RNA–Protein interactions for RNA: ENST00000394768.6

SYNE2-205, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 11,095 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-205ENST00000394768 RNASE3P12724 160 aaKnown RBP5.4□□□□□ -1.55
SYNE2-205ENST00000394768 BRI3O95415 125 aa5.4□□□□□ -1.55
SYNE2-205ENST00000394768 ZNF462Q96JM2 2506 aa5.39□□□□□ -1.55
SYNE2-205ENST00000394768 C7orf65Q6ZTY9 151 aa5.39□□□□□ -1.55
SYNE2-205ENST00000394768 ANKRD11Q6UB99 2663 aaPredicted RBP5.39□□□□□ -1.55
SYNE2-205ENST00000394768 TRBV10-3A0A0K0K1G6 114 aa5.39□□□□□ -1.55
SYNE2-205ENST00000394768 PKD1L2Q7Z442 2459 aa5.39□□□□□ -1.55
SYNE2-205ENST00000394768 MRPS12O15235 138 aaKnown RBP5.39□□□□□ -1.55
SYNE2-205ENST00000394768 POLR2KP53803 58 aaKnown RBP5.39□□□□□ -1.55
SYNE2-205ENST00000394768 LINC00575Q6W349 94 aa5.39□□□□□ -1.55
SYNE2-205ENST00000394768 CXCL6P80162 114 aa5.39□□□□□ -1.55
SYNE2-205ENST00000394768 C11orf1Q9H5F2 150 aa5.38□□□□□ -1.55
SYNE2-205ENST00000394768 ACYP2P14621 99 aa5.38□□□□□ -1.55
SYNE2-205ENST00000394768 NCOR2Q9Y618 2525 aa5.38□□□□□ -1.55
SYNE2-205ENST00000394768 IGLV2-8P01709 118 aa5.38□□□□□ -1.55
SYNE2-205ENST00000394768 YPEL4Q96NS1 127 aa5.38□□□□□ -1.55
SYNE2-205ENST00000394768 TRBV7-7A0A0K0K1E9 115 aa5.37□□□□□ -1.55
SYNE2-205ENST00000394768 SPINK1P00995 79 aa5.36□□□□□ -1.55
SYNE2-205ENST00000394768 MTORP42345 2549 aa5.36□□□□□ -1.55
SYNE2-205ENST00000394768 A0A1B0GU69 56 aa5.36□□□□□ -1.55
SYNE2-205ENST00000394768 OXLD1Q5BKU9 147 aa5.36□□□□□ -1.55
SYNE2-205ENST00000394768 MSMPQ1L6U9 139 aa5.36□□□□□ -1.55
SYNE2-205ENST00000394768 H3BPC8 53 aa5.35□□□□□ -1.55
SYNE2-205ENST00000394768 IGLV2-11P01706 119 aa5.35□□□□□ -1.55
SYNE2-205ENST00000394768 UNQ6190/PRO20217Q6UXQ8 127 aa5.35□□□□□ -1.55
SYNE2-205ENST00000394768 PLA2G1BP04054 148 aaKnown RBP5.35□□□□□ -1.55
SYNE2-205ENST00000394768 Q8N3U1 123 aa5.35□□□□□ -1.55
SYNE2-205ENST00000394768 PLA2G2EQ9NZK7 142 aa5.35□□□□□ -1.55
SYNE2-205ENST00000394768 Q6ZTC4 211 aa5.35□□□□□ -1.55
SYNE2-205ENST00000394768 A0A087WSZ3 146 aa5.35□□□□□ -1.55
SYNE2-205ENST00000394768 SMIM1B2RUZ4 78 aa5.35□□□□□ -1.55
SYNE2-205ENST00000394768 A0A1W2PNU3 283 aaPredicted RBP5.35□□□□□ -1.55
SYNE2-205ENST00000394768 LINC00242Q5T6M2 205 aa5.34□□□□□ -1.55
SYNE2-205ENST00000394768 PROK1P58294 105 aa5.34□□□□□ -1.55
SYNE2-205ENST00000394768 SBSPONQ8IVN8 264 aa5.34□□□□□ -1.55
SYNE2-205ENST00000394768 CRIP2P52943 208 aaPredicted RBP5.34□□□□□ -1.55
SYNE2-205ENST00000394768 LINC00526Q96FQ7 95 aa5.34□□□□□ -1.55
SYNE2-205ENST00000394768 IGKV2D-30A0A075B6S6 120 aa5.34□□□□□ -1.55
SYNE2-205ENST00000394768 IGKV2-30P06310 120 aa5.34□□□□□ -1.55
SYNE2-205ENST00000394768 C1orf229Q6ZS94 237 aaPredicted RBP5.34□□□□□ -1.55
SYNE2-205ENST00000394768 CRIP1P50238 77 aa5.34□□□□□ -1.56
SYNE2-205ENST00000394768 COX6A2Q02221 97 aa5.34□□□□□ -1.56
SYNE2-205ENST00000394768 VPREB1P12018 145 aa5.34□□□□□ -1.56
SYNE2-205ENST00000394768 COL27A1Q8IZC6 1860 aaPredicted RBP5.33□□□□□ -1.56
SYNE2-205ENST00000394768 IGIPA6NJ69 53 aa5.33□□□□□ -1.56
SYNE2-205ENST00000394768 SPAG11AQ6PDA7 123 aa5.33□□□□□ -1.56
SYNE2-205ENST00000394768 MAPKAPK5-AS1Q8N8E1 139 aa5.32□□□□□ -1.56
SYNE2-205ENST00000394768 FLG2Q5D862 2391 aaPredicted RBP5.32□□□□□ -1.56
SYNE2-205ENST00000394768 H3BNG1 76 aa5.32□□□□□ -1.56
SYNE2-205ENST00000394768 C1orf64Q8NEQ6 169 aa5.32□□□□□ -1.56
SYNE2-205ENST00000394768 PRLHP81277 87 aa5.32□□□□□ -1.56
SYNE2-205ENST00000394768 ODF3L2Q3SX64 289 aa5.32□□□□□ -1.56
SYNE2-205ENST00000394768 ATP11AUNQ6ZP68 121 aa5.32□□□□□ -1.56
SYNE2-205ENST00000394768 FHL2Q14192 279 aa5.32□□□□□ -1.56
SYNE2-205ENST00000394768 TMEM254Q8TBM7 123 aa5.32□□□□□ -1.56
SYNE2-205ENST00000394768 POM121L12Q8N7R1 296 aa5.32□□□□□ -1.56
SYNE2-205ENST00000394768 LYPD5Q6UWN5 251 aa5.31□□□□□ -1.56
SYNE2-205ENST00000394768 CRYGAP11844 174 aa5.31□□□□□ -1.56
SYNE2-205ENST00000394768 C6orf48Q9UBA6 75 aa5.31□□□□□ -1.56
SYNE2-205ENST00000394768 CHD8Q9HCK8 2581 aa5.31□□□□□ -1.56
SYNE2-205ENST00000394768 BEAN1Q3B7T3 259 aa5.31□□□□□ -1.56
SYNE2-205ENST00000394768 PCOTHQ58A44 107 aa5.31□□□□□ -1.56
SYNE2-205ENST00000394768 C10orf99Q6UWK7 81 aa5.3□□□□□ -1.56
SYNE2-205ENST00000394768 AMELXQ99217 191 aa5.3□□□□□ -1.56
SYNE2-205ENST00000394768 FHL3Q13643 280 aa5.3□□□□□ -1.56
SYNE2-205ENST00000394768 MUC22E2RYF6 1773 aaPredicted RBP5.3□□□□□ -1.56
SYNE2-205ENST00000394768 Q6ZRP5 223 aa5.3□□□□□ -1.56
SYNE2-205ENST00000394768 KIF25-AS1Q9Y6Z4 181 aa5.3□□□□□ -1.56
SYNE2-205ENST00000394768 TRAV22A0A0B4J277 110 aa5.3□□□□□ -1.56
SYNE2-205ENST00000394768 Q8NBF4 154 aa5.3□□□□□ -1.56
SYNE2-205ENST00000394768 J3QL48 77 aa5.3□□□□□ -1.56
SYNE2-205ENST00000394768 SPTBN4Q9H254 2564 aa5.29□□□□□ -1.56
SYNE2-205ENST00000394768 A8MZ25 164 aa5.29□□□□□ -1.56
SYNE2-205ENST00000394768 MDFIQ99750 246 aa5.29□□□□□ -1.56
SYNE2-205ENST00000394768 C2orf91Q6ZV80 131 aa5.29□□□□□ -1.56
SYNE2-205ENST00000394768 BCE1O60756 84 aa5.29□□□□□ -1.56
SYNE2-205ENST00000394768 LINC00313P59037 77 aa5.29□□□□□ -1.56
SYNE2-205ENST00000394768 SERTAD4-AS1Q5TG53 156 aa5.29□□□□□ -1.56
SYNE2-205ENST00000394768 RETNLBQ9BQ08 111 aa5.29□□□□□ -1.56
SYNE2-205ENST00000394768 USP9YO00507 2555 aaPredicted RBP5.28□□□□□ -1.56
SYNE2-205ENST00000394768 PSPHP1O15172 72 aa5.28□□□□□ -1.56
SYNE2-205ENST00000394768 BRWD1-AS2P59051 145 aa5.28□□□□□ -1.56
SYNE2-205ENST00000394768 C9orf116Q5BN46 136 aaPredicted RBP5.28□□□□□ -1.56
SYNE2-205ENST00000394768 PRR9Q5T870 116 aa5.28□□□□□ -1.56
SYNE2-205ENST00000394768 SPACA4Q8TDM5 124 aa5.28□□□□□ -1.56
SYNE2-205ENST00000394768 C18orf65Q6ZTR6 163 aa5.28□□□□□ -1.56
SYNE2-205ENST00000394768 A0A087WYN8 130 aa5.28□□□□□ -1.56
SYNE2-205ENST00000394768 C8orf87E5RJ46 101 aa5.28□□□□□ -1.56
SYNE2-205ENST00000394768 IGLV4-60A0A075B6I1 120 aa5.27□□□□□ -1.57
SYNE2-205ENST00000394768 LINC00694P0DN24 101 aa5.27□□□□□ -1.57
SYNE2-205ENST00000394768 COX8CQ7Z4L0 72 aa5.27□□□□□ -1.57
SYNE2-205ENST00000394768 MOBPQ13875 183 aa5.27□□□□□ -1.57
SYNE2-205ENST00000394768 TYMSOSQ8TAI1 123 aa5.27□□□□□ -1.57
SYNE2-205ENST00000394768 CCDC179H3BU77 68 aa5.26□□□□□ -1.57
SYNE2-205ENST00000394768 Q6ZS46 218 aa5.26□□□□□ -1.57
SYNE2-205ENST00000394768 C22orf24Q9Y442 160 aa5.26□□□□□ -1.57
SYNE2-205ENST00000394768 SMCR5Q8TEV8 140 aa5.26□□□□□ -1.57
SYNE2-205ENST00000394768 FASNP49327 2511 aaKnown RBP5.26□□□□□ -1.57
SYNE2-205ENST00000394768 LOC101927531A0A1B0GV80 90 aa5.25□□□□□ -1.57
SYNE2-205ENST00000394768 SOSTDC1Q6X4U4 206 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms