RNA–Protein interactions for RNA: ENST00000396578.7

COL4A3-202, Transcript of collagen type IV alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A3, Length 8,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-202ENST00000396578 Q8N6K4 173 aa10.12□□□□□ -0.79
COL4A3-202ENST00000396578 PCOTHQ58A44 107 aa10.12□□□□□ -0.79
COL4A3-202ENST00000396578 PRR3P79522 188 aaKnown RBP10.11□□□□□ -0.79
COL4A3-202ENST00000396578 C18orf65Q6ZTR6 163 aa10.11□□□□□ -0.79
COL4A3-202ENST00000396578 MYO9AB2RTY4 2548 aa10.11□□□□□ -0.79
COL4A3-202ENST00000396578 LRRK2Q5S007 2527 aa10.1□□□□□ -0.79
COL4A3-202ENST00000396578 IGLV1-40P01703 118 aa10.1□□□□□ -0.79
COL4A3-202ENST00000396578 LY6G6CO95867 125 aa10.1□□□□□ -0.79
COL4A3-202ENST00000396578 hDV103S1A0JD37 113 aa10.1□□□□□ -0.79
COL4A3-202ENST00000396578 Q9BRP9 147 aa10.09□□□□□ -0.79
COL4A3-202ENST00000396578 HCG22E2RYF7 251 aa10.09□□□□□ -0.79
COL4A3-202ENST00000396578 TMEM254Q8TBM7 123 aa10.09□□□□□ -0.79
COL4A3-202ENST00000396578 RETNLBQ9BQ08 111 aa10.09□□□□□ -0.79
COL4A3-202ENST00000396578 LIMD2Q9BT23 127 aa10.08□□□□□ -0.8
COL4A3-202ENST00000396578 SPINK1P00995 79 aa10.08□□□□□ -0.8
COL4A3-202ENST00000396578 ADAMTSL4-AS1Q5T5F5 129 aa10.08□□□□□ -0.8
COL4A3-202ENST00000396578 C6orf223Q8N319 242 aa10.07□□□□□ -0.8
COL4A3-202ENST00000396578 TSPEAR-AS2P59090 65 aa10.07□□□□□ -0.8
COL4A3-202ENST00000396578 CXCL6P80162 114 aa10.07□□□□□ -0.8
COL4A3-202ENST00000396578 CHCHD7Q9BUK0 85 aa10.07□□□□□ -0.8
COL4A3-202ENST00000396578 LINC01006Q8NI28 216 aa10.06□□□□□ -0.8
COL4A3-202ENST00000396578 MUC22E2RYF6 1773 aaPredicted RBP10.06□□□□□ -0.8
COL4A3-202ENST00000396578 F8WDY8 70 aa10.05□□□□□ -0.8
COL4A3-202ENST00000396578 LINC00310P59036 64 aa10.05□□□□□ -0.8
COL4A3-202ENST00000396578 COL27A1Q8IZC6 1860 aaPredicted RBP10.05□□□□□ -0.8
COL4A3-202ENST00000396578 SBSPONQ8IVN8 264 aa10.05□□□□□ -0.8
COL4A3-202ENST00000396578 AMELXQ99217 191 aa10.04□□□□□ -0.8
COL4A3-202ENST00000396578 LY6G6DO95868 133 aa10.04□□□□□ -0.8
COL4A3-202ENST00000396578 URB1-AS1Q96HZ7 61 aa10.04□□□□□ -0.8
COL4A3-202ENST00000396578 PRO0628Q9UI54 55 aa10.04□□□□□ -0.8
COL4A3-202ENST00000396578 PIEZO2Q9H5I5 2752 aa10.03□□□□□ -0.8
COL4A3-202ENST00000396578 SERTAD4-AS1Q5TG53 156 aa10.03□□□□□ -0.8
COL4A3-202ENST00000396578 TTC28Q96AY4 2481 aa10.03□□□□□ -0.8
COL4A3-202ENST00000396578 A0A087WSZ3 146 aa10.03□□□□□ -0.8
COL4A3-202ENST00000396578 DEFB116Q30KQ4 102 aa10.02□□□□□ -0.8
COL4A3-202ENST00000396578 NUPR2A6NF83 97 aa10.02□□□□□ -0.81
COL4A3-202ENST00000396578 IGLV4-60A0A075B6I1 120 aa10.02□□□□□ -0.81
COL4A3-202ENST00000396578 IGLV5-52A0A0A0MRZ9 124 aa10.02□□□□□ -0.81
COL4A3-202ENST00000396578 LINC00846Q9NV44 126 aa10.01□□□□□ -0.81
COL4A3-202ENST00000396578 SPAG11AQ6PDA7 123 aa10.01□□□□□ -0.81
COL4A3-202ENST00000396578 C1orf64Q8NEQ6 169 aa10.01□□□□□ -0.81
COL4A3-202ENST00000396578 LINC01556Q5JQF7 62 aa10□□□□□ -0.81
COL4A3-202ENST00000396578 ZFYVE26Q68DK2 2539 aa9.98□□□□□ -0.81
COL4A3-202ENST00000396578 C7orf65Q6ZTY9 151 aa9.98□□□□□ -0.81
COL4A3-202ENST00000396578 A0A1B0GU69 56 aa9.98□□□□□ -0.81
COL4A3-202ENST00000396578 A0A1B0GUV1 79 aa9.98□□□□□ -0.81
COL4A3-202ENST00000396578 FHL2Q14192 279 aa9.98□□□□□ -0.81
COL4A3-202ENST00000396578 LINC01561Q8N1V8 128 aa9.97□□□□□ -0.81
COL4A3-202ENST00000396578 ZNF580Q9UK33 172 aa9.97□□□□□ -0.81
COL4A3-202ENST00000396578 C2orf48Q96LS8 159 aa9.96□□□□□ -0.81
COL4A3-202ENST00000396578 ODF3L2Q3SX64 289 aa9.95□□□□□ -0.82
COL4A3-202ENST00000396578 A8MTW9 85 aa9.95□□□□□ -0.82
COL4A3-202ENST00000396578 EDN2P20800 178 aa9.94□□□□□ -0.82
COL4A3-202ENST00000396578 FN1P02751 2386 aaKnown RBP9.94□□□□□ -0.82
COL4A3-202ENST00000396578 VPREB1P12018 145 aa9.94□□□□□ -0.82
COL4A3-202ENST00000396578 COX8CQ7Z4L0 72 aa9.94□□□□□ -0.82
COL4A3-202ENST00000396578 ACYP2P14621 99 aa9.93□□□□□ -0.82
COL4A3-202ENST00000396578 Q9UF83 564 aa9.93□□□□□ -0.82
COL4A3-202ENST00000396578 NAV2Q8IVL1 2488 aa9.93□□□□□ -0.82
COL4A3-202ENST00000396578 CDIP1Q9H305 208 aa9.93□□□□□ -0.82
COL4A3-202ENST00000396578 TP53AIP1Q9HCN2 124 aa9.93□□□□□ -0.82
COL4A3-202ENST00000396578 OXLD1Q5BKU9 147 aa9.93□□□□□ -0.82
COL4A3-202ENST00000396578 Q6ZTC4 211 aa9.93□□□□□ -0.82
COL4A3-202ENST00000396578 IGKV2D-30A0A075B6S6 120 aa9.93□□□□□ -0.82
COL4A3-202ENST00000396578 IGKV2-30P06310 120 aa9.93□□□□□ -0.82
COL4A3-202ENST00000396578 SMIM29Q86T20 159 aa9.92□□□□□ -0.82
COL4A3-202ENST00000396578 PRLHP81277 87 aa9.92□□□□□ -0.82
COL4A3-202ENST00000396578 LINC00337Q8N6G1 96 aa9.91□□□□□ -0.82
COL4A3-202ENST00000396578 IGLV1-51P01701 117 aa9.91□□□□□ -0.82
COL4A3-202ENST00000396578 A0A096LNJ9 63 aa9.9□□□□□ -0.82
COL4A3-202ENST00000396578 Q6ZSN1 163 aa9.89□□□□□ -0.83
COL4A3-202ENST00000396578 Q8N2B8 174 aa9.88□□□□□ -0.83
COL4A3-202ENST00000396578 C4orf26Q17RF5 130 aa9.88□□□□□ -0.83
COL4A3-202ENST00000396578 RPS28P62857 69 aaKnown RBP9.88□□□□□ -0.83
COL4A3-202ENST00000396578 LYPD5Q6UWN5 251 aa9.86□□□□□ -0.83
COL4A3-202ENST00000396578 BCE1O60756 84 aa9.86□□□□□ -0.83
COL4A3-202ENST00000396578 BRI3O95415 125 aa9.86□□□□□ -0.83
COL4A3-202ENST00000396578 FSHBP01225 129 aa9.86□□□□□ -0.83
COL4A3-202ENST00000396578 KIAA0087Q14695 138 aa9.86□□□□□ -0.83
COL4A3-202ENST00000396578 C6orf48Q9UBA6 75 aa9.86□□□□□ -0.83
COL4A3-202ENST00000396578 Q6ZRU5 148 aa9.85□□□□□ -0.83
COL4A3-202ENST00000396578 SPATA3Q8NHX4 192 aa9.85□□□□□ -0.83
COL4A3-202ENST00000396578 C8orf87E5RJ46 101 aa9.84□□□□□ -0.83
COL4A3-202ENST00000396578 TLN2Q9Y4G6 2542 aa9.84□□□□□ -0.83
COL4A3-202ENST00000396578 SMCR5Q8TEV8 140 aa9.84□□□□□ -0.83
COL4A3-202ENST00000396578 C22orf24Q9Y442 160 aa9.83□□□□□ -0.84
COL4A3-202ENST00000396578 LINC01546A6NGU7 62 aa9.83□□□□□ -0.84
COL4A3-202ENST00000396578 PLA2G2AP14555 144 aa9.83□□□□□ -0.84
COL4A3-202ENST00000396578 A0A1B0GW54 56 aa9.82□□□□□ -0.84
COL4A3-202ENST00000396578 C1orf134Q5TEV5 83 aa9.81□□□□□ -0.84
COL4A3-202ENST00000396578 AVPP01185 164 aa9.81□□□□□ -0.84
COL4A3-202ENST00000396578 SPINT4Q6UDR6 99 aa9.81□□□□□ -0.84
COL4A3-202ENST00000396578 ATP11AUNQ6ZP68 121 aa9.81□□□□□ -0.84
COL4A3-202ENST00000396578 ABCA12Q86UK0 2595 aa9.8□□□□□ -0.84
COL4A3-202ENST00000396578 H3BPC8 53 aa9.8□□□□□ -0.84
COL4A3-202ENST00000396578 PLA2G1BP04054 148 aaKnown RBP9.79□□□□□ -0.84
COL4A3-202ENST00000396578 IGLV5-39A0A0G2JS06 123 aa9.79□□□□□ -0.84
COL4A3-202ENST00000396578 C16orf95Q9H693 158 aa9.78□□□□□ -0.84
COL4A3-202ENST00000396578 MOBPQ13875 183 aa9.77□□□□□ -0.84
COL4A3-202ENST00000396578 SRCAPQ6ZRS2 3230 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms