RNA–Protein interactions for RNA: ENST00000395963.2

CCR9-203, Transcript of C-C motif chemokine receptor 9, humanhuman

TSL 1 (best) BASIC

Gene CCR9, Length 2,512 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9-203ENST00000395963 UBE2D4Q9Y2X8 147 aa6.08□□□□□ -1.44
CCR9-203ENST00000395963 IGIPA6NJ69 53 aa6.08□□□□□ -1.44
CCR9-203ENST00000395963 CFC1BP0CG36 223 aa6.08□□□□□ -1.44
CCR9-203ENST00000395963 CFC1P0CG37 223 aa6.08□□□□□ -1.44
CCR9-203ENST00000395963 SCGB3A1Q96QR1 104 aa6.08□□□□□ -1.44
CCR9-203ENST00000395963 IGHV3-38A0A0C4DH36 116 aa6.07□□□□□ -1.44
CCR9-203ENST00000395963 NTN5Q8WTR8 489 aaPredicted RBP6.07□□□□□ -1.44
CCR9-203ENST00000395963 BAALCQ8WXS3 180 aa6.07□□□□□ -1.44
CCR9-203ENST00000395963 C11orf86A6NJI1 115 aa6.07□□□□□ -1.44
CCR9-203ENST00000395963 IGHV3-33P01772 117 aa6.07□□□□□ -1.44
CCR9-203ENST00000395963 LINC01556Q5JQF7 62 aa6.07□□□□□ -1.44
CCR9-203ENST00000395963 CHCHD5Q9BSY4 110 aa6.07□□□□□ -1.44
CCR9-203ENST00000395963 COX6CP09669 75 aa6.06□□□□□ -1.44
CCR9-203ENST00000395963 DNAH10OSP0CZ25 163 aa6.06□□□□□ -1.44
CCR9-203ENST00000395963 C9orf153Q5TBE3 101 aa6.06□□□□□ -1.44
CCR9-203ENST00000395963 DGAT2L7PQ6IED9 249 aa6.06□□□□□ -1.44
CCR9-203ENST00000395963 LOC107984640A0A0U1RRK4 108 aa6.06□□□□□ -1.44
CCR9-203ENST00000395963 ESRGQ1W209 222 aa6.06□□□□□ -1.44
CCR9-203ENST00000395963 FAM19A3Q7Z5A8 133 aa6.06□□□□□ -1.44
CCR9-203ENST00000395963 PLEKHB2Q96CS7 222 aa6.06□□□□□ -1.44
CCR9-203ENST00000395963 AMELXQ99217 191 aa6.05□□□□□ -1.44
CCR9-203ENST00000395963 CRYGAP11844 174 aa6.05□□□□□ -1.44
CCR9-203ENST00000395963 PMVKQ15126 192 aa6.05□□□□□ -1.44
CCR9-203ENST00000395963 LINC00643Q86TS7 51 aa6.05□□□□□ -1.44
CCR9-203ENST00000395963 IGLV4-3A0A075B6K6 122 aa6.04□□□□□ -1.44
CCR9-203ENST00000395963 CDC42SE2Q9NRR3 84 aa6.04□□□□□ -1.44
CCR9-203ENST00000395963 NBEAL2Q6ZNJ1 2754 aa6.04□□□□□ -1.44
CCR9-203ENST00000395963 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.04□□□□□ -1.44
CCR9-203ENST00000395963 IGKV2-29A2NJV5 120 aaPredicted RBP6.04□□□□□ -1.44
CCR9-203ENST00000395963 TMEM258P61165 79 aa6.04□□□□□ -1.44
CCR9-203ENST00000395963 LINC00588Q9Y4M8 146 aa6.04□□□□□ -1.44
CCR9-203ENST00000395963 PRKDCP78527 4128 aaKnown RBP6.04□□□□□ -1.44
CCR9-203ENST00000395963 RPL39P62891 51 aaKnown RBP6.03□□□□□ -1.44
CCR9-203ENST00000395963 C2orf82Q6UX34 121 aa6.03□□□□□ -1.44
CCR9-203ENST00000395963 TENM3Q9P273 2699 aa6.03□□□□□ -1.44
CCR9-203ENST00000395963 FBN3Q75N90 2809 aa6.03□□□□□ -1.44
CCR9-203ENST00000395963 TEX49A0A1B0GTD5 131 aa6.03□□□□□ -1.44
CCR9-203ENST00000395963 ATOX1O00244 68 aa6.03□□□□□ -1.44
CCR9-203ENST00000395963 COX7CP15954 63 aa6.03□□□□□ -1.44
CCR9-203ENST00000395963 UBE2DNLQ8IWF7 75 aa6.03□□□□□ -1.44
CCR9-203ENST00000395963 PRR34Q9NV39 138 aa6.03□□□□□ -1.44
CCR9-203ENST00000395963 HERVK_113P63121 156 aa6.02□□□□□ -1.45
CCR9-203ENST00000395963 LINC01561Q8N1V8 128 aa6.02□□□□□ -1.45
CCR9-203ENST00000395963 LGALS3P17931 250 aaKnown RBP6.02□□□□□ -1.45
CCR9-203ENST00000395963 MIAQ16674 131 aa6.02□□□□□ -1.45
CCR9-203ENST00000395963 SDIM1Q6ZPB5 146 aa6.02□□□□□ -1.45
CCR9-203ENST00000395963 FAM19A5Q7Z5A7 132 aaPredicted RBP6.02□□□□□ -1.45
CCR9-203ENST00000395963 RMI2Q96E14 147 aa6.02□□□□□ -1.45
CCR9-203ENST00000395963 CASC10Q5T4H9 136 aa6.01□□□□□ -1.45
CCR9-203ENST00000395963 FAM236AA0A1B0GUQ0 79 aa6.01□□□□□ -1.45
CCR9-203ENST00000395963 FAM236BA0A1B0GV22 79 aa6.01□□□□□ -1.45
CCR9-203ENST00000395963 LEPROTO15243 131 aa6.01□□□□□ -1.45
CCR9-203ENST00000395963 DYNC2H1Q8NCM8 4307 aaKnown RBP6.01□□□□□ -1.45
CCR9-203ENST00000395963 TRAV8-3A0A0A6YYJ7 113 aa6□□□□□ -1.45
CCR9-203ENST00000395963 TINCRA0A1B0GVN0 87 aa6□□□□□ -1.45
CCR9-203ENST00000395963 J3QQQ9 107 aa6□□□□□ -1.45
CCR9-203ENST00000395963 CRPP02741 224 aa6□□□□□ -1.45
CCR9-203ENST00000395963 SS18Q15532 418 aa6□□□□□ -1.45
CCR9-203ENST00000395963 WFDC10BQ8IUB3 73 aa6□□□□□ -1.45
CCR9-203ENST00000395963 A4D1N5 150 aa6□□□□□ -1.45
CCR9-203ENST00000395963 IBA57-AS1B1ANH7 110 aa6□□□□□ -1.45
CCR9-203ENST00000395963 GAGE2AQ6NT46 116 aa6□□□□□ -1.45
CCR9-203ENST00000395963 FAM104AQ969W3 186 aa6□□□□□ -1.45
CCR9-203ENST00000395963 Q9H8V8 135 aa6□□□□□ -1.45
CCR9-203ENST00000395963 COL7A1Q02388 2944 aa6□□□□□ -1.45
CCR9-203ENST00000395963 IGLV4-69A0A075B6H9 119 aa5.99□□□□□ -1.45
CCR9-203ENST00000395963 IGLV5-45A0A087WSX0 123 aa5.99□□□□□ -1.45
CCR9-203ENST00000395963 EIF4EBP3O60516 100 aaPredicted RBP5.99□□□□□ -1.45
CCR9-203ENST00000395963 Q1RN00 199 aa5.99□□□□□ -1.45
CCR9-203ENST00000395963 LST1O00453 97 aa5.99□□□□□ -1.45
CCR9-203ENST00000395963 ANGP03950 147 aaKnown RBP5.99□□□□□ -1.45
CCR9-203ENST00000395963 REG3AQ06141 175 aa5.99□□□□□ -1.45
CCR9-203ENST00000395963 C5orf38Q86SI9 138 aa5.99□□□□□ -1.45
CCR9-203ENST00000395963 DAND5Q8N907 189 aa5.99□□□□□ -1.45
CCR9-203ENST00000395963 IGLV4-60A0A075B6I1 120 aa5.98□□□□□ -1.45
CCR9-203ENST00000395963 NDUFC2-KCTD14E9PQ53 114 aa5.98□□□□□ -1.45
CCR9-203ENST00000395963 HIST1H4AP62805 103 aaKnown RBP5.98□□□□□ -1.45
CCR9-203ENST00000395963 LINC00959A0A1B0GUT2 108 aa5.98□□□□□ -1.45
CCR9-203ENST00000395963 TMEM223A0PJW6 202 aa5.97□□□□□ -1.45
CCR9-203ENST00000395963 H7C2G1 150 aa5.97□□□□□ -1.45
CCR9-203ENST00000395963 TRACP01848 142 aa5.97□□□□□ -1.45
CCR9-203ENST00000395963 DNAH7Q8WXX0 4024 aa5.97□□□□□ -1.45
CCR9-203ENST00000395963 A0A0J9YXY3 114 aa5.97□□□□□ -1.45
CCR9-203ENST00000395963 INAFM2P0DMQ5 153 aa5.97□□□□□ -1.45
CCR9-203ENST00000395963 CD164L2Q6UWJ8 174 aa5.97□□□□□ -1.45
CCR9-203ENST00000395963 COPS9Q8WXC6 57 aa5.97□□□□□ -1.45
CCR9-203ENST00000395963 STAB2Q8WWQ8 2551 aa5.97□□□□□ -1.45
CCR9-203ENST00000395963 TRIAP1O43715 76 aa5.96□□□□□ -1.45
CCR9-203ENST00000395963 TIMM17BO60830 172 aa5.96□□□□□ -1.45
CCR9-203ENST00000395963 LINC00269Q8N2A0 174 aa5.96□□□□□ -1.45
CCR9-203ENST00000395963 LINC00476Q8WZB0 136 aa5.96□□□□□ -1.45
CCR9-203ENST00000395963 F8WDY8 70 aa5.96□□□□□ -1.46
CCR9-203ENST00000395963 TSPEAR-AS2P59090 65 aa5.96□□□□□ -1.46
CCR9-203ENST00000395963 LINC00242Q5T6M2 205 aa5.96□□□□□ -1.46
CCR9-203ENST00000395963 KLK12Q9UKR0 248 aa5.96□□□□□ -1.46
CCR9-203ENST00000395963 NBDYA0A0U1RRE5 68 aa5.95□□□□□ -1.46
CCR9-203ENST00000395963 IGHV3-30-3P0DP02 117 aa5.95□□□□□ -1.46
CCR9-203ENST00000395963 DEFB104AQ8WTQ1 72 aa5.95□□□□□ -1.46
CCR9-203ENST00000395963 C1orf43Q9BWL3 253 aa5.95□□□□□ -1.46
CCR9-203ENST00000395963 ENHOQ6UWT2 76 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms