RNA–Protein interactions for RNA: ENST00000397021.5

MCF2L-206, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-206ENST00000397021 CKS1BP61024 79 aa6.05□□□□□ -1.44
MCF2L-206ENST00000397021 Q6ZRP5 223 aa6.05□□□□□ -1.44
MCF2L-206ENST00000397021 SMIM1B2RUZ4 78 aa6.04□□□□□ -1.44
MCF2L-206ENST00000397021 J3QL48 77 aa6.04□□□□□ -1.44
MCF2L-206ENST00000397021 TRGC2P03986 189 aa6.04□□□□□ -1.44
MCF2L-206ENST00000397021 RAB5BP61020 215 aa6.04□□□□□ -1.44
MCF2L-206ENST00000397021 PDZD11Q5EBL8 140 aa6.04□□□□□ -1.44
MCF2L-206ENST00000397021 TRBV30A0A0K0K1B3 111 aa6.03□□□□□ -1.44
MCF2L-206ENST00000397021 TLX1NBP0CAT3 122 aa6.03□□□□□ -1.44
MCF2L-206ENST00000397021 PHF5AQ7RTV0 110 aaKnown RBP6.03□□□□□ -1.44
MCF2L-206ENST00000397021 Q8IZM0 81 aa6.03□□□□□ -1.44
MCF2L-206ENST00000397021 MYCBP2O75592 4640 aa6.03□□□□□ -1.44
MCF2L-206ENST00000397021 IGLV5-45A0A087WSX0 123 aa6.02□□□□□ -1.45
MCF2L-206ENST00000397021 SCO1O75880 301 aa6.02□□□□□ -1.45
MCF2L-206ENST00000397021 IGLC3P0DOY3 106 aa6.02□□□□□ -1.45
MCF2L-206ENST00000397021 PRR3P79522 188 aaKnown RBP6.02□□□□□ -1.45
MCF2L-206ENST00000397021 FAM19A5Q7Z5A7 132 aaPredicted RBP6.02□□□□□ -1.45
MCF2L-206ENST00000397021 BAGE3Q86Y29 109 aa6.02□□□□□ -1.45
MCF2L-206ENST00000397021 FAM19A2Q8N3H0 131 aa6.02□□□□□ -1.45
MCF2L-206ENST00000397021 PKHD1L1Q86WI1 4243 aa6.01□□□□□ -1.45
MCF2L-206ENST00000397021 FLG2Q5D862 2391 aaPredicted RBP6.01□□□□□ -1.45
MCF2L-206ENST00000397021 COLCA2A8K830 154 aa6.01□□□□□ -1.45
MCF2L-206ENST00000397021 KRTAP29-1A8MX34 341 aaPredicted RBP6.01□□□□□ -1.45
MCF2L-206ENST00000397021 NDUFC2-KCTD14E9PQ53 114 aa6.01□□□□□ -1.45
MCF2L-206ENST00000397021 ATP5LO75964 103 aa6.01□□□□□ -1.45
MCF2L-206ENST00000397021 ZNF22P17026 224 aaPredicted RBP6.01□□□□□ -1.45
MCF2L-206ENST00000397021 C9orf129Q5T035 196 aaKnown RBP6.01□□□□□ -1.45
MCF2L-206ENST00000397021 KRTAP7-1Q8IUC3 87 aa6.01□□□□□ -1.45
MCF2L-206ENST00000397021 COX7B2Q8TF08 81 aa6.01□□□□□ -1.45
MCF2L-206ENST00000397021 CHCHD1Q96BP2 118 aaKnown RBP6.01□□□□□ -1.45
MCF2L-206ENST00000397021 F8VRH5 84 aa6□□□□□ -1.45
MCF2L-206ENST00000397021 H3BRM9 83 aa6□□□□□ -1.45
MCF2L-206ENST00000397021 HSBP1O75506 76 aa6□□□□□ -1.45
MCF2L-206ENST00000397021 XAGE1AQ9HD64 81 aa6□□□□□ -1.45
MCF2L-206ENST00000397021 C11orf86A6NJI1 115 aa5.99□□□□□ -1.45
MCF2L-206ENST00000397021 LINC00310P59036 64 aa5.99□□□□□ -1.45
MCF2L-206ENST00000397021 TMEM170BQ5T4T1 132 aa5.99□□□□□ -1.45
MCF2L-206ENST00000397021 KRTAP11-1Q8IUC1 163 aa5.99□□□□□ -1.45
MCF2L-206ENST00000397021 IFI27L1Q96BM0 104 aa5.99□□□□□ -1.45
MCF2L-206ENST00000397021 CHTOPQ9Y3Y2 248 aaKnown RBP5.99□□□□□ -1.45
MCF2L-206ENST00000397021 NUPR1O60356 82 aa5.98□□□□□ -1.45
MCF2L-206ENST00000397021 SERF1AO75920 110 aa5.98□□□□□ -1.45
MCF2L-206ENST00000397021 OXTP01178 125 aa5.98□□□□□ -1.45
MCF2L-206ENST00000397021 CXCL5P42830 114 aa5.98□□□□□ -1.45
MCF2L-206ENST00000397021 SERTAD4-AS1Q5TG53 156 aa5.98□□□□□ -1.45
MCF2L-206ENST00000397021 PSORS1C2Q9UIG4 136 aa5.98□□□□□ -1.45
MCF2L-206ENST00000397021 HERC1Q15751 4861 aa5.98□□□□□ -1.45
MCF2L-206ENST00000397021 LRP1Q07954 4544 aaKnown RBP5.97□□□□□ -1.45
MCF2L-206ENST00000397021 IGLV5-39A0A0G2JS06 123 aa5.97□□□□□ -1.45
MCF2L-206ENST00000397021 H0Y8G0 127 aa5.97□□□□□ -1.45
MCF2L-206ENST00000397021 M0QXV9 152 aa5.97□□□□□ -1.45
MCF2L-206ENST00000397021 C1orf137Q5JT78 98 aa5.97□□□□□ -1.45
MCF2L-206ENST00000397021 FAT3Q8TDW7 4589 aa5.97□□□□□ -1.45
MCF2L-206ENST00000397021 FABP4P15090 132 aa5.96□□□□□ -1.46
MCF2L-206ENST00000397021 ZNF625Q96I27 306 aaPredicted RBP5.96□□□□□ -1.46
MCF2L-206ENST00000397021 PFN2P35080 140 aa5.95□□□□□ -1.46
MCF2L-206ENST00000397021 UBE2BP63146 152 aa5.95□□□□□ -1.46
MCF2L-206ENST00000397021 SRSF9Q13242 221 aaKnown RBP eCLIP5.95□□□□□ -1.46
MCF2L-206ENST00000397021 TRAV12-1A0A0B4J245 112 aa5.94□□□□□ -1.46
MCF2L-206ENST00000397021 LEPROTL1O95214 131 aa5.94□□□□□ -1.46
MCF2L-206ENST00000397021 SPINK6Q6UWN8 80 aa5.94□□□□□ -1.46
MCF2L-206ENST00000397021 C22orf24Q9Y442 160 aa5.94□□□□□ -1.46
MCF2L-206ENST00000397021 TMEM223A0PJW6 202 aa5.93□□□□□ -1.46
MCF2L-206ENST00000397021 MT1HL1P0DM35 61 aa5.93□□□□□ -1.46
MCF2L-206ENST00000397021 DMBT1Q9UGM3 2413 aaPredicted RBP5.92□□□□□ -1.46
MCF2L-206ENST00000397021 A0A0U1RRA0 63 aa5.92□□□□□ -1.46
MCF2L-206ENST00000397021 GAGE10A6NGK3 116 aa5.92□□□□□ -1.46
MCF2L-206ENST00000397021 IGLV7-43P04211 117 aa5.92□□□□□ -1.46
MCF2L-206ENST00000397021 ODF1Q14990 250 aa5.92□□□□□ -1.46
MCF2L-206ENST00000397021 PMCHL2Q9BQD1 86 aa5.92□□□□□ -1.46
MCF2L-206ENST00000397021 ERG28Q9UKR5 140 aa5.92□□□□□ -1.46
MCF2L-206ENST00000397021 HIST1H2BKO60814 126 aa5.91□□□□□ -1.46
MCF2L-206ENST00000397021 HIST1H2BJP06899 126 aa5.91□□□□□ -1.46
MCF2L-206ENST00000397021 HIST1H2BOP23527 126 aa5.91□□□□□ -1.46
MCF2L-206ENST00000397021 HIST1H2BBP33778 126 aa5.91□□□□□ -1.46
MCF2L-206ENST00000397021 HIST1H2BDP58876 126 aa5.91□□□□□ -1.46
MCF2L-206ENST00000397021 HIST1H2BCP62807 126 aa5.91□□□□□ -1.46
MCF2L-206ENST00000397021 HIST2H2BEQ16778 126 aa5.91□□□□□ -1.46
MCF2L-206ENST00000397021 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.91□□□□□ -1.46
MCF2L-206ENST00000397021 HIST1H2BHQ93079 126 aa5.91□□□□□ -1.46
MCF2L-206ENST00000397021 HIST1H2BNQ99877 126 aa5.91□□□□□ -1.46
MCF2L-206ENST00000397021 HIST1H2BMQ99879 126 aa5.91□□□□□ -1.46
MCF2L-206ENST00000397021 HSPB8Q9UJY1 196 aa5.91□□□□□ -1.46
MCF2L-206ENST00000397021 RPL37AP8A6NKH3 93 aa5.9□□□□□ -1.46
MCF2L-206ENST00000397021 REG3GQ6UW15 175 aa5.9□□□□□ -1.46
MCF2L-206ENST00000397021 MRPL55Q7Z7F7 128 aaKnown RBP5.9□□□□□ -1.46
MCF2L-206ENST00000397021 SND1-IT1Q9HBX3 110 aa5.9□□□□□ -1.46
MCF2L-206ENST00000397021 LINC00158P58513 81 aa5.89□□□□□ -1.47
MCF2L-206ENST00000397021 LBHQ53QV2 105 aaPredicted RBP5.89□□□□□ -1.47
MCF2L-206ENST00000397021 LINC01600Q96MT4 127 aa5.89□□□□□ -1.47
MCF2L-206ENST00000397021 LINC00167Q96N53 147 aa5.89□□□□□ -1.47
MCF2L-206ENST00000397021 TSPEAR-AS2P59090 65 aa5.88□□□□□ -1.47
MCF2L-206ENST00000397021 NKAPP1Q8N9T2 125 aa5.88□□□□□ -1.47
MCF2L-206ENST00000397021 Q8NDZ9 215 aa5.88□□□□□ -1.47
MCF2L-206ENST00000397021 MAP1LC3CQ9BXW4 147 aa5.88□□□□□ -1.47
MCF2L-206ENST00000397021 TP73-AS1Q9UF72 201 aa5.88□□□□□ -1.47
MCF2L-206ENST00000397021 PLA2G2DQ9UNK4 145 aa5.88□□□□□ -1.47
MCF2L-206ENST00000397021 DPM2O94777 84 aa5.87□□□□□ -1.47
MCF2L-206ENST00000397021 IGKCP01834 107 aa5.87□□□□□ -1.47
MCF2L-206ENST00000397021 SMIM13P0DJ93 91 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms