RNA–Protein interactions for RNA: ENST00000395577.2

CDKN3-203, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-203ENST00000395577 Q6AWC8 147 aa2.29□□□□□ -2.04
CDKN3-203ENST00000395577 SPACA4Q8TDM5 124 aa2.29□□□□□ -2.04
CDKN3-203ENST00000395577 HIST1H2BHQ93079 126 aa2.29□□□□□ -2.04
CDKN3-203ENST00000395577 FAM167A-AS1Q96KT0 104 aa2.29□□□□□ -2.04
CDKN3-203ENST00000395577 MGST2Q99735 147 aa2.29□□□□□ -2.04
CDKN3-203ENST00000395577 HIST1H2BNQ99877 126 aa2.29□□□□□ -2.04
CDKN3-203ENST00000395577 HIST1H2BMQ99879 126 aa2.29□□□□□ -2.04
CDKN3-203ENST00000395577 TMEM147Q9BVK8 224 aa2.29□□□□□ -2.04
CDKN3-203ENST00000395577 TRAV5A0A0B4J249 113 aa2.28□□□□□ -2.04
CDKN3-203ENST00000395577 FAM236DA0A1B0GTK5 79 aa2.28□□□□□ -2.04
CDKN3-203ENST00000395577 GABARAPH6UMI1 98 aa2.28□□□□□ -2.04
CDKN3-203ENST00000395577 FAM236CP0DP71 79 aa2.28□□□□□ -2.04
CDKN3-203ENST00000395577 SRIP30626 198 aa2.28□□□□□ -2.04
CDKN3-203ENST00000395577 KRTAP13-4Q3LI77 160 aa2.28□□□□□ -2.04
CDKN3-203ENST00000395577 MCFD2Q8NI22 146 aa2.28□□□□□ -2.04
CDKN3-203ENST00000395577 BORCS7Q96B45 105 aa2.28□□□□□ -2.04
CDKN3-203ENST00000395577 DERL1Q9BUN8 251 aa2.28□□□□□ -2.04
CDKN3-203ENST00000395577 COMMD3Q9UBI1 195 aa2.28□□□□□ -2.04
CDKN3-203ENST00000395577 IGKV2-40A0A087WW87 121 aaPredicted RBP2.27□□□□□ -2.05
CDKN3-203ENST00000395577 TRAV26-2A0A0B4J265 109 aa2.27□□□□□ -2.05
CDKN3-203ENST00000395577 TRBV6-4A0A1B0GX49 114 aa2.27□□□□□ -2.05
CDKN3-203ENST00000395577 IGKV2D-40P01614 121 aaPredicted RBP2.27□□□□□ -2.05
CDKN3-203ENST00000395577 IGHV3-30P01768 117 aa2.27□□□□□ -2.05
CDKN3-203ENST00000395577 IGHV3-33P01772 117 aa2.27□□□□□ -2.05
CDKN3-203ENST00000395577 IGHV3-30-5P0DP03 117 aa2.27□□□□□ -2.05
CDKN3-203ENST00000395577 VBP1P61758 197 aa2.27□□□□□ -2.05
CDKN3-203ENST00000395577 LSM3P62310 102 aaKnown RBP2.27□□□□□ -2.05
CDKN3-203ENST00000395577 PDE6HQ13956 83 aa2.27□□□□□ -2.05
CDKN3-203ENST00000395577 NEDD8Q15843 81 aa2.27□□□□□ -2.05
CDKN3-203ENST00000395577 SCGB2B2Q4G0G5 96 aa2.27□□□□□ -2.05
CDKN3-203ENST00000395577 TMEM97Q5BJF2 176 aa2.27□□□□□ -2.05
CDKN3-203ENST00000395577 LINC00305Q7Z4B0 112 aa2.27□□□□□ -2.05
CDKN3-203ENST00000395577 C9orf163Q8N9P6 203 aa2.27□□□□□ -2.05
CDKN3-203ENST00000395577 TMEM14CQ9P0S9 112 aa2.27□□□□□ -2.05
CDKN3-203ENST00000395577 IL5P05113 134 aa2.26□□□□□ -2.05
CDKN3-203ENST00000395577 TRGC1P0CF51 173 aa2.26□□□□□ -2.05
CDKN3-203ENST00000395577 RNASE4P34096 147 aaKnown RBP2.26□□□□□ -2.05
CDKN3-203ENST00000395577 SPANXN5Q5MJ07 72 aa2.26□□□□□ -2.05
CDKN3-203ENST00000395577 CFAP126Q5VTH2 177 aa2.26□□□□□ -2.05
CDKN3-203ENST00000395577 ENHOQ6UWT2 76 aa2.26□□□□□ -2.05
CDKN3-203ENST00000395577 BPIFA4PQ86YQ2 179 aa2.26□□□□□ -2.05
CDKN3-203ENST00000395577 EXOC3-AS1Q8N2X6 119 aa2.26□□□□□ -2.05
CDKN3-203ENST00000395577 Q8TAT8 98 aa2.26□□□□□ -2.05
CDKN3-203ENST00000395577 CIB3Q96Q77 187 aaPredicted RBP2.26□□□□□ -2.05
CDKN3-203ENST00000395577 PRRT1Q99946 306 aa2.26□□□□□ -2.05
CDKN3-203ENST00000395577 PLAC8Q9NZF1 115 aa2.26□□□□□ -2.05
CDKN3-203ENST00000395577 TP73-AS1Q9UF72 201 aa2.26□□□□□ -2.05
CDKN3-203ENST00000395577 TRBV10-2A0A0K0K1G8 114 aa2.25□□□□□ -2.05
CDKN3-203ENST00000395577 FAM24AA6NFZ4 105 aa2.25□□□□□ -2.05
CDKN3-203ENST00000395577 M0R2P5 195 aa2.25□□□□□ -2.05
CDKN3-203ENST00000395577 SFT2D2O95562 160 aa2.25□□□□□ -2.05
CDKN3-203ENST00000395577 METTL15P1P0C7V9 234 aa2.25□□□□□ -2.05
CDKN3-203ENST00000395577 AKAIN1P0CW23 69 aa2.25□□□□□ -2.05
CDKN3-203ENST00000395577 PYYP10082 97 aa2.25□□□□□ -2.05
CDKN3-203ENST00000395577 RNASE3P12724 160 aaKnown RBP2.25□□□□□ -2.05
CDKN3-203ENST00000395577 CNBPP62633 177 aaKnown RBP2.25□□□□□ -2.05
CDKN3-203ENST00000395577 MRPS10P82664 201 aaKnown RBP2.25□□□□□ -2.05
CDKN3-203ENST00000395577 IAH1Q2TAA2 248 aaPredicted RBP2.25□□□□□ -2.05
CDKN3-203ENST00000395577 TMEM128Q5BJH2 165 aa2.25□□□□□ -2.05
CDKN3-203ENST00000395577 MIC13Q5XKP0 118 aa2.25□□□□□ -2.05
CDKN3-203ENST00000395577 CLVS1Q8IUQ0 354 aaPredicted RBP2.25□□□□□ -2.05
CDKN3-203ENST00000395577 TOMM6Q96B49 74 aa2.25□□□□□ -2.05
CDKN3-203ENST00000395577 NPVFQ9HCQ7 196 aa2.25□□□□□ -2.05
CDKN3-203ENST00000395577 TRAV9-1A0A075B6T8 112 aa2.24□□□□□ -2.05
CDKN3-203ENST00000395577 SMIM31A0A1B0GVY4 71 aa2.24□□□□□ -2.05
CDKN3-203ENST00000395577 RBAKDNA6NC62 111 aa2.24□□□□□ -2.05
CDKN3-203ENST00000395577 GPX1P07203 203 aa2.24□□□□□ -2.05
CDKN3-203ENST00000395577 ZNF80P51504 273 aaPredicted RBP2.24□□□□□ -2.05
CDKN3-203ENST00000395577 KRTAP12-4P60329 112 aa2.24□□□□□ -2.05
CDKN3-203ENST00000395577 RRAS2P62070 204 aaPredicted RBP2.24□□□□□ -2.05
CDKN3-203ENST00000395577 SPCS2Q15005 226 aa2.24□□□□□ -2.05
CDKN3-203ENST00000395577 RHOHQ15669 191 aa2.24□□□□□ -2.05
CDKN3-203ENST00000395577 ATP6V0E2Q8NHE4 81 aa2.24□□□□□ -2.05
CDKN3-203ENST00000395577 GGACTQ9BVM4 153 aa2.24□□□□□ -2.05
CDKN3-203ENST00000395577 CRCT1Q9UGL9 99 aa2.24□□□□□ -2.05
CDKN3-203ENST00000395577 LENEPQ9Y5L5 61 aa2.24□□□□□ -2.05
CDKN3-203ENST00000395577 V9GYH0 126 aa2.24□□□□□ -2.05
CDKN3-203ENST00000395577 C9orf170A2RU37 121 aa2.23□□□□□ -2.05
CDKN3-203ENST00000395577 C10orf113Q5VZT2 155 aa2.23□□□□□ -2.05
CDKN3-203ENST00000395577 SLC39A9Q9NUM3 307 aa2.23□□□□□ -2.05
CDKN3-203ENST00000395577 PSENENQ9NZ42 101 aa2.23□□□□□ -2.05
CDKN3-203ENST00000395577 FAM25AB3EWG3 89 aa2.22□□□□□ -2.05
CDKN3-203ENST00000395577 FAM25CB3EWG5 89 aa2.22□□□□□ -2.05
CDKN3-203ENST00000395577 FAM25GB3EWG6 89 aa2.22□□□□□ -2.05
CDKN3-203ENST00000395577 SSSCA1O60232 199 aa2.22□□□□□ -2.05
CDKN3-203ENST00000395577 NBEAP1P0C6P0 100 aa2.22□□□□□ -2.05
CDKN3-203ENST00000395577 MGST1P10620 155 aaKnown RBP2.22□□□□□ -2.05
CDKN3-203ENST00000395577 FXYD2P54710 66 aa2.22□□□□□ -2.05
CDKN3-203ENST00000395577 RPL19P84098 196 aaKnown RBP2.22□□□□□ -2.05
CDKN3-203ENST00000395577 NDUFA5Q16718 116 aa2.22□□□□□ -2.05
CDKN3-203ENST00000395577 MIR17HGQ75NE6 70 aa2.22□□□□□ -2.05
CDKN3-203ENST00000395577 ZNF625Q96I27 306 aaPredicted RBP2.22□□□□□ -2.05
CDKN3-203ENST00000395577 SIGMAR1Q99720 223 aa2.22□□□□□ -2.05
CDKN3-203ENST00000395577 CST9LQ9H4G1 147 aa2.22□□□□□ -2.05
CDKN3-203ENST00000395577 A0A087WXM4 84 aa2.21□□□□□ -2.06
CDKN3-203ENST00000395577 PDE6DO43924 150 aa2.21□□□□□ -2.06
CDKN3-203ENST00000395577 UBE2D3P61077 147 aa2.21□□□□□ -2.06
CDKN3-203ENST00000395577 UBE2D2P62837 147 aa2.21□□□□□ -2.06
CDKN3-203ENST00000395577 TMEM78Q5T7P6 136 aa2.21□□□□□ -2.06
CDKN3-203ENST00000395577 C7orf65Q6ZTY9 151 aa2.21□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms