RNA–Protein interactions for RNA: ENST00000395898.3

VPS13C-204, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 11,012 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-204ENST00000395898 ODF3L2Q3SX64 289 aa3.94□□□□□ -1.78
VPS13C-204ENST00000395898 A6NED7 52 aa3.93□□□□□ -1.78
VPS13C-204ENST00000395898 LINC01561Q8N1V8 128 aa3.93□□□□□ -1.78
VPS13C-204ENST00000395898 LINC00526Q96FQ7 95 aa3.93□□□□□ -1.78
VPS13C-204ENST00000395898 PRM2P04554 102 aa3.93□□□□□ -1.78
VPS13C-204ENST00000395898 HRCT1Q6UXD1 115 aa3.93□□□□□ -1.78
VPS13C-204ENST00000395898 CDSNQ15517 529 aa3.93□□□□□ -1.78
VPS13C-204ENST00000395898 ANKRD11Q6UB99 2663 aaPredicted RBP3.93□□□□□ -1.78
VPS13C-204ENST00000395898 TRAV7A0A075B6U4 112 aa3.93□□□□□ -1.78
VPS13C-204ENST00000395898 AVPP01185 164 aa3.93□□□□□ -1.78
VPS13C-204ENST00000395898 SNURFQ9Y675 71 aa3.93□□□□□ -1.78
VPS13C-204ENST00000395898 Q6JHZ5 121 aa3.92□□□□□ -1.78
VPS13C-204ENST00000395898 AMELXQ99217 191 aa3.92□□□□□ -1.78
VPS13C-204ENST00000395898 FHL2Q14192 279 aa3.92□□□□□ -1.78
VPS13C-204ENST00000395898 COX6A2Q02221 97 aa3.92□□□□□ -1.78
VPS13C-204ENST00000395898 C1orf137Q5JT78 98 aa3.92□□□□□ -1.78
VPS13C-204ENST00000395898 UNQ6190/PRO20217Q6UXQ8 127 aa3.92□□□□□ -1.78
VPS13C-204ENST00000395898 GAS8-AS1O95177 125 aa3.92□□□□□ -1.78
VPS13C-204ENST00000395898 WFDC13Q8IUB5 93 aa3.92□□□□□ -1.78
VPS13C-204ENST00000395898 FAM30AQ9NZY2 134 aa3.91□□□□□ -1.78
VPS13C-204ENST00000395898 C6orf223Q8N319 242 aa3.91□□□□□ -1.78
VPS13C-204ENST00000395898 IGLV5-52A0A0A0MRZ9 124 aa3.91□□□□□ -1.78
VPS13C-204ENST00000395898 BEAN1Q3B7T3 259 aa3.91□□□□□ -1.78
VPS13C-204ENST00000395898 CIRBP-AS1Q8TBR5 109 aa3.91□□□□□ -1.78
VPS13C-204ENST00000395898 NHLRC4P0CG21 123 aaPredicted RBP3.91□□□□□ -1.78
VPS13C-204ENST00000395898 TRBV10-3A0A0K0K1G6 114 aa3.91□□□□□ -1.78
VPS13C-204ENST00000395898 Q6ZVQ6 151 aa3.91□□□□□ -1.78
VPS13C-204ENST00000395898 NCOR2Q9Y618 2525 aa3.91□□□□□ -1.78
VPS13C-204ENST00000395898 C2orf48Q96LS8 159 aa3.91□□□□□ -1.78
VPS13C-204ENST00000395898 PRYO14603 147 aa3.91□□□□□ -1.78
VPS13C-204ENST00000395898 Q6ZTC4 211 aa3.9□□□□□ -1.78
VPS13C-204ENST00000395898 IGLV4-60A0A075B6I1 120 aa3.9□□□□□ -1.79
VPS13C-204ENST00000395898 SMR3AQ99954 134 aa3.9□□□□□ -1.79
VPS13C-204ENST00000395898 ESRGQ1W209 222 aa3.9□□□□□ -1.79
VPS13C-204ENST00000395898 LINC00575Q6W349 94 aa3.89□□□□□ -1.79
VPS13C-204ENST00000395898 LINC01547P58512 204 aaPredicted RBP3.89□□□□□ -1.79
VPS13C-204ENST00000395898 LINC00694P0DN24 101 aa3.89□□□□□ -1.79
VPS13C-204ENST00000395898 XGP55808 180 aa3.89□□□□□ -1.79
VPS13C-204ENST00000395898 C9orf116Q5BN46 136 aaPredicted RBP3.89□□□□□ -1.79
VPS13C-204ENST00000395898 URB1-AS1Q96HZ7 61 aa3.88□□□□□ -1.79
VPS13C-204ENST00000395898 USP9XQ93008 2570 aaPredicted RBP3.88□□□□□ -1.79
VPS13C-204ENST00000395898 EDN2P20800 178 aa3.88□□□□□ -1.79
VPS13C-204ENST00000395898 LYPD5Q6UWN5 251 aa3.88□□□□□ -1.79
VPS13C-204ENST00000395898 A0A087WYN8 130 aa3.88□□□□□ -1.79
VPS13C-204ENST00000395898 SMIM26A0A096LP01 95 aa3.88□□□□□ -1.79
VPS13C-204ENST00000395898 FSHBP01225 129 aa3.88□□□□□ -1.79
VPS13C-204ENST00000395898 COL4A2P08572 1712 aa3.88□□□□□ -1.79
VPS13C-204ENST00000395898 LINC00208Q96KT6 92 aa3.87□□□□□ -1.79
VPS13C-204ENST00000395898 Q9BRP9 147 aa3.87□□□□□ -1.79
VPS13C-204ENST00000395898 TRBV7-6A0A0J9YX20 115 aa3.87□□□□□ -1.79
VPS13C-204ENST00000395898 PRR3P79522 188 aaKnown RBP3.87□□□□□ -1.79
VPS13C-204ENST00000395898 LIMD2Q9BT23 127 aa3.87□□□□□ -1.79
VPS13C-204ENST00000395898 Q8N3U1 123 aa3.87□□□□□ -1.79
VPS13C-204ENST00000395898 ADAMTSL4-AS1Q5T5F5 129 aa3.87□□□□□ -1.79
VPS13C-204ENST00000395898 A0A0U1RQV1 116 aa3.87□□□□□ -1.79
VPS13C-204ENST00000395898 JMJD1CQ15652 2540 aa3.87□□□□□ -1.79
VPS13C-204ENST00000395898 PRRC2CQ9Y520 2896 aaKnown RBP3.87□□□□□ -1.79
VPS13C-204ENST00000395898 CXCL6P80162 114 aa3.87□□□□□ -1.79
VPS13C-204ENST00000395898 C1orf134Q5TEV5 83 aa3.87□□□□□ -1.79
VPS13C-204ENST00000395898 SPTBN4Q9H254 2564 aa3.86□□□□□ -1.79
VPS13C-204ENST00000395898 LINC00310P59036 64 aa3.86□□□□□ -1.79
VPS13C-204ENST00000395898 LINC01556Q5JQF7 62 aa3.86□□□□□ -1.79
VPS13C-204ENST00000395898 CCDC179H3BU77 68 aa3.86□□□□□ -1.79
VPS13C-204ENST00000395898 KRTAP10-9P60411 292 aa3.86□□□□□ -1.79
VPS13C-204ENST00000395898 Q8N2B8 174 aa3.86□□□□□ -1.79
VPS13C-204ENST00000395898 TSPEAR-AS2P59090 65 aa3.86□□□□□ -1.79
VPS13C-204ENST00000395898 SETD2Q9BYW2 2564 aaPredicted RBP3.86□□□□□ -1.79
VPS13C-204ENST00000395898 CELA1Q9UNI1 258 aa3.86□□□□□ -1.79
VPS13C-204ENST00000395898 IGHV6-1A0A0B4J1U7 121 aa3.85□□□□□ -1.79
VPS13C-204ENST00000395898 LINC01546A6NGU7 62 aa3.85□□□□□ -1.79
VPS13C-204ENST00000395898 RETNQ9HD89 108 aa3.85□□□□□ -1.79
VPS13C-204ENST00000395898 A0A1B0GW54 56 aa3.85□□□□□ -1.79
VPS13C-204ENST00000395898 hDV103S1A0JD37 113 aa3.85□□□□□ -1.79
VPS13C-204ENST00000395898 A0A1W2PPR1 153 aa3.85□□□□□ -1.79
VPS13C-204ENST00000395898 H3BNG1 76 aa3.85□□□□□ -1.79
VPS13C-204ENST00000395898 LAMA2P24043 3122 aaKnown RBP3.85□□□□□ -1.79
VPS13C-204ENST00000395898 H0Y9P7 68 aa3.85□□□□□ -1.79
VPS13C-204ENST00000395898 FHL3Q13643 280 aa3.85□□□□□ -1.79
VPS13C-204ENST00000395898 Q6ZSN1 163 aa3.84□□□□□ -1.79
VPS13C-204ENST00000395898 BPTFQ12830 3046 aa3.84□□□□□ -1.79
VPS13C-204ENST00000395898 PRR4Q16378 134 aa3.84□□□□□ -1.79
VPS13C-204ENST00000395898 MKI67P46013 3256 aaKnown RBP3.84□□□□□ -1.79
VPS13C-204ENST00000395898 A0A096LNJ9 63 aa3.84□□□□□ -1.79
VPS13C-204ENST00000395898 HCG22E2RYF7 251 aa3.84□□□□□ -1.79
VPS13C-204ENST00000395898 A0A087WSZ3 146 aa3.84□□□□□ -1.8
VPS13C-204ENST00000395898 Q6ZRU5 148 aa3.84□□□□□ -1.8
VPS13C-204ENST00000395898 FAM19A4Q96LR4 140 aa3.83□□□□□ -1.8
VPS13C-204ENST00000395898 XIRP2A4UGR9 3374 aa3.83□□□□□ -1.8
VPS13C-204ENST00000395898 USP9YO00507 2555 aaPredicted RBP3.83□□□□□ -1.8
VPS13C-204ENST00000395898 F8P00451 2351 aa3.83□□□□□ -1.8
VPS13C-204ENST00000395898 PMAIP1Q13794 54 aa3.83□□□□□ -1.8
VPS13C-204ENST00000395898 TP53AIP1Q9HCN2 124 aa3.83□□□□□ -1.8
VPS13C-204ENST00000395898 PKD1L2Q7Z442 2459 aa3.83□□□□□ -1.8
VPS13C-204ENST00000395898 TRBV7-7A0A0K0K1E9 115 aa3.83□□□□□ -1.8
VPS13C-204ENST00000395898 C11orf72Q8NBR9 251 aa3.83□□□□□ -1.8
VPS13C-204ENST00000395898 C22orf24Q9Y442 160 aa3.82□□□□□ -1.8
VPS13C-204ENST00000395898 KIF25-AS1Q9Y6Z4 181 aa3.82□□□□□ -1.8
VPS13C-204ENST00000395898 IGHV3OR16-9A0A0B4J2B5 98 aa3.82□□□□□ -1.8
VPS13C-204ENST00000395898 C1orf195Q5TG92 126 aa3.82□□□□□ -1.8
VPS13C-204ENST00000395898 LINC00337Q8N6G1 96 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms