RNA–Protein interactions for RNA: ENST00000395305.7

HLA-DMA-203, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

BASIC

Gene HLA-DMA, Length 777 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-203ENST00000395305 C18orf32Q8TCD1 76 aa8.68□□□□□ -1.02
HLA-DMA-203ENST00000395305 TOMM7Q9P0U1 55 aa8.68□□□□□ -1.02
HLA-DMA-203ENST00000395305 NDUFC2-KCTD14E9PQ53 114 aa8.67□□□□□ -1.02
HLA-DMA-203ENST00000395305 PMVKQ15126 192 aa8.67□□□□□ -1.02
HLA-DMA-203ENST00000395305 GAGE2EQ4V326 116 aa8.67□□□□□ -1.02
HLA-DMA-203ENST00000395305 GAGE2DQ9UEU5 116 aa8.67□□□□□ -1.02
HLA-DMA-203ENST00000395305 SRSF9Q13242 221 aaKnown RBP eCLIP8.66□□□□□ -1.02
HLA-DMA-203ENST00000395305 SPINK6Q6UWN8 80 aa8.66□□□□□ -1.02
HLA-DMA-203ENST00000395305 LINC00469Q8N7U9 141 aa8.66□□□□□ -1.02
HLA-DMA-203ENST00000395305 URB1-AS1Q96HZ7 61 aa8.66□□□□□ -1.02
HLA-DMA-203ENST00000395305 IGLV5-45A0A087WSX0 123 aa8.65□□□□□ -1.02
HLA-DMA-203ENST00000395305 RAB5BP61020 215 aa8.65□□□□□ -1.02
HLA-DMA-203ENST00000395305 PDZD11Q5EBL8 140 aa8.65□□□□□ -1.02
HLA-DMA-203ENST00000395305 SERTAD4-AS1Q5TG53 156 aa8.65□□□□□ -1.02
HLA-DMA-203ENST00000395305 PHF5AQ7RTV0 110 aaKnown RBP8.65□□□□□ -1.02
HLA-DMA-203ENST00000395305 YPEL4Q96NS1 127 aa8.65□□□□□ -1.02
HLA-DMA-203ENST00000395305 A0A096LNJ9 63 aa8.64□□□□□ -1.03
HLA-DMA-203ENST00000395305 FAM168BA1KXE4 195 aa8.64□□□□□ -1.03
HLA-DMA-203ENST00000395305 MT1HL1P0DM35 61 aa8.64□□□□□ -1.03
HLA-DMA-203ENST00000395305 PSORS1C2Q9UIG4 136 aa8.64□□□□□ -1.03
HLA-DMA-203ENST00000395305 SMIM1B2RUZ4 78 aa8.63□□□□□ -1.03
HLA-DMA-203ENST00000395305 F8VRH5 84 aa8.63□□□□□ -1.03
HLA-DMA-203ENST00000395305 CXCL5P42830 114 aa8.63□□□□□ -1.03
HLA-DMA-203ENST00000395305 HBDP02042 147 aa8.62□□□□□ -1.03
HLA-DMA-203ENST00000395305 KRTAP7-1Q8IUC3 87 aa8.62□□□□□ -1.03
HLA-DMA-203ENST00000395305 LINC01600Q96MT4 127 aa8.62□□□□□ -1.03
HLA-DMA-203ENST00000395305 NDUFA6P56556 154 aa8.61□□□□□ -1.03
HLA-DMA-203ENST00000395305 C9orf129Q5T035 196 aaKnown RBP8.61□□□□□ -1.03
HLA-DMA-203ENST00000395305 FAM19A5Q7Z5A7 132 aaPredicted RBP8.61□□□□□ -1.03
HLA-DMA-203ENST00000395305 COX7B2Q8TF08 81 aa8.61□□□□□ -1.03
HLA-DMA-203ENST00000395305 H3BRM9 83 aa8.6□□□□□ -1.03
HLA-DMA-203ENST00000395305 ATP5LO75964 103 aa8.6□□□□□ -1.03
HLA-DMA-203ENST00000395305 IGLC3P0DOY3 106 aa8.6□□□□□ -1.03
HLA-DMA-203ENST00000395305 REG3GQ6UW15 175 aa8.6□□□□□ -1.03
HLA-DMA-203ENST00000395305 SPINK8P0C7L1 97 aa8.59□□□□□ -1.03
HLA-DMA-203ENST00000395305 PMCHL1Q16048 86 aa8.59□□□□□ -1.03
HLA-DMA-203ENST00000395305 C1orf137Q5JT78 98 aa8.59□□□□□ -1.03
HLA-DMA-203ENST00000395305 M0QXV9 152 aa8.58□□□□□ -1.04
HLA-DMA-203ENST00000395305 ODF1Q14990 250 aa8.58□□□□□ -1.04
HLA-DMA-203ENST00000395305 CHCHD1Q96BP2 118 aaKnown RBP8.58□□□□□ -1.04
HLA-DMA-203ENST00000395305 BAGE3Q86Y29 109 aa8.57□□□□□ -1.04
HLA-DMA-203ENST00000395305 KRTAP11-1Q8IUC1 163 aa8.57□□□□□ -1.04
HLA-DMA-203ENST00000395305 CBLN2Q8IUK8 224 aa8.57□□□□□ -1.04
HLA-DMA-203ENST00000395305 SLC7A5P1Q8MH63 180 aa8.57□□□□□ -1.04
HLA-DMA-203ENST00000395305 IGLV5-39A0A0G2JS06 123 aa8.56□□□□□ -1.04
HLA-DMA-203ENST00000395305 IGLV7-43P04211 117 aa8.56□□□□□ -1.04
HLA-DMA-203ENST00000395305 XAGE1AQ9HD64 81 aa8.56□□□□□ -1.04
HLA-DMA-203ENST00000395305 ZNF22P17026 224 aaPredicted RBP8.55□□□□□ -1.04
HLA-DMA-203ENST00000395305 KRTAP10-8P60410 259 aa8.55□□□□□ -1.04
HLA-DMA-203ENST00000395305 UBE2BP63146 152 aa8.55□□□□□ -1.04
HLA-DMA-203ENST00000395305 C22orf24Q9Y442 160 aa8.55□□□□□ -1.04
HLA-DMA-203ENST00000395305 LBHQ53QV2 105 aaPredicted RBP8.54□□□□□ -1.04
HLA-DMA-203ENST00000395305 DIRC1Q969H9 104 aa8.53□□□□□ -1.04
HLA-DMA-203ENST00000395305 IFI27L1Q96BM0 104 aa8.53□□□□□ -1.04
HLA-DMA-203ENST00000395305 TP73-AS1Q9UF72 201 aa8.53□□□□□ -1.04
HLA-DMA-203ENST00000395305 TRAV12-1A0A0B4J245 112 aa8.52□□□□□ -1.05
HLA-DMA-203ENST00000395305 C11orf86A6NJI1 115 aa8.52□□□□□ -1.05
HLA-DMA-203ENST00000395305 TRGC2P03986 189 aa8.52□□□□□ -1.05
HLA-DMA-203ENST00000395305 PLA2G2DQ9UNK4 145 aa8.52□□□□□ -1.05
HLA-DMA-203ENST00000395305 CHTOPQ9Y3Y2 248 aaKnown RBP8.52□□□□□ -1.05
HLA-DMA-203ENST00000395305 TNXBP22105 4242 aa8.52□□□□□ -1.05
HLA-DMA-203ENST00000395305 TMEM170BQ5T4T1 132 aa8.51□□□□□ -1.05
HLA-DMA-203ENST00000395305 HSBP1O75506 76 aa8.5□□□□□ -1.05
HLA-DMA-203ENST00000395305 HMCN2Q8NDA2 5059 aa8.5□□□□□ -1.05
HLA-DMA-203ENST00000395305 H0Y9J4 135 aa8.49□□□□□ -1.05
HLA-DMA-203ENST00000395305 NUPR1O60356 82 aa8.49□□□□□ -1.05
HLA-DMA-203ENST00000395305 COX17Q14061 63 aa8.49□□□□□ -1.05
HLA-DMA-203ENST00000395305 SFTA2Q6UW10 78 aa8.49□□□□□ -1.05
HLA-DMA-203ENST00000395305 MRPL55Q7Z7F7 128 aaKnown RBP8.49□□□□□ -1.05
HLA-DMA-203ENST00000395305 FAM19A2Q8N3H0 131 aa8.49□□□□□ -1.05
HLA-DMA-203ENST00000395305 IGLV5-37A0A075B6J1 123 aa8.48□□□□□ -1.05
HLA-DMA-203ENST00000395305 COLCA2A8K830 154 aa8.48□□□□□ -1.05
HLA-DMA-203ENST00000395305 TMEM223A0PJW6 202 aa8.47□□□□□ -1.05
HLA-DMA-203ENST00000395305 PFN2P35080 140 aa8.47□□□□□ -1.05
HLA-DMA-203ENST00000395305 LINC00167Q96N53 147 aa8.47□□□□□ -1.05
HLA-DMA-203ENST00000395305 ERG28Q9UKR5 140 aa8.47□□□□□ -1.05
HLA-DMA-203ENST00000395305 ZNF625Q96I27 306 aaPredicted RBP8.46□□□□□ -1.06
HLA-DMA-203ENST00000395305 ZNF861PO60384 105 aa8.45□□□□□ -1.06
HLA-DMA-203ENST00000395305 SERF1AO75920 110 aa8.45□□□□□ -1.06
HLA-DMA-203ENST00000395305 SND1-IT1Q9HBX3 110 aa8.45□□□□□ -1.06
HLA-DMA-203ENST00000395305 RPL37AP8A6NKH3 93 aa8.44□□□□□ -1.06
HLA-DMA-203ENST00000395305 LEPROTL1O95214 131 aa8.44□□□□□ -1.06
HLA-DMA-203ENST00000395305 LINC00310P59036 64 aa8.44□□□□□ -1.06
HLA-DMA-203ENST00000395305 NKAPP1Q8N9T2 125 aa8.44□□□□□ -1.06
HLA-DMA-203ENST00000395305 BCE1O60756 84 aa8.43□□□□□ -1.06
HLA-DMA-203ENST00000395305 GAGE10A6NGK3 116 aa8.42□□□□□ -1.06
HLA-DMA-203ENST00000395305 RPL24P83731 157 aaKnown RBP8.42□□□□□ -1.06
HLA-DMA-203ENST00000395305 IGLV1-50A0A075B6I6 118 aa8.41□□□□□ -1.06
HLA-DMA-203ENST00000395305 KRTAP1-4P0C5Y4 121 aa8.41□□□□□ -1.06
HLA-DMA-203ENST00000395305 VPREB1P12018 145 aa8.41□□□□□ -1.06
HLA-DMA-203ENST00000395305 RPL28P46779 137 aaKnown RBP8.41□□□□□ -1.06
HLA-DMA-203ENST00000395305 LINC00158P58513 81 aa8.41□□□□□ -1.06
HLA-DMA-203ENST00000395305 PRR26Q8N8Z3 221 aa8.41□□□□□ -1.06
HLA-DMA-203ENST00000395305 HSPB8Q9UJY1 196 aa8.41□□□□□ -1.06
HLA-DMA-203ENST00000395305 H0Y8G0 127 aa8.39□□□□□ -1.07
HLA-DMA-203ENST00000395305 FABP4P15090 132 aa8.39□□□□□ -1.07
HLA-DMA-203ENST00000395305 HERV-K104P63124 156 aa8.39□□□□□ -1.07
HLA-DMA-203ENST00000395305 LINC00587B1AMM8 73 aa8.38□□□□□ -1.07
HLA-DMA-203ENST00000395305 SCO1O75880 301 aa8.38□□□□□ -1.07
HLA-DMA-203ENST00000395305 PLNP26678 52 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms