RNA–Protein interactions for RNA: ENST00000396832.5

CSNK1E-203, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-203ENST00000396832 APCP25054 2843 aa16.93■□□□□ 0.3
CSNK1E-203ENST00000396832 DSCR9P59020 149 aa16.93■□□□□ 0.3
CSNK1E-203ENST00000396832 C4orf3Q8WVX3 66 aa16.93■□□□□ 0.3
CSNK1E-203ENST00000396832 HELZ2Q9BYK8 2649 aaKnown RBP16.93■□□□□ 0.3
CSNK1E-203ENST00000396832 COX7B2Q8TF08 81 aa16.93■□□□□ 0.3
CSNK1E-203ENST00000396832 J3QLI3 93 aa16.91■□□□□ 0.3
CSNK1E-203ENST00000396832 SLPIP03973 132 aa16.91■□□□□ 0.3
CSNK1E-203ENST00000396832 DSCR8Q96T75 97 aa16.91■□□□□ 0.3
CSNK1E-203ENST00000396832 CCL18P55774 89 aa16.9■□□□□ 0.3
CSNK1E-203ENST00000396832 TRGV2A0A075B6R0 118 aa16.89■□□□□ 0.29
CSNK1E-203ENST00000396832 RPL35AP18077 110 aaKnown RBP16.89■□□□□ 0.29
CSNK1E-203ENST00000396832 NOTCH2Q04721 2471 aa16.88■□□□□ 0.29
CSNK1E-203ENST00000396832 OXTP01178 125 aa16.87■□□□□ 0.29
CSNK1E-203ENST00000396832 PFN2P35080 140 aa16.87■□□□□ 0.29
CSNK1E-203ENST00000396832 TRBV10-1A0A0K0K1A3 114 aa16.86■□□□□ 0.29
CSNK1E-203ENST00000396832 FSHBP01225 129 aa16.86■□□□□ 0.29
CSNK1E-203ENST00000396832 TMEM243Q9BU79 118 aa16.86■□□□□ 0.29
CSNK1E-203ENST00000396832 IGLV4-60A0A075B6I1 120 aa16.84■□□□□ 0.29
CSNK1E-203ENST00000396832 PAX4O43316 350 aa16.83■□□□□ 0.29
CSNK1E-203ENST00000396832 ITPR2Q14571 2701 aa16.83■□□□□ 0.28
CSNK1E-203ENST00000396832 IL17DQ8TAD2 202 aa16.83■□□□□ 0.28
CSNK1E-203ENST00000396832 ORMDL1Q9P0S3 153 aa16.81■□□□□ 0.28
CSNK1E-203ENST00000396832 CCKP06307 115 aa16.81■□□□□ 0.28
CSNK1E-203ENST00000396832 HILS1P60008 231 aa16.81■□□□□ 0.28
CSNK1E-203ENST00000396832 SS18Q15532 418 aa16.81■□□□□ 0.28
CSNK1E-203ENST00000396832 TRGV4A0A0C4DH28 118 aa16.79■□□□□ 0.28
CSNK1E-203ENST00000396832 C4orf26Q17RF5 130 aa16.79■□□□□ 0.28
CSNK1E-203ENST00000396832 IBA57-AS1B1ANH7 110 aa16.78■□□□□ 0.28
CSNK1E-203ENST00000396832 CLPSL2Q6UWE3 100 aa16.78■□□□□ 0.28
CSNK1E-203ENST00000396832 WFDC9Q8NEX5 89 aa16.78■□□□□ 0.28
CSNK1E-203ENST00000396832 FHL2Q14192 279 aa16.78■□□□□ 0.28
CSNK1E-203ENST00000396832 HECTD1Q9ULT8 2610 aa16.78■□□□□ 0.28
CSNK1E-203ENST00000396832 CCL24O00175 119 aa16.77■□□□□ 0.28
CSNK1E-203ENST00000396832 GIG44P09565 113 aaPredicted RBP16.76■□□□□ 0.27
CSNK1E-203ENST00000396832 WIPF1O43516 503 aa16.76■□□□□ 0.27
CSNK1E-203ENST00000396832 GHRHP01286 108 aa16.75■□□□□ 0.27
CSNK1E-203ENST00000396832 TRAV23DV6A0A075B6W5 121 aa16.74■□□□□ 0.27
CSNK1E-203ENST00000396832 IGHV3OR16-9A0A0B4J2B5 98 aa16.74■□□□□ 0.27
CSNK1E-203ENST00000396832 TRBV6-4A0A1B0GX49 114 aa16.74■□□□□ 0.27
CSNK1E-203ENST00000396832 FASNP49327 2511 aaKnown RBP16.73■□□□□ 0.27
CSNK1E-203ENST00000396832 PLAC8L1A1L4L8 177 aa16.73■□□□□ 0.27
CSNK1E-203ENST00000396832 A0A096LPF7 62 aa16.72■□□□□ 0.27
CSNK1E-203ENST00000396832 S100A7L2Q5SY68 101 aa16.72■□□□□ 0.27
CSNK1E-203ENST00000396832 Q5XG85 94 aa16.72■□□□□ 0.27
CSNK1E-203ENST00000396832 FAM19A1Q7Z5A9 133 aa16.72■□□□□ 0.27
CSNK1E-203ENST00000396832 DEFB130BP0DP73 79 aa16.72■□□□□ 0.27
CSNK1E-203ENST00000396832 DEFB130AP0DP74 79 aa16.72■□□□□ 0.27
CSNK1E-203ENST00000396832 HRCT1Q6UXD1 115 aa16.71■□□□□ 0.27
CSNK1E-203ENST00000396832 DNAJC9-AS1A6NH13 148 aa16.71■□□□□ 0.26
CSNK1E-203ENST00000396832 LY6G6DO95868 133 aa16.71■□□□□ 0.26
CSNK1E-203ENST00000396832 ENHOQ6UWT2 76 aa16.7■□□□□ 0.26
CSNK1E-203ENST00000396832 XCL1P47992 114 aa16.7■□□□□ 0.26
CSNK1E-203ENST00000396832 A0A087WZ39 114 aa16.69■□□□□ 0.26
CSNK1E-203ENST00000396832 TRAV25A0A0B4J276 109 aa16.69■□□□□ 0.26
CSNK1E-203ENST00000396832 JMJD7-PLA2G4BH0Y9G9 81 aa16.69■□□□□ 0.26
CSNK1E-203ENST00000396832 ESM1Q9NQ30 184 aa16.68■□□□□ 0.26
CSNK1E-203ENST00000396832 ATP5EP2Q5VTU8 51 aa16.67■□□□□ 0.26
CSNK1E-203ENST00000396832 PRR3P79522 188 aaKnown RBP16.67■□□□□ 0.26
CSNK1E-203ENST00000396832 NDUFC2O95298 119 aa16.66■□□□□ 0.26
CSNK1E-203ENST00000396832 C6orf226Q5I0X4 101 aa16.66■□□□□ 0.26
CSNK1E-203ENST00000396832 DEFB113Q30KQ7 82 aa16.66■□□□□ 0.26
CSNK1E-203ENST00000396832 LINC00167Q96N53 147 aa16.66■□□□□ 0.26
CSNK1E-203ENST00000396832 TRBV6-8A0A0A6YYG3 113 aa16.66■□□□□ 0.26
CSNK1E-203ENST00000396832 Q8N814 137 aa16.66■□□□□ 0.26
CSNK1E-203ENST00000396832 C16orf74Q96GX8 76 aa16.65■□□□□ 0.26
CSNK1E-203ENST00000396832 C20orf197Q8N268 126 aa16.65■□□□□ 0.26
CSNK1E-203ENST00000396832 NDUFC2-KCTD14E9PQ53 114 aa16.64■□□□□ 0.25
CSNK1E-203ENST00000396832 TMEM256-PLSCR3K7ERE1 68 aa16.64■□□□□ 0.25
CSNK1E-203ENST00000396832 LYPD5Q6UWN5 251 aa16.63■□□□□ 0.25
CSNK1E-203ENST00000396832 WFDC11Q8NEX6 87 aa16.62■□□□□ 0.25
CSNK1E-203ENST00000396832 VWFP04275 2813 aa16.61■□□□□ 0.25
CSNK1E-203ENST00000396832 TMEM86BQ8N661 226 aa16.61■□□□□ 0.25
CSNK1E-203ENST00000396832 HIVEP2P31629 2446 aa16.61■□□□□ 0.25
CSNK1E-203ENST00000396832 RNASE1P07998 156 aaKnown RBP16.61■□□□□ 0.25
CSNK1E-203ENST00000396832 NANOS2P60321 138 aaKnown RBP16.61■□□□□ 0.25
CSNK1E-203ENST00000396832 UBL5Q9BZL1 73 aa16.61■□□□□ 0.25
CSNK1E-203ENST00000396832 UNC79Q9P2D8 2635 aa16.59■□□□□ 0.25
CSNK1E-203ENST00000396832 LINC00959A0A1B0GUT2 108 aa16.58■□□□□ 0.25
CSNK1E-203ENST00000396832 TRBV10-3A0A0K0K1G6 114 aa16.57■□□□□ 0.24
CSNK1E-203ENST00000396832 IGLV10-54A0A075B6I4 117 aa16.56■□□□□ 0.24
CSNK1E-203ENST00000396832 Q8N3U1 123 aa16.56■□□□□ 0.24
CSNK1E-203ENST00000396832 GYPEP15421 78 aa16.55■□□□□ 0.24
CSNK1E-203ENST00000396832 FAM236DA0A1B0GTK5 79 aa16.55■□□□□ 0.24
CSNK1E-203ENST00000396832 FAM236CP0DP71 79 aa16.55■□□□□ 0.24
CSNK1E-203ENST00000396832 CSNK1G2-AS1Q8NCQ2 148 aa16.55■□□□□ 0.24
CSNK1E-203ENST00000396832 KRTAP1-3Q8IUG1 177 aa16.54■□□□□ 0.24
CSNK1E-203ENST00000396832 C19orf73Q9NVV2 129 aa16.54■□□□□ 0.24
CSNK1E-203ENST00000396832 KMT2BQ9UMN6 2715 aaPredicted RBP16.53■□□□□ 0.24
CSNK1E-203ENST00000396832 C9orf116Q5BN46 136 aaPredicted RBP16.53■□□□□ 0.24
CSNK1E-203ENST00000396832 DEFB4AO15263 64 aa16.52■□□□□ 0.23
CSNK1E-203ENST00000396832 LINC01006Q8NI28 216 aa16.51■□□□□ 0.23
CSNK1E-203ENST00000396832 H7BZZ5 65 aa16.49■□□□□ 0.23
CSNK1E-203ENST00000396832 Q8IZM0 81 aa16.49■□□□□ 0.23
CSNK1E-203ENST00000396832 PDZD2O15018 2839 aa16.49■□□□□ 0.23
CSNK1E-203ENST00000396832 C6orf99Q4VX62 202 aa16.48■□□□□ 0.23
CSNK1E-203ENST00000396832 TRAV7A0A075B6U4 112 aa16.47■□□□□ 0.23
CSNK1E-203ENST00000396832 IGLV1-51P01701 117 aa16.47■□□□□ 0.23
CSNK1E-203ENST00000396832 RBM3P98179 157 aaKnown RBP16.46■□□□□ 0.23
CSNK1E-203ENST00000396832 Q6ZQT0 140 aa16.46■□□□□ 0.23
CSNK1E-203ENST00000396832 SERP1Q9Y6X1 66 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 127.7 ms