RNA–Protein interactions for RNA: ENST00000397906.6

TTC28-201, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TTC28, Length 11,795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-201ENST00000397906 XGP55808 180 aa8.06□□□□□ -1.12
TTC28-201ENST00000397906 ATP5EP2Q5VTU8 51 aa8.06□□□□□ -1.12
TTC28-201ENST00000397906 PRLHP81277 87 aa8.06□□□□□ -1.12
TTC28-201ENST00000397906 IGIPA6NJ69 53 aa8.06□□□□□ -1.12
TTC28-201ENST00000397906 FAM19A3Q7Z5A8 133 aa8.06□□□□□ -1.12
TTC28-201ENST00000397906 ZNF580Q9UK33 172 aa8.05□□□□□ -1.12
TTC28-201ENST00000397906 NDUFC2-KCTD14E9PQ53 114 aa8.05□□□□□ -1.12
TTC28-201ENST00000397906 A8MTW9 85 aa8.04□□□□□ -1.12
TTC28-201ENST00000397906 UTRNP46939 3433 aa8.04□□□□□ -1.12
TTC28-201ENST00000397906 KRTAP24-1Q3LI83 254 aa8.04□□□□□ -1.12
TTC28-201ENST00000397906 A0A087WYN8 130 aa8.04□□□□□ -1.12
TTC28-201ENST00000397906 SPINK1P00995 79 aa8.03□□□□□ -1.12
TTC28-201ENST00000397906 Q6ZRU5 148 aa8.03□□□□□ -1.12
TTC28-201ENST00000397906 CNFNQ9BYD5 112 aa8.03□□□□□ -1.12
TTC28-201ENST00000397906 SBSPONQ8IVN8 264 aa8.03□□□□□ -1.12
TTC28-201ENST00000397906 C2orf48Q96LS8 159 aa8.02□□□□□ -1.12
TTC28-201ENST00000397906 C2orf91Q6ZV80 131 aa8.02□□□□□ -1.12
TTC28-201ENST00000397906 Q8N814 137 aa8.02□□□□□ -1.13
TTC28-201ENST00000397906 COL4A2P08572 1712 aa8.02□□□□□ -1.13
TTC28-201ENST00000397906 CENPFP49454 3210 aa8.02□□□□□ -1.13
TTC28-201ENST00000397906 NTM-AS1Q6ZSK4 140 aa8.01□□□□□ -1.13
TTC28-201ENST00000397906 LINC00337Q8N6G1 96 aa8.01□□□□□ -1.13
TTC28-201ENST00000397906 MYO18BQ8IUG5 2567 aa8□□□□□ -1.13
TTC28-201ENST00000397906 UQCRQO14949 82 aa8□□□□□ -1.13
TTC28-201ENST00000397906 PRYO14603 147 aa8□□□□□ -1.13
TTC28-201ENST00000397906 TSPEAR-AS2P59090 65 aa8□□□□□ -1.13
TTC28-201ENST00000397906 LINC01547P58512 204 aaPredicted RBP7.99□□□□□ -1.13
TTC28-201ENST00000397906 ADAMTSL4-AS1Q5T5F5 129 aa7.99□□□□□ -1.13
TTC28-201ENST00000397906 MUC7Q8TAX7 377 aa7.99□□□□□ -1.13
TTC28-201ENST00000397906 A0A087WSZ3 146 aa7.99□□□□□ -1.13
TTC28-201ENST00000397906 PIEZO1Q92508 2521 aa7.99□□□□□ -1.13
TTC28-201ENST00000397906 COL27A1Q8IZC6 1860 aaPredicted RBP7.99□□□□□ -1.13
TTC28-201ENST00000397906 YPEL4Q96NS1 127 aa7.98□□□□□ -1.13
TTC28-201ENST00000397906 SPACA4Q8TDM5 124 aa7.98□□□□□ -1.13
TTC28-201ENST00000397906 LINC00575Q6W349 94 aa7.97□□□□□ -1.13
TTC28-201ENST00000397906 LRRK2Q5S007 2527 aa7.97□□□□□ -1.13
TTC28-201ENST00000397906 SERP2Q8N6R1 65 aa7.97□□□□□ -1.13
TTC28-201ENST00000397906 BEAN1Q3B7T3 259 aa7.97□□□□□ -1.13
TTC28-201ENST00000397906 A0A1B0GUV1 79 aa7.97□□□□□ -1.13
TTC28-201ENST00000397906 A6NED7 52 aa7.97□□□□□ -1.13
TTC28-201ENST00000397906 A0A0U1RQV1 116 aa7.96□□□□□ -1.13
TTC28-201ENST00000397906 LINC00208Q96KT6 92 aa7.96□□□□□ -1.13
TTC28-201ENST00000397906 Q6Q795 121 aa7.96□□□□□ -1.14
TTC28-201ENST00000397906 C22orf24Q9Y442 160 aa7.96□□□□□ -1.14
TTC28-201ENST00000397906 PCOTHQ58A44 107 aa7.95□□□□□ -1.14
TTC28-201ENST00000397906 TRBV7-6A0A0J9YX20 115 aa7.95□□□□□ -1.14
TTC28-201ENST00000397906 CHTF8P0CG12 524 aa7.95□□□□□ -1.14
TTC28-201ENST00000397906 Q8N2B8 174 aa7.94□□□□□ -1.14
TTC28-201ENST00000397906 AMELXQ99217 191 aa7.94□□□□□ -1.14
TTC28-201ENST00000397906 C16orf90A8MZG2 172 aa7.94□□□□□ -1.14
TTC28-201ENST00000397906 FAM229AH3BQW9 127 aa7.94□□□□□ -1.14
TTC28-201ENST00000397906 LIMD2Q9BT23 127 aa7.94□□□□□ -1.14
TTC28-201ENST00000397906 Q6JHZ5 121 aa7.93□□□□□ -1.14
TTC28-201ENST00000397906 CSDC2Q9Y534 153 aaKnown RBP7.93□□□□□ -1.14
TTC28-201ENST00000397906 URB1-AS1Q96HZ7 61 aa7.93□□□□□ -1.14
TTC28-201ENST00000397906 Q8N3U1 123 aa7.93□□□□□ -1.14
TTC28-201ENST00000397906 LINC00315P59091 139 aa7.92□□□□□ -1.14
TTC28-201ENST00000397906 SMCR5Q8TEV8 140 aa7.92□□□□□ -1.14
TTC28-201ENST00000397906 MOBPQ13875 183 aa7.91□□□□□ -1.14
TTC28-201ENST00000397906 A0A087WVE0 104 aa7.91□□□□□ -1.14
TTC28-201ENST00000397906 RTL8CO15255 209 aa7.91□□□□□ -1.14
TTC28-201ENST00000397906 PTPRBP23467 1997 aa7.91□□□□□ -1.14
TTC28-201ENST00000397906 C11orf72Q8NBR9 251 aa7.91□□□□□ -1.14
TTC28-201ENST00000397906 FAM240AA0A1B0GVK7 77 aa7.9□□□□□ -1.14
TTC28-201ENST00000397906 F8WDY8 70 aa7.9□□□□□ -1.14
TTC28-201ENST00000397906 JMJD1CQ15652 2540 aa7.9□□□□□ -1.14
TTC28-201ENST00000397906 IGKV2D-30A0A075B6S6 120 aa7.9□□□□□ -1.14
TTC28-201ENST00000397906 IGKV2-30P06310 120 aa7.9□□□□□ -1.14
TTC28-201ENST00000397906 HCG22E2RYF7 251 aa7.88□□□□□ -1.15
TTC28-201ENST00000397906 NDUFC1O43677 76 aa7.88□□□□□ -1.15
TTC28-201ENST00000397906 PHF5AQ7RTV0 110 aaKnown RBP7.88□□□□□ -1.15
TTC28-201ENST00000397906 V9GYY9 64 aa7.88□□□□□ -1.15
TTC28-201ENST00000397906 J3QL48 77 aa7.87□□□□□ -1.15
TTC28-201ENST00000397906 DOPEY1Q5JWR5 2465 aa7.87□□□□□ -1.15
TTC28-201ENST00000397906 H0Y9P7 68 aa7.86□□□□□ -1.15
TTC28-201ENST00000397906 LINC00310P59036 64 aa7.86□□□□□ -1.15
TTC28-201ENST00000397906 ATP5EP56381 51 aaPredicted RBP7.85□□□□□ -1.15
TTC28-201ENST00000397906 TLN1Q9Y490 2541 aaKnown RBP7.85□□□□□ -1.15
TTC28-201ENST00000397906 NBDYA0A0U1RRE5 68 aa7.85□□□□□ -1.15
TTC28-201ENST00000397906 CCDC179H3BU77 68 aa7.85□□□□□ -1.15
TTC28-201ENST00000397906 WWC2-AS2Q96NR7 200 aa7.85□□□□□ -1.15
TTC28-201ENST00000397906 LINC00167Q96N53 147 aa7.85□□□□□ -1.15
TTC28-201ENST00000397906 C2CD3Q4AC94 2353 aa7.85□□□□□ -1.15
TTC28-201ENST00000397906 PCSK5Q92824 1860 aa7.85□□□□□ -1.15
TTC28-201ENST00000397906 IMUPQ9GZP8 106 aa7.84□□□□□ -1.15
TTC28-201ENST00000397906 ZFYVE26Q68DK2 2539 aa7.84□□□□□ -1.15
TTC28-201ENST00000397906 KIAA0087Q14695 138 aa7.84□□□□□ -1.15
TTC28-201ENST00000397906 MUC4Q99102 2169 aa7.84□□□□□ -1.15
TTC28-201ENST00000397906 C7orf65Q6ZTY9 151 aa7.84□□□□□ -1.15
TTC28-201ENST00000397906 C6orf48Q9UBA6 75 aa7.84□□□□□ -1.16
TTC28-201ENST00000397906 LINC00588Q9Y4M8 146 aa7.84□□□□□ -1.16
TTC28-201ENST00000397906 ABCA12Q86UK0 2595 aa7.83□□□□□ -1.16
TTC28-201ENST00000397906 COX8CQ7Z4L0 72 aa7.83□□□□□ -1.16
TTC28-201ENST00000397906 A0A096LNJ9 63 aa7.82□□□□□ -1.16
TTC28-201ENST00000397906 COX7CP15954 63 aa7.82□□□□□ -1.16
TTC28-201ENST00000397906 TYMSOSQ8TAI1 123 aa7.82□□□□□ -1.16
TTC28-201ENST00000397906 SOSTDC1Q6X4U4 206 aa7.82□□□□□ -1.16
TTC28-201ENST00000397906 Q9UF83 564 aa7.82□□□□□ -1.16
TTC28-201ENST00000397906 MYO9AB2RTY4 2548 aa7.81□□□□□ -1.16
TTC28-201ENST00000397906 Q8NAQ8 132 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms