RNA–Protein interactions for RNA: ENST00000396354.5

NDE1-201, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,221 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-201ENST00000396354 CRPP02741 224 aa6.57□□□□□ -1.36
NDE1-201ENST00000396354 SPANXDQ9BXN6 97 aa6.57□□□□□ -1.36
NDE1-201ENST00000396354 SND1-IT1Q9HBX3 110 aa6.57□□□□□ -1.36
NDE1-201ENST00000396354 SPANXCQ9NY87 97 aa6.57□□□□□ -1.36
NDE1-201ENST00000396354 M0QXV9 152 aa6.56□□□□□ -1.36
NDE1-201ENST00000396354 DNAL4O96015 105 aa6.56□□□□□ -1.36
NDE1-201ENST00000396354 LCE2CQ5TA81 110 aa6.56□□□□□ -1.36
NDE1-201ENST00000396354 CDC42SE2Q9NRR3 84 aa6.56□□□□□ -1.36
NDE1-201ENST00000396354 C6orf226Q5I0X4 101 aa6.56□□□□□ -1.36
NDE1-201ENST00000396354 C14orf132Q9NPU4 83 aa6.56□□□□□ -1.36
NDE1-201ENST00000396354 IGKV3D-7A0A0C4DH55 119 aa6.55□□□□□ -1.36
NDE1-201ENST00000396354 ZNF561-AS1K7EIQ3 104 aa6.55□□□□□ -1.36
NDE1-201ENST00000396354 C9orf129Q5T035 196 aaKnown RBP6.55□□□□□ -1.36
NDE1-201ENST00000396354 LINC00337Q8N6G1 96 aa6.55□□□□□ -1.36
NDE1-201ENST00000396354 PPDPFQ9H3Y8 114 aa6.55□□□□□ -1.36
NDE1-201ENST00000396354 A0A087WYN8 130 aa6.55□□□□□ -1.36
NDE1-201ENST00000396354 C9orf116Q5BN46 136 aaPredicted RBP6.54□□□□□ -1.36
NDE1-201ENST00000396354 LECT2O14960 151 aa6.54□□□□□ -1.36
NDE1-201ENST00000396354 COX7B2Q8TF08 81 aa6.54□□□□□ -1.36
NDE1-201ENST00000396354 C19orf73Q9NVV2 129 aa6.54□□□□□ -1.36
NDE1-201ENST00000396354 COL6A5A8TX70 2615 aa6.54□□□□□ -1.36
NDE1-201ENST00000396354 GYPEP15421 78 aa6.54□□□□□ -1.36
NDE1-201ENST00000396354 DNAJC30Q96LL9 226 aa6.54□□□□□ -1.36
NDE1-201ENST00000396354 COX7A2LO14548 114 aa6.53□□□□□ -1.36
NDE1-201ENST00000396354 NCR3O14931 201 aa6.53□□□□□ -1.36
NDE1-201ENST00000396354 HILS1P60008 231 aa6.53□□□□□ -1.36
NDE1-201ENST00000396354 IL17DQ8TAD2 202 aa6.53□□□□□ -1.36
NDE1-201ENST00000396354 TIRAPP58753 221 aa6.53□□□□□ -1.36
NDE1-201ENST00000396354 BEAN1Q3B7T3 259 aa6.53□□□□□ -1.36
NDE1-201ENST00000396354 SDIM1Q6ZPB5 146 aa6.53□□□□□ -1.36
NDE1-201ENST00000396354 SMCR5Q8TEV8 140 aa6.53□□□□□ -1.36
NDE1-201ENST00000396354 H3BT86 120 aa6.52□□□□□ -1.37
NDE1-201ENST00000396354 C16orf95Q9H693 158 aa6.52□□□□□ -1.37
NDE1-201ENST00000396354 PLAC8L1A1L4L8 177 aa6.52□□□□□ -1.37
NDE1-201ENST00000396354 DEFB135Q30KP9 77 aa6.52□□□□□ -1.37
NDE1-201ENST00000396354 SMIM11BQ8TCY0 68 aa6.52□□□□□ -1.37
NDE1-201ENST00000396354 F5H768 121 aa6.51□□□□□ -1.37
NDE1-201ENST00000396354 CCL18P55774 89 aa6.51□□□□□ -1.37
NDE1-201ENST00000396354 A0A087WVE0 104 aa6.51□□□□□ -1.37
NDE1-201ENST00000396354 IGLV5-39A0A0G2JS06 123 aa6.51□□□□□ -1.37
NDE1-201ENST00000396354 WFDC9Q8NEX5 89 aa6.51□□□□□ -1.37
NDE1-201ENST00000396354 EDA2RQ9HAV5 297 aa6.51□□□□□ -1.37
NDE1-201ENST00000396354 KLK5Q9Y337 293 aaPredicted RBP6.51□□□□□ -1.37
NDE1-201ENST00000396354 IGLV1-51P01701 117 aa6.5□□□□□ -1.37
NDE1-201ENST00000396354 LCE2AQ5TA79 106 aaPredicted RBP6.5□□□□□ -1.37
NDE1-201ENST00000396354 IGKV2-28A0A075B6P5 120 aa6.5□□□□□ -1.37
NDE1-201ENST00000396354 TRBV6-8A0A0A6YYG3 113 aa6.5□□□□□ -1.37
NDE1-201ENST00000396354 IGKV2D-28P01615 120 aa6.5□□□□□ -1.37
NDE1-201ENST00000396354 ANGP03950 147 aaKnown RBP6.5□□□□□ -1.37
NDE1-201ENST00000396354 X6R8D5 127 aa6.5□□□□□ -1.37
NDE1-201ENST00000396354 LINC00269Q8N2A0 174 aa6.49□□□□□ -1.37
NDE1-201ENST00000396354 TRAV25A0A0B4J276 109 aa6.49□□□□□ -1.37
NDE1-201ENST00000396354 HIST1H4AP62805 103 aaKnown RBP6.49□□□□□ -1.37
NDE1-201ENST00000396354 CSNK1G2-AS1Q8NCQ2 148 aa6.48□□□□□ -1.37
NDE1-201ENST00000396354 IGLV5-45A0A087WSX0 123 aa6.48□□□□□ -1.37
NDE1-201ENST00000396354 MRPL23Q16540 153 aaKnown RBP6.48□□□□□ -1.37
NDE1-201ENST00000396354 C16orf74Q96GX8 76 aa6.48□□□□□ -1.37
NDE1-201ENST00000396354 TRBV10-1A0A0K0K1A3 114 aa6.48□□□□□ -1.37
NDE1-201ENST00000396354 MALP21145 153 aa6.48□□□□□ -1.37
NDE1-201ENST00000396354 CSDC2Q9Y534 153 aaKnown RBP6.48□□□□□ -1.37
NDE1-201ENST00000396354 FHL2Q14192 279 aa6.47□□□□□ -1.37
NDE1-201ENST00000396354 C5orf47Q569G3 176 aa6.47□□□□□ -1.37
NDE1-201ENST00000396354 DNAH3Q8TD57 4116 aa6.47□□□□□ -1.37
NDE1-201ENST00000396354 FAM222AQ5U5X8 452 aa6.46□□□□□ -1.37
NDE1-201ENST00000396354 TENM3Q9P273 2699 aa6.46□□□□□ -1.37
NDE1-201ENST00000396354 LINC00959A0A1B0GUT2 108 aa6.46□□□□□ -1.38
NDE1-201ENST00000396354 TIMM17BO60830 172 aa6.46□□□□□ -1.38
NDE1-201ENST00000396354 MGAM2Q2M2H8 2515 aa6.46□□□□□ -1.38
NDE1-201ENST00000396354 TRAV13-2A0A0B4J235 113 aa6.46□□□□□ -1.38
NDE1-201ENST00000396354 C9orf153Q5TBE3 101 aa6.46□□□□□ -1.38
NDE1-201ENST00000396354 C6orf223Q8N319 242 aa6.46□□□□□ -1.38
NDE1-201ENST00000396354 IGHV3OR16-9A0A0B4J2B5 98 aa6.45□□□□□ -1.38
NDE1-201ENST00000396354 CXCL5P42830 114 aa6.44□□□□□ -1.38
NDE1-201ENST00000396354 COPS9Q8WXC6 57 aa6.44□□□□□ -1.38
NDE1-201ENST00000396354 SS18Q15532 418 aa6.44□□□□□ -1.38
NDE1-201ENST00000396354 XAGE1AQ9HD64 81 aa6.44□□□□□ -1.38
NDE1-201ENST00000396354 TRBV6-4A0A1B0GX49 114 aa6.43□□□□□ -1.38
NDE1-201ENST00000396354 H3BS24 57 aa6.43□□□□□ -1.38
NDE1-201ENST00000396354 LINC00846Q9NV44 126 aa6.43□□□□□ -1.38
NDE1-201ENST00000396354 C22orf24Q9Y442 160 aa6.42□□□□□ -1.38
NDE1-201ENST00000396354 S100A7L2Q5SY68 101 aa6.42□□□□□ -1.38
NDE1-201ENST00000396354 LOC107984640A0A0U1RRK4 108 aa6.42□□□□□ -1.38
NDE1-201ENST00000396354 KLK12Q9UKR0 248 aa6.42□□□□□ -1.38
NDE1-201ENST00000396354 TRACP01848 142 aa6.41□□□□□ -1.38
NDE1-201ENST00000396354 Q6Q795 121 aa6.41□□□□□ -1.38
NDE1-201ENST00000396354 C6orf99Q4VX62 202 aa6.41□□□□□ -1.38
NDE1-201ENST00000396354 CHCHD10Q8WYQ3 142 aaPredicted RBP6.41□□□□□ -1.38
NDE1-201ENST00000396354 hADV29S1A0JD25 119 aa6.4□□□□□ -1.38
NDE1-201ENST00000396354 SMIM9A6NGZ8 99 aa6.4□□□□□ -1.38
NDE1-201ENST00000396354 RPL18AQ02543 176 aaKnown RBP6.4□□□□□ -1.38
NDE1-201ENST00000396354 KRTAP24-1Q3LI83 254 aa6.4□□□□□ -1.38
NDE1-201ENST00000396354 C10orf25Q5T742 122 aa6.4□□□□□ -1.38
NDE1-201ENST00000396354 A0A087WZ39 114 aa6.4□□□□□ -1.38
NDE1-201ENST00000396354 INAFM2P0DMQ5 153 aa6.4□□□□□ -1.38
NDE1-201ENST00000396354 UNQ6190/PRO20217Q6UXQ8 127 aa6.4□□□□□ -1.38
NDE1-201ENST00000396354 LINC00643Q86TS7 51 aa6.4□□□□□ -1.38
NDE1-201ENST00000396354 TRAV23DV6A0A075B6W5 121 aa6.4□□□□□ -1.39
NDE1-201ENST00000396354 A0A1B0GX51 115 aa6.4□□□□□ -1.39
NDE1-201ENST00000396354 RPL28P46779 137 aaKnown RBP6.4□□□□□ -1.39
NDE1-201ENST00000396354 DAD1P61803 113 aa6.4□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 198.6 ms