RNA–Protein interactions for RNA: ENST00000394253.7

USP49-203, Transcript of ubiquitin specific peptidase 49, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP49, Length 9,034 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-203ENST00000394253 Q9BRP9 147 aa9.85□□□□□ -0.83
USP49-203ENST00000394253 EGFEM1PQ0D2K5 195 aa9.84□□□□□ -0.83
USP49-203ENST00000394253 DEFB114Q30KQ6 69 aa9.84□□□□□ -0.83
USP49-203ENST00000394253 SSBP3-AS1Q7Z2R9 100 aa9.84□□□□□ -0.83
USP49-203ENST00000394253 CNFNQ9BYD5 112 aa9.84□□□□□ -0.83
USP49-203ENST00000394253 A0A087WYN8 130 aa9.84□□□□□ -0.83
USP49-203ENST00000394253 C4orf26Q17RF5 130 aa9.84□□□□□ -0.83
USP49-203ENST00000394253 MSMPQ1L6U9 139 aa9.84□□□□□ -0.83
USP49-203ENST00000394253 TNFRSF13BO14836 293 aaPredicted RBP9.83□□□□□ -0.84
USP49-203ENST00000394253 CYSRT1A8MQ03 144 aa9.83□□□□□ -0.84
USP49-203ENST00000394253 IGKV2D-30A0A075B6S6 120 aa9.83□□□□□ -0.84
USP49-203ENST00000394253 IGKV2-30P06310 120 aa9.83□□□□□ -0.84
USP49-203ENST00000394253 ODF3BA8MYP8 253 aa9.82□□□□□ -0.84
USP49-203ENST00000394253 BCE1O60756 84 aa9.82□□□□□ -0.84
USP49-203ENST00000394253 C11orf1Q9H5F2 150 aa9.82□□□□□ -0.84
USP49-203ENST00000394253 H3BPC8 53 aa9.82□□□□□ -0.84
USP49-203ENST00000394253 A0A1B0GW54 56 aa9.81□□□□□ -0.84
USP49-203ENST00000394253 COL4A1P02462 1669 aa9.81□□□□□ -0.84
USP49-203ENST00000394253 SHISA2Q6UWI4 295 aa9.8□□□□□ -0.84
USP49-203ENST00000394253 CRIPTQ9P021 101 aa9.8□□□□□ -0.84
USP49-203ENST00000394253 CDC42SE2Q9NRR3 84 aa9.8□□□□□ -0.84
USP49-203ENST00000394253 SPRNQ5BIV9 151 aa9.79□□□□□ -0.84
USP49-203ENST00000394253 LINC00574Q9H8X3 128 aa9.79□□□□□ -0.84
USP49-203ENST00000394253 COL4A5P29400 1685 aa9.79□□□□□ -0.84
USP49-203ENST00000394253 CRIP1P50238 77 aa9.79□□□□□ -0.84
USP49-203ENST00000394253 MDFIQ99750 246 aa9.79□□□□□ -0.84
USP49-203ENST00000394253 A0A087WSZ3 146 aa9.78□□□□□ -0.84
USP49-203ENST00000394253 LTBP2Q14767 1821 aa9.78□□□□□ -0.84
USP49-203ENST00000394253 ZFP36P26651 326 aaKnown RBP9.78□□□□□ -0.84
USP49-203ENST00000394253 CD164Q04900 197 aa9.78□□□□□ -0.84
USP49-203ENST00000394253 Q8N7P7 452 aa9.77□□□□□ -0.84
USP49-203ENST00000394253 CRIP2P52943 208 aaPredicted RBP9.77□□□□□ -0.85
USP49-203ENST00000394253 BBC3Q96PG8 261 aaPredicted RBP9.77□□□□□ -0.85
USP49-203ENST00000394253 CHCHD7Q9BUK0 85 aa9.77□□□□□ -0.85
USP49-203ENST00000394253 POLR2KP53803 58 aaKnown RBP9.76□□□□□ -0.85
USP49-203ENST00000394253 CYP4F30PQ9H0H9 118 aa9.76□□□□□ -0.85
USP49-203ENST00000394253 FSHBP01225 129 aa9.76□□□□□ -0.85
USP49-203ENST00000394253 KLLNB2CW77 178 aa9.75□□□□□ -0.85
USP49-203ENST00000394253 C2orf48Q96LS8 159 aa9.75□□□□□ -0.85
USP49-203ENST00000394253 IGLV2-11P01706 119 aa9.75□□□□□ -0.85
USP49-203ENST00000394253 IGIPA6NJ69 53 aa9.75□□□□□ -0.85
USP49-203ENST00000394253 IGF2-ASQ6U949 168 aa9.74□□□□□ -0.85
USP49-203ENST00000394253 FSTL3O95633 263 aa9.74□□□□□ -0.85
USP49-203ENST00000394253 LINC00846Q9NV44 126 aa9.74□□□□□ -0.85
USP49-203ENST00000394253 TRAV22A0A0B4J277 110 aa9.74□□□□□ -0.85
USP49-203ENST00000394253 GRNP28799 593 aaKnown RBP9.74□□□□□ -0.85
USP49-203ENST00000394253 NUPR2A6NF83 97 aa9.73□□□□□ -0.85
USP49-203ENST00000394253 LINC00482Q8N8I6 264 aa9.73□□□□□ -0.85
USP49-203ENST00000394253 Q9UF83 564 aa9.73□□□□□ -0.85
USP49-203ENST00000394253 PROK1P58294 105 aa9.73□□□□□ -0.85
USP49-203ENST00000394253 SMIM1B2RUZ4 78 aa9.72□□□□□ -0.85
USP49-203ENST00000394253 LUZP6Q538Z0 58 aa9.72□□□□□ -0.85
USP49-203ENST00000394253 IGLV2-18A0A075B6J9 118 aa9.71□□□□□ -0.85
USP49-203ENST00000394253 SMIM29Q86T20 159 aa9.71□□□□□ -0.85
USP49-203ENST00000394253 LINC00337Q8N6G1 96 aa9.71□□□□□ -0.85
USP49-203ENST00000394253 Q8N2B8 174 aa9.71□□□□□ -0.86
USP49-203ENST00000394253 IGLV5-52A0A0A0MRZ9 124 aa9.7□□□□□ -0.86
USP49-203ENST00000394253 UNQ6190/PRO20217Q6UXQ8 127 aa9.7□□□□□ -0.86
USP49-203ENST00000394253 LINC00242Q5T6M2 205 aa9.7□□□□□ -0.86
USP49-203ENST00000394253 COL4A6Q14031 1691 aa9.69□□□□□ -0.86
USP49-203ENST00000394253 Q6YL49 198 aa9.69□□□□□ -0.86
USP49-203ENST00000394253 AKAP13Q12802 2813 aa9.69□□□□□ -0.86
USP49-203ENST00000394253 UQCR11O14957 56 aa9.69□□□□□ -0.86
USP49-203ENST00000394253 DEFB116Q30KQ4 102 aa9.69□□□□□ -0.86
USP49-203ENST00000394253 IGLV8-61A0A075B6I0 122 aa9.68□□□□□ -0.86
USP49-203ENST00000394253 IGFL2Q6UWQ7 119 aa9.68□□□□□ -0.86
USP49-203ENST00000394253 LINC01556Q5JQF7 62 aa9.68□□□□□ -0.86
USP49-203ENST00000394253 U3KQA8 63 aa9.68□□□□□ -0.86
USP49-203ENST00000394253 C9orf116Q5BN46 136 aaPredicted RBP9.67□□□□□ -0.86
USP49-203ENST00000394253 LINC01561Q8N1V8 128 aa9.67□□□□□ -0.86
USP49-203ENST00000394253 C6orf223Q8N319 242 aa9.67□□□□□ -0.86
USP49-203ENST00000394253 PRR3P79522 188 aaKnown RBP9.67□□□□□ -0.86
USP49-203ENST00000394253 KTN1-AS1Q86SY8 53 aa9.66□□□□□ -0.86
USP49-203ENST00000394253 CDIP1Q9H305 208 aa9.66□□□□□ -0.86
USP49-203ENST00000394253 M0R2N4 97 aa9.66□□□□□ -0.86
USP49-203ENST00000394253 LY6G6CO95867 125 aa9.65□□□□□ -0.86
USP49-203ENST00000394253 A0A1B0GUV1 79 aa9.65□□□□□ -0.87
USP49-203ENST00000394253 ADAMTSL4-AS1Q5T5F5 129 aa9.65□□□□□ -0.87
USP49-203ENST00000394253 FBXL19-AS1Q494R0 122 aa9.64□□□□□ -0.87
USP49-203ENST00000394253 LINC01600Q96MT4 127 aa9.64□□□□□ -0.87
USP49-203ENST00000394253 LINC01554Q52M75 96 aa9.63□□□□□ -0.87
USP49-203ENST00000394253 PLA2G2CQ5R387 149 aa9.63□□□□□ -0.87
USP49-203ENST00000394253 ERC2-IT1O76042 136 aa9.63□□□□□ -0.87
USP49-203ENST00000394253 AMELXQ99217 191 aa9.63□□□□□ -0.87
USP49-203ENST00000394253 COX6A2Q02221 97 aa9.62□□□□□ -0.87
USP49-203ENST00000394253 PIP4P1Q86T03 277 aa9.62□□□□□ -0.87
USP49-203ENST00000394253 ADORA2A-AS1P86434 159 aa9.6□□□□□ -0.87
USP49-203ENST00000394253 PSMG3-AS1Q96PY0 264 aa9.59□□□□□ -0.87
USP49-203ENST00000394253 HECTD1Q9ULT8 2610 aa9.59□□□□□ -0.87
USP49-203ENST00000394253 ELOF1P60002 83 aaKnown RBP9.58□□□□□ -0.88
USP49-203ENST00000394253 LINC00313P59037 77 aa9.58□□□□□ -0.88
USP49-203ENST00000394253 ZNF295-AS1Q8N0V1 137 aa9.58□□□□□ -0.88
USP49-203ENST00000394253 NHLRC4P0CG21 123 aaPredicted RBP9.58□□□□□ -0.88
USP49-203ENST00000394253 LOC101927531A0A1B0GV80 90 aa9.58□□□□□ -0.88
USP49-203ENST00000394253 TSPEAR-AS2P59090 65 aa9.57□□□□□ -0.88
USP49-203ENST00000394253 C11orf72Q8NBR9 251 aa9.57□□□□□ -0.88
USP49-203ENST00000394253 Q6ZSV7 163 aa9.57□□□□□ -0.88
USP49-203ENST00000394253 COL4A4P53420 1690 aaPredicted RBP9.56□□□□□ -0.88
USP49-203ENST00000394253 PRR9Q5T870 116 aa9.56□□□□□ -0.88
USP49-203ENST00000394253 LCA10Q71F78 164 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms