RNA–Protein interactions for RNA: ENST00000397013.2

NUP98-206, Transcript of nucleoporin 98, humanhuman

TSL 5

Gene NUP98, Length 939 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-206ENST00000397013 ZNF56Q15929 161 aa5□□□□□ -1.61
NUP98-206ENST00000397013 IGKV2-24A0A0C4DH68 120 aa4.99□□□□□ -1.61
NUP98-206ENST00000397013 TRBV6-1A0A0K0K1D8 114 aa4.99□□□□□ -1.61
NUP98-206ENST00000397013 C9JAW5 83 aa4.99□□□□□ -1.61
NUP98-206ENST00000397013 TMEM250H0YL14 139 aa4.99□□□□□ -1.61
NUP98-206ENST00000397013 SRP19P09132 144 aaKnown RBP4.99□□□□□ -1.61
NUP98-206ENST00000397013 NTF3P20783 257 aa4.99□□□□□ -1.61
NUP98-206ENST00000397013 CAMPP49913 170 aa4.99□□□□□ -1.61
NUP98-206ENST00000397013 PRR3P79522 188 aaKnown RBP4.99□□□□□ -1.61
NUP98-206ENST00000397013 REG3AQ06141 175 aa4.99□□□□□ -1.61
NUP98-206ENST00000397013 COX8CQ7Z4L0 72 aa4.99□□□□□ -1.61
NUP98-206ENST00000397013 TMEM101Q96IK0 257 aa4.99□□□□□ -1.61
NUP98-206ENST00000397013 PMCHL2Q9BQD1 86 aa4.99□□□□□ -1.61
NUP98-206ENST00000397013 SPANXDQ9BXN6 97 aa4.99□□□□□ -1.61
NUP98-206ENST00000397013 FAM231BA6NCW3 169 aa4.98□□□□□ -1.61
NUP98-206ENST00000397013 PAGE4O60829 102 aa4.98□□□□□ -1.61
NUP98-206ENST00000397013 HIGD2BQ4VC39 106 aa4.98□□□□□ -1.61
NUP98-206ENST00000397013 RPL7L1Q6DKI1 246 aaKnown RBP4.98□□□□□ -1.61
NUP98-206ENST00000397013 C15orf56Q8N910 161 aa4.98□□□□□ -1.61
NUP98-206ENST00000397013 LTAP01374 205 aa4.97□□□□□ -1.61
NUP98-206ENST00000397013 NDUFV3P56181 108 aaKnown RBP4.97□□□□□ -1.61
NUP98-206ENST00000397013 SERF2P84101 59 aa4.97□□□□□ -1.61
NUP98-206ENST00000397013 SRSF9Q13242 221 aaKnown RBP eCLIP4.97□□□□□ -1.61
NUP98-206ENST00000397013 KIAA1644Q3SXP7 199 aa4.97□□□□□ -1.61
NUP98-206ENST00000397013 Q6ZUT4 128 aa4.97□□□□□ -1.61
NUP98-206ENST00000397013 RNF185Q96GF1 192 aa4.97□□□□□ -1.61
NUP98-206ENST00000397013 FAT4Q6V0I7 4981 aa4.96□□□□□ -1.61
NUP98-206ENST00000397013 TRBV25-1A0A075B6N4 114 aa4.96□□□□□ -1.62
NUP98-206ENST00000397013 IGKV3OR2-268A0A0C4DH90 116 aa4.96□□□□□ -1.62
NUP98-206ENST00000397013 IGLV5-39A0A0G2JS06 123 aa4.96□□□□□ -1.62
NUP98-206ENST00000397013 CCDC179H3BU77 68 aa4.96□□□□□ -1.62
NUP98-206ENST00000397013 MEIG1Q5JSS6 88 aa4.96□□□□□ -1.62
NUP98-206ENST00000397013 C7orf33Q8WU49 177 aa4.96□□□□□ -1.62
NUP98-206ENST00000397013 LINC00526Q96FQ7 95 aa4.96□□□□□ -1.62
NUP98-206ENST00000397013 A0A096LNI7 61 aa4.95□□□□□ -1.62
NUP98-206ENST00000397013 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.95□□□□□ -1.62
NUP98-206ENST00000397013 IGHV1-24A0A0C4DH33 117 aa4.95□□□□□ -1.62
NUP98-206ENST00000397013 CTXND1A0A1B0GTU2 59 aa4.95□□□□□ -1.62
NUP98-206ENST00000397013 A0A1W2PPM0 123 aa4.95□□□□□ -1.62
NUP98-206ENST00000397013 M0QY20 66 aa4.95□□□□□ -1.62
NUP98-206ENST00000397013 IFITM1P13164 125 aa4.95□□□□□ -1.62
NUP98-206ENST00000397013 UBE2G1P62253 170 aa4.95□□□□□ -1.62
NUP98-206ENST00000397013 SPANXN1Q5VSR9 72 aa4.95□□□□□ -1.62
NUP98-206ENST00000397013 C18orf32Q8TCD1 76 aa4.95□□□□□ -1.62
NUP98-206ENST00000397013 FMC1Q96HJ9 113 aa4.95□□□□□ -1.62
NUP98-206ENST00000397013 MANBALQ9NQG1 85 aa4.95□□□□□ -1.62
NUP98-206ENST00000397013 SPCS1Q9Y6A9 102 aa4.95□□□□□ -1.62
NUP98-206ENST00000397013 TRAV8-4A0A0B4J246 113 aa4.94□□□□□ -1.62
NUP98-206ENST00000397013 A0A1B0GV50 99 aa4.94□□□□□ -1.62
NUP98-206ENST00000397013 P01737 135 aa4.94□□□□□ -1.62
NUP98-206ENST00000397013 MGPP08493 103 aa4.94□□□□□ -1.62
NUP98-206ENST00000397013 FABP2P12104 132 aa4.94□□□□□ -1.62
NUP98-206ENST00000397013 SPINK6Q6UWN8 80 aa4.94□□□□□ -1.62
NUP98-206ENST00000397013 TRAV9-1A0A075B6T8 112 aa4.93□□□□□ -1.62
NUP98-206ENST00000397013 A0A1B0GUV1 79 aa4.93□□□□□ -1.62
NUP98-206ENST00000397013 MT-ATP8P03928 68 aa4.93□□□□□ -1.62
NUP98-206ENST00000397013 TAL2Q16559 108 aa4.93□□□□□ -1.62
NUP98-206ENST00000397013 SLC25A34Q6PIV7 304 aa4.93□□□□□ -1.62
NUP98-206ENST00000397013 RASL11AQ6T310 242 aa4.93□□□□□ -1.62
NUP98-206ENST00000397013 TMEM243Q9BU79 118 aa4.93□□□□□ -1.62
NUP98-206ENST00000397013 H7C1H1 209 aa4.92□□□□□ -1.62
NUP98-206ENST00000397013 OR5AL1P0C617 328 aa4.92□□□□□ -1.62
NUP98-206ENST00000397013 KRTDAPP60985 99 aa4.92□□□□□ -1.62
NUP98-206ENST00000397013 C4orf26Q17RF5 130 aa4.92□□□□□ -1.62
NUP98-206ENST00000397013 BAGE2Q86Y30 109 aa4.92□□□□□ -1.62
NUP98-206ENST00000397013 GATD1Q8NB37 220 aa4.92□□□□□ -1.62
NUP98-206ENST00000397013 NAA38Q9BRA0 125 aaKnown RBP4.92□□□□□ -1.62
NUP98-206ENST00000397013 TRAPPC1Q9Y5R8 145 aa4.92□□□□□ -1.62
NUP98-206ENST00000397013 TRAV1-1A0A0B4J248 108 aa4.91□□□□□ -1.62
NUP98-206ENST00000397013 A0A1W2PNN7 141 aa4.91□□□□□ -1.62
NUP98-206ENST00000397013 NUPR1O60356 82 aa4.91□□□□□ -1.62
NUP98-206ENST00000397013 GAGE2BQ13066 116 aa4.91□□□□□ -1.62
NUP98-206ENST00000397013 GAGE2EQ4V326 116 aa4.91□□□□□ -1.62
NUP98-206ENST00000397013 C1orf195Q5TG92 126 aa4.91□□□□□ -1.62
NUP98-206ENST00000397013 REG3GQ6UW15 175 aa4.91□□□□□ -1.62
NUP98-206ENST00000397013 CHCHD10Q8WYQ3 142 aaPredicted RBP4.91□□□□□ -1.62
NUP98-206ENST00000397013 GAGE2DQ9UEU5 116 aa4.91□□□□□ -1.62
NUP98-206ENST00000397013 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.9□□□□□ -1.63
NUP98-206ENST00000397013 IGKV2-29A2NJV5 120 aaPredicted RBP4.9□□□□□ -1.63
NUP98-206ENST00000397013 H3BUT2 72 aa4.9□□□□□ -1.63
NUP98-206ENST00000397013 GVQW2A0A096LPI5 108 aaPredicted RBP4.89□□□□□ -1.63
NUP98-206ENST00000397013 TRAV26-2A0A0B4J265 109 aa4.89□□□□□ -1.63
NUP98-206ENST00000397013 LOC107984640A0A0U1RRK4 108 aa4.89□□□□□ -1.63
NUP98-206ENST00000397013 UBE2L6O14933 153 aa4.89□□□□□ -1.63
NUP98-206ENST00000397013 SERF1AO75920 110 aa4.89□□□□□ -1.63
NUP98-206ENST00000397013 ATP5LO75964 103 aa4.89□□□□□ -1.63
NUP98-206ENST00000397013 C3orf79P0CE67 100 aa4.89□□□□□ -1.63
NUP98-206ENST00000397013 IGLC6P0CF74 106 aa4.89□□□□□ -1.63
NUP98-206ENST00000397013 FOXA3P55318 350 aaPredicted RBP4.89□□□□□ -1.63
NUP98-206ENST00000397013 Q6ZRP5 223 aa4.89□□□□□ -1.63
NUP98-206ENST00000397013 FAM19A1Q7Z5A9 133 aa4.89□□□□□ -1.63
NUP98-206ENST00000397013 PRR26Q8N8Z3 221 aa4.89□□□□□ -1.63
NUP98-206ENST00000397013 NRACQ8N912 160 aa4.89□□□□□ -1.63
NUP98-206ENST00000397013 URB1-AS1Q96HZ7 61 aa4.89□□□□□ -1.63
NUP98-206ENST00000397013 H3BMG7 143 aa4.88□□□□□ -1.63
NUP98-206ENST00000397013 SYS1-DBNDD2H3BUS1 97 aa4.88□□□□□ -1.63
NUP98-206ENST00000397013 XCL1P47992 114 aa4.88□□□□□ -1.63
NUP98-206ENST00000397013 CCL20P78556 96 aa4.88□□□□□ -1.63
NUP98-206ENST00000397013 LYZL1Q6UWQ5 148 aa4.88□□□□□ -1.63
NUP98-206ENST00000397013 ATOH7Q8N100 152 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms