RNA–Protein interactions for RNA: ENST00000393693.6

SNCB-202, Transcript of synuclein beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCB, Length 1,234 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCB-202ENST00000393693 LINC00959A0A1B0GUT2 108 aa12.22□□□□□ -0.45
SNCB-202ENST00000393693 TMEM223A0PJW6 202 aa12.22□□□□□ -0.45
SNCB-202ENST00000393693 DDTP30046 118 aa12.22□□□□□ -0.45
SNCB-202ENST00000393693 HMCN2Q8NDA2 5059 aa12.21□□□□□ -0.45
SNCB-202ENST00000393693 DLEU1O43261 78 aa12.21□□□□□ -0.45
SNCB-202ENST00000393693 REG3AQ06141 175 aa12.21□□□□□ -0.45
SNCB-202ENST00000393693 LINC00269Q8N2A0 174 aa12.21□□□□□ -0.45
SNCB-202ENST00000393693 PLEKHB2Q96CS7 222 aa12.21□□□□□ -0.45
SNCB-202ENST00000393693 IGKV2D-26A0A0A0MRZ7 120 aa12.19□□□□□ -0.46
SNCB-202ENST00000393693 TRAV8-3A0A0A6YYJ7 113 aa12.19□□□□□ -0.46
SNCB-202ENST00000393693 LEPROTO15243 131 aa12.19□□□□□ -0.46
SNCB-202ENST00000393693 CRPP02741 224 aa12.19□□□□□ -0.46
SNCB-202ENST00000393693 HNRNPA3P51991 378 aaKnown RBP12.19□□□□□ -0.46
SNCB-202ENST00000393693 SCXQ7RTU7 201 aa12.19□□□□□ -0.46
SNCB-202ENST00000393693 BOD1L2Q8IYS8 172 aa12.19□□□□□ -0.46
SNCB-202ENST00000393693 CDKN2A-AS1Q9UH64 79 aa12.19□□□□□ -0.46
SNCB-202ENST00000393693 LGALS3P17931 250 aaKnown RBP12.18□□□□□ -0.46
SNCB-202ENST00000393693 COX6A2Q02221 97 aa12.18□□□□□ -0.46
SNCB-202ENST00000393693 KLK12Q9UKR0 248 aa12.18□□□□□ -0.46
SNCB-202ENST00000393693 FAT3Q8TDW7 4589 aa12.18□□□□□ -0.46
SNCB-202ENST00000393693 IGHV1-58A0A0C4DH39 117 aa12.17□□□□□ -0.46
SNCB-202ENST00000393693 CLPSL2Q6UWE3 100 aa12.17□□□□□ -0.46
SNCB-202ENST00000393693 J3QQQ9 107 aa12.16□□□□□ -0.46
SNCB-202ENST00000393693 PCP2Q8IVA1 136 aa12.16□□□□□ -0.46
SNCB-202ENST00000393693 PRR34Q9NV39 138 aa12.16□□□□□ -0.46
SNCB-202ENST00000393693 TRAV8-4A0A0B4J246 113 aa12.15□□□□□ -0.46
SNCB-202ENST00000393693 SPINK8P0C7L1 97 aa12.15□□□□□ -0.46
SNCB-202ENST00000393693 KRTAP10-4P60372 401 aaPredicted RBP12.15□□□□□ -0.46
SNCB-202ENST00000393693 MYMXA0A1B0GTQ4 84 aa12.14□□□□□ -0.47
SNCB-202ENST00000393693 CD164L2Q6UWJ8 174 aa12.14□□□□□ -0.47
SNCB-202ENST00000393693 LINC01561Q8N1V8 128 aa12.14□□□□□ -0.47
SNCB-202ENST00000393693 UBR4Q5T4S7 5183 aa12.13□□□□□ -0.47
SNCB-202ENST00000393693 IGHV3-64A0A075B6Q5 118 aa12.13□□□□□ -0.47
SNCB-202ENST00000393693 IGKV2D-24A0A075B6R9 120 aa12.13□□□□□ -0.47
SNCB-202ENST00000393693 IGHV3OR16-9A0A0B4J2B5 98 aa12.13□□□□□ -0.47
SNCB-202ENST00000393693 ZNF815PA8K554 130 aa12.13□□□□□ -0.47
SNCB-202ENST00000393693 XCL1P47992 114 aa12.13□□□□□ -0.47
SNCB-202ENST00000393693 MIAQ16674 131 aa12.13□□□□□ -0.47
SNCB-202ENST00000393693 CHCHD10Q8WYQ3 142 aaPredicted RBP12.13□□□□□ -0.47
SNCB-202ENST00000393693 UBE2WQ96B02 151 aa12.13□□□□□ -0.47
SNCB-202ENST00000393693 A0A087WZ39 114 aa12.12□□□□□ -0.47
SNCB-202ENST00000393693 CIRBP-AS1Q8TBR5 109 aa12.12□□□□□ -0.47
SNCB-202ENST00000393693 COX11Q9Y6N1 276 aa12.12□□□□□ -0.47
SNCB-202ENST00000393693 IGLV5-39A0A0G2JS06 123 aa12.11□□□□□ -0.47
SNCB-202ENST00000393693 SMIM1B2RUZ4 78 aa12.11□□□□□ -0.47
SNCB-202ENST00000393693 ENHOQ6UWT2 76 aa12.11□□□□□ -0.47
SNCB-202ENST00000393693 COX7A2LO14548 114 aa12.1□□□□□ -0.47
SNCB-202ENST00000393693 C5orf38Q86SI9 138 aa12.1□□□□□ -0.47
SNCB-202ENST00000393693 RMI2Q96E14 147 aa12.1□□□□□ -0.47
SNCB-202ENST00000393693 HIGD1BQ9P298 99 aa12.1□□□□□ -0.47
SNCB-202ENST00000393693 IGLV10-54A0A075B6I4 117 aa12.09□□□□□ -0.47
SNCB-202ENST00000393693 SERTAD4-AS1Q5TG53 156 aa12.09□□□□□ -0.47
SNCB-202ENST00000393693 SCGB1D4Q6XE38 83 aa12.09□□□□□ -0.47
SNCB-202ENST00000393693 TTTY13Q9BZ97 58 aa12.09□□□□□ -0.47
SNCB-202ENST00000393693 LINC00587B1AMM8 73 aa12.08□□□□□ -0.48
SNCB-202ENST00000393693 MALP21145 153 aa12.08□□□□□ -0.48
SNCB-202ENST00000393693 TSPEAR-AS2P59090 65 aa12.08□□□□□ -0.48
SNCB-202ENST00000393693 CTAG1AP78358 180 aa12.08□□□□□ -0.48
SNCB-202ENST00000393693 GAGE12HA6NDE8 117 aa12.07□□□□□ -0.48
SNCB-202ENST00000393693 APOMO95445 188 aa12.07□□□□□ -0.48
SNCB-202ENST00000393693 C2orf91Q6ZV80 131 aa12.07□□□□□ -0.48
SNCB-202ENST00000393693 NDUFA12Q9UI09 145 aa12.07□□□□□ -0.48
SNCB-202ENST00000393693 COX7B2Q8TF08 81 aa12.06□□□□□ -0.48
SNCB-202ENST00000393693 C1orf43Q9BWL3 253 aa12.06□□□□□ -0.48
SNCB-202ENST00000393693 TP73-AS1Q9UF72 201 aa12.06□□□□□ -0.48
SNCB-202ENST00000393693 OXTP01178 125 aa12.05□□□□□ -0.48
SNCB-202ENST00000393693 FOXI1Q12951 378 aa12.05□□□□□ -0.48
SNCB-202ENST00000393693 SFTA2Q6UW10 78 aa12.05□□□□□ -0.48
SNCB-202ENST00000393693 PKHD1L1Q86WI1 4243 aa12.05□□□□□ -0.48
SNCB-202ENST00000393693 NDUFA1O15239 70 aa12.04□□□□□ -0.48
SNCB-202ENST00000393693 PRSS2P07478 247 aa12.04□□□□□ -0.48
SNCB-202ENST00000393693 TOMM7Q9P0U1 55 aa12.04□□□□□ -0.48
SNCB-202ENST00000393693 M0R143 59 aa12.03□□□□□ -0.48
SNCB-202ENST00000393693 HERV-K104P63124 156 aa12.03□□□□□ -0.48
SNCB-202ENST00000393693 HSD52Q0P140 79 aa12.03□□□□□ -0.48
SNCB-202ENST00000393693 TAL2Q16559 108 aa12.02□□□□□ -0.49
SNCB-202ENST00000393693 Q8IZM0 81 aa12.02□□□□□ -0.49
SNCB-202ENST00000393693 C6orf226Q5I0X4 101 aa12.01□□□□□ -0.49
SNCB-202ENST00000393693 CFAP161Q6P656 301 aa12.01□□□□□ -0.49
SNCB-202ENST00000393693 ORAOV1Q8WV07 137 aa12.01□□□□□ -0.49
SNCB-202ENST00000393693 PLA2G2DQ9UNK4 145 aa12.01□□□□□ -0.49
SNCB-202ENST00000393693 A0A0J9YXY3 114 aa12□□□□□ -0.49
SNCB-202ENST00000393693 TMEM238C9JI98 176 aa12□□□□□ -0.49
SNCB-202ENST00000393693 CIRBPQ14011 172 aaKnown RBP12□□□□□ -0.49
SNCB-202ENST00000393693 CXCL5P42830 114 aa11.99□□□□□ -0.49
SNCB-202ENST00000393693 RPL37AP61513 92 aaKnown RBP11.99□□□□□ -0.49
SNCB-202ENST00000393693 SRSF9Q13242 221 aaKnown RBP eCLIP11.99□□□□□ -0.49
SNCB-202ENST00000393693 HIST1H4GQ99525 98 aa11.99□□□□□ -0.49
SNCB-202ENST00000393693 SPANXB1Q9NS25 103 aaPredicted RBP11.99□□□□□ -0.49
SNCB-202ENST00000393693 TIMM17BO60830 172 aa11.97□□□□□ -0.49
SNCB-202ENST00000393693 HINT1P49773 126 aaPredicted RBP11.97□□□□□ -0.49
SNCB-202ENST00000393693 CKS1BP61024 79 aa11.97□□□□□ -0.49
SNCB-202ENST00000393693 C14orf177Q52M58 125 aa11.97□□□□□ -0.49
SNCB-202ENST00000393693 KRTAP26-1Q6PEX3 210 aa11.97□□□□□ -0.49
SNCB-202ENST00000393693 ZNF625Q96I27 306 aaPredicted RBP11.97□□□□□ -0.49
SNCB-202ENST00000393693 USP17L23D6RBM5 183 aa11.96□□□□□ -0.49
SNCB-202ENST00000393693 SPAG11BQ08648 103 aa11.95□□□□□ -0.5
SNCB-202ENST00000393693 BATFQ16520 125 aa11.95□□□□□ -0.5
SNCB-202ENST00000393693 MEIG1Q5JSS6 88 aa11.95□□□□□ -0.5
SNCB-202ENST00000393693 Q6ZVH6 145 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 92.2 ms