 IGLV9-49A0A0B4J1Y8 123 aa1.95□□□□□ -2.1
CHD9-202ENST00000398510 LOC100131303A0A0U1RQF7 123 aa1.95□□□□□ -2.1
CHD9-202ENST00000398510 KALRNO60229 2985 aa1.95□□□□□ -2.1
CHD9-202ENST00000398510 DNAH10OSP0CZ25 163 aa1.95□□□□□ -2.1
CHD9-202ENST00000398510 VPREB1P12018 145 aa1.95□□□□□ -2.1
CHD9-202ENST00000398510 Q6ZQY7 126 aa1.95□□□□□ -2.1
CHD9-202ENST00000398510 STAB1Q9NY15 2570 aa1.95□□□□□ -2.1
CHD9-202ENST00000398510 A8MZ25 164 aa1.95□□□□□ -2.1
CHD9-202ENST00000398510 SPINK1P00995 79 aa1.95□□□□□ -2.1
CHD9-202ENST00000398510 Q6ZRX8 168 aa1.95□□□□□ -2.1
CHD9-202ENST00000398510 CELSR3Q9NYQ7 3312 aa1.95□□□□□ -2.1
CHD9-202ENST00000398510 A8MUN3 132 aa1.95□□□□□ -2.1
CHD9-202ENST00000398510 RETNQ9HD89 108 aa1.95□□□□□ -2.1
CHD9-202ENST00000398510 NBDYA0A0U1RRE5 68 aa1.95□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms