RNA–Protein interactions for RNA: ENST00000396828.8

NEDD8-202, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-202ENST00000396828 LINC00469Q8N7U9 141 aa6.77□□□□□ -1.33
NEDD8-202ENST00000396828 RMI2Q96E14 147 aa6.77□□□□□ -1.33
NEDD8-202ENST00000396828 VAMP8Q9BV40 100 aa6.77□□□□□ -1.33
NEDD8-202ENST00000396828 IGLV10-54A0A075B6I4 117 aa6.76□□□□□ -1.33
NEDD8-202ENST00000396828 CD164L2Q6UWJ8 174 aa6.76□□□□□ -1.33
NEDD8-202ENST00000396828 CHCHD10Q8WYQ3 142 aaPredicted RBP6.76□□□□□ -1.33
NEDD8-202ENST00000396828 C1orf43Q9BWL3 253 aa6.76□□□□□ -1.33
NEDD8-202ENST00000396828 UBR4Q5T4S7 5183 aa6.75□□□□□ -1.33
NEDD8-202ENST00000396828 IGLV5-45A0A087WSX0 123 aa6.75□□□□□ -1.33
NEDD8-202ENST00000396828 ZNF22P17026 224 aaPredicted RBP6.75□□□□□ -1.33
NEDD8-202ENST00000396828 KRTAP10-4P60372 401 aaPredicted RBP6.75□□□□□ -1.33
NEDD8-202ENST00000396828 COX6A2Q02221 97 aa6.75□□□□□ -1.33
NEDD8-202ENST00000396828 C12orf57Q99622 126 aa6.75□□□□□ -1.33
NEDD8-202ENST00000396828 TM2D2Q9BX73 214 aa6.75□□□□□ -1.33
NEDD8-202ENST00000396828 CDKN2A-AS1Q9UH64 79 aa6.75□□□□□ -1.33
NEDD8-202ENST00000396828 IGHV3OR16-9A0A0B4J2B5 98 aa6.74□□□□□ -1.33
NEDD8-202ENST00000396828 hDV102S1A0JD36 115 aa6.74□□□□□ -1.33
NEDD8-202ENST00000396828 GAGE12HA6NDE8 117 aa6.74□□□□□ -1.33
NEDD8-202ENST00000396828 SCXQ7RTU7 201 aa6.74□□□□□ -1.33
NEDD8-202ENST00000396828 STPG4Q8N801 248 aa6.74□□□□□ -1.33
NEDD8-202ENST00000396828 COX11Q9Y6N1 276 aa6.74□□□□□ -1.33
NEDD8-202ENST00000396828 IGKV2D-24A0A075B6R9 120 aa6.73□□□□□ -1.33
NEDD8-202ENST00000396828 TMEM223A0PJW6 202 aa6.73□□□□□ -1.33
NEDD8-202ENST00000396828 KRTAP29-1A8MX34 341 aaPredicted RBP6.73□□□□□ -1.33
NEDD8-202ENST00000396828 COX7A2LO14548 114 aa6.73□□□□□ -1.33
NEDD8-202ENST00000396828 MALP21145 153 aa6.73□□□□□ -1.33
NEDD8-202ENST00000396828 MAJINQ3KP22 176 aa6.73□□□□□ -1.33
NEDD8-202ENST00000396828 LINC00518Q8N0U6 118 aa6.73□□□□□ -1.33
NEDD8-202ENST00000396828 PAM16Q9Y3D7 125 aa6.73□□□□□ -1.33
NEDD8-202ENST00000396828 A0A087WZ39 114 aa6.72□□□□□ -1.33
NEDD8-202ENST00000396828 E9PLD3 99 aa6.72□□□□□ -1.33
NEDD8-202ENST00000396828 APOMO95445 188 aa6.72□□□□□ -1.33
NEDD8-202ENST00000396828 PLA2G1BP04054 148 aaKnown RBP6.72□□□□□ -1.33
NEDD8-202ENST00000396828 SPINK8P0C7L1 97 aa6.72□□□□□ -1.33
NEDD8-202ENST00000396828 FOXI1Q12951 378 aa6.72□□□□□ -1.33
NEDD8-202ENST00000396828 SPATA45Q537H7 98 aa6.72□□□□□ -1.33
NEDD8-202ENST00000396828 C5orf38Q86SI9 138 aa6.72□□□□□ -1.33
NEDD8-202ENST00000396828 LINC01561Q8N1V8 128 aa6.72□□□□□ -1.33
NEDD8-202ENST00000396828 IGHV3-64A0A075B6Q5 118 aa6.71□□□□□ -1.34
NEDD8-202ENST00000396828 IGHV1-58A0A0C4DH39 117 aa6.71□□□□□ -1.34
NEDD8-202ENST00000396828 LEPROTO15243 131 aa6.71□□□□□ -1.34
NEDD8-202ENST00000396828 NMUP48645 174 aa6.71□□□□□ -1.34
NEDD8-202ENST00000396828 CIRBP-AS1Q8TBR5 109 aa6.71□□□□□ -1.34
NEDD8-202ENST00000396828 PLEKHB2Q96CS7 222 aa6.71□□□□□ -1.34
NEDD8-202ENST00000396828 SMIM1B2RUZ4 78 aa6.7□□□□□ -1.34
NEDD8-202ENST00000396828 LGALS3P17931 250 aaKnown RBP6.7□□□□□ -1.34
NEDD8-202ENST00000396828 ANKRD39Q53RE8 183 aa6.7□□□□□ -1.34
NEDD8-202ENST00000396828 LCE2AQ5TA79 106 aaPredicted RBP6.7□□□□□ -1.34
NEDD8-202ENST00000396828 PRSS2P07478 247 aa6.69□□□□□ -1.34
NEDD8-202ENST00000396828 CFAP161Q6P656 301 aa6.69□□□□□ -1.34
NEDD8-202ENST00000396828 IGLV5-39A0A0G2JS06 123 aa6.68□□□□□ -1.34
NEDD8-202ENST00000396828 J3QQQ9 107 aa6.68□□□□□ -1.34
NEDD8-202ENST00000396828 GHRHP01286 108 aa6.68□□□□□ -1.34
NEDD8-202ENST00000396828 KRTAP26-1Q6PEX3 210 aa6.68□□□□□ -1.34
NEDD8-202ENST00000396828 COX7B2Q8TF08 81 aa6.68□□□□□ -1.34
NEDD8-202ENST00000396828 ORAOV1Q8WV07 137 aa6.68□□□□□ -1.34
NEDD8-202ENST00000396828 TOMM7Q9P0U1 55 aa6.68□□□□□ -1.34
NEDD8-202ENST00000396828 IGKV2D-26A0A0A0MRZ7 120 aa6.67□□□□□ -1.34
NEDD8-202ENST00000396828 TSTD3H0UI37 97 aa6.67□□□□□ -1.34
NEDD8-202ENST00000396828 HNRNPA3P51991 378 aaKnown RBP6.67□□□□□ -1.34
NEDD8-202ENST00000396828 C6orf226Q5I0X4 101 aa6.67□□□□□ -1.34
NEDD8-202ENST00000396828 Q8IZM0 81 aa6.67□□□□□ -1.34
NEDD8-202ENST00000396828 COX8AP10176 69 aa6.66□□□□□ -1.34
NEDD8-202ENST00000396828 CKS1BP61024 79 aa6.66□□□□□ -1.34
NEDD8-202ENST00000396828 SLC25A34Q6PIV7 304 aa6.66□□□□□ -1.34
NEDD8-202ENST00000396828 SFTA2Q6UW10 78 aa6.66□□□□□ -1.34
NEDD8-202ENST00000396828 C14orf144Q96I85 54 aa6.66□□□□□ -1.34
NEDD8-202ENST00000396828 MYMXA0A1B0GTQ4 84 aa6.65□□□□□ -1.34
NEDD8-202ENST00000396828 ZNF815PA8K554 130 aa6.65□□□□□ -1.34
NEDD8-202ENST00000396828 ZNF561-AS1K7EIQ3 104 aa6.65□□□□□ -1.34
NEDD8-202ENST00000396828 CXCL5P42830 114 aa6.65□□□□□ -1.34
NEDD8-202ENST00000396828 SPAG11BQ08648 103 aa6.65□□□□□ -1.34
NEDD8-202ENST00000396828 PCP2Q8IVA1 136 aa6.65□□□□□ -1.34
NEDD8-202ENST00000396828 UQCR10Q9UDW1 63 aa6.65□□□□□ -1.34
NEDD8-202ENST00000396828 NDUFA12Q9UI09 145 aa6.65□□□□□ -1.34
NEDD8-202ENST00000396828 TNXBP22105 4242 aa6.65□□□□□ -1.35
NEDD8-202ENST00000396828 PANO1I0J062 215 aa6.64□□□□□ -1.35
NEDD8-202ENST00000396828 NDUFA1O15239 70 aa6.64□□□□□ -1.35
NEDD8-202ENST00000396828 DLEU1O43261 78 aa6.64□□□□□ -1.35
NEDD8-202ENST00000396828 TSPEAR-AS2P59090 65 aa6.64□□□□□ -1.35
NEDD8-202ENST00000396828 SCGB1D4Q6XE38 83 aa6.64□□□□□ -1.35
NEDD8-202ENST00000396828 BOD1L2Q8IYS8 172 aa6.64□□□□□ -1.35
NEDD8-202ENST00000396828 PRO1933Q9H354 126 aa6.64□□□□□ -1.35
NEDD8-202ENST00000396828 GVQW2A0A096LPI5 108 aaPredicted RBP6.63□□□□□ -1.35
NEDD8-202ENST00000396828 TMEM238LA0A1B0GVL6 79 aa6.63□□□□□ -1.35
NEDD8-202ENST00000396828 USP17L23D6RBM5 183 aa6.63□□□□□ -1.35
NEDD8-202ENST00000396828 F8WDY8 70 aa6.63□□□□□ -1.35
NEDD8-202ENST00000396828 HERV-K104P63124 156 aa6.63□□□□□ -1.35
NEDD8-202ENST00000396828 C14orf177Q52M58 125 aa6.63□□□□□ -1.35
NEDD8-202ENST00000396828 C15orf56Q8N910 161 aa6.63□□□□□ -1.35
NEDD8-202ENST00000396828 MIEN1Q9BRT3 115 aa6.63□□□□□ -1.35
NEDD8-202ENST00000396828 TTTY13Q9BZ97 58 aa6.63□□□□□ -1.35
NEDD8-202ENST00000396828 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.63□□□□□ -1.35
NEDD8-202ENST00000396828 LINC00587B1AMM8 73 aa6.62□□□□□ -1.35
NEDD8-202ENST00000396828 KIAA0087Q14695 138 aa6.62□□□□□ -1.35
NEDD8-202ENST00000396828 HIGD2BQ4VC39 106 aa6.62□□□□□ -1.35
NEDD8-202ENST00000396828 C2orf48Q96LS8 159 aa6.62□□□□□ -1.35
NEDD8-202ENST00000396828 OXTP01178 125 aa6.61□□□□□ -1.35
NEDD8-202ENST00000396828 CIRBPQ14011 172 aaKnown RBP6.61□□□□□ -1.35
NEDD8-202ENST00000396828 SERTAD4-AS1Q5TG53 156 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 185.5 ms