RNA–Protein interactions for RNA: ENST00000393368.2

HMGB3P1-201, Transcript of high mobility group box 3 pseudogene 1, humanhuman

BASIC

Gene HMGB3P1, Length 573 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P1-201ENST00000393368 NPSP0C0P6 89 aa4.81□□□□□ -1.64
HMGB3P1-201ENST00000393368 LINC00614P0C842 121 aa4.81□□□□□ -1.64
HMGB3P1-201ENST00000393368 G0S2P27469 103 aa4.81□□□□□ -1.64
HMGB3P1-201ENST00000393368 NDUFA6P56556 154 aa4.81□□□□□ -1.64
HMGB3P1-201ENST00000393368 HERVK_113P63121 156 aa4.81□□□□□ -1.64
HMGB3P1-201ENST00000393368 ANKRD39Q53RE8 183 aa4.81□□□□□ -1.64
HMGB3P1-201ENST00000393368 C9orf116Q5BN46 136 aaPredicted RBP4.81□□□□□ -1.64
HMGB3P1-201ENST00000393368 PAPPA-AS1Q5QFB9 102 aa4.81□□□□□ -1.64
HMGB3P1-201ENST00000393368 FAM19A3Q7Z5A8 133 aa4.81□□□□□ -1.64
HMGB3P1-201ENST00000393368 LINC00469Q8N7U9 141 aa4.81□□□□□ -1.64
HMGB3P1-201ENST00000393368 CST9LQ9H4G1 147 aa4.81□□□□□ -1.64
HMGB3P1-201ENST00000393368 GEMIN7Q9H840 131 aaKnown RBP4.81□□□□□ -1.64
HMGB3P1-201ENST00000393368 MRPL35Q9NZE8 188 aaKnown RBP4.81□□□□□ -1.64
HMGB3P1-201ENST00000393368 FAM168BA1KXE4 195 aa4.8□□□□□ -1.64
HMGB3P1-201ENST00000393368 HBDP02042 147 aa4.8□□□□□ -1.64
HMGB3P1-201ENST00000393368 SPINK8P0C7L1 97 aa4.8□□□□□ -1.64
HMGB3P1-201ENST00000393368 PMVKQ15126 192 aa4.8□□□□□ -1.64
HMGB3P1-201ENST00000393368 GAGE2EQ4V326 116 aa4.8□□□□□ -1.64
HMGB3P1-201ENST00000393368 Q6ZRP5 223 aa4.8□□□□□ -1.64
HMGB3P1-201ENST00000393368 PACRGQ96M98 296 aaPredicted RBP4.8□□□□□ -1.64
HMGB3P1-201ENST00000393368 LINC00474Q9P2X8 69 aa4.8□□□□□ -1.64
HMGB3P1-201ENST00000393368 GAGE2DQ9UEU5 116 aa4.8□□□□□ -1.64
HMGB3P1-201ENST00000393368 FLG2Q5D862 2391 aaPredicted RBP4.8□□□□□ -1.64
HMGB3P1-201ENST00000393368 TINCRA0A1B0GVN0 87 aa4.79□□□□□ -1.64
HMGB3P1-201ENST00000393368 SMIM1B2RUZ4 78 aa4.79□□□□□ -1.64
HMGB3P1-201ENST00000393368 SCO1O75880 301 aa4.79□□□□□ -1.64
HMGB3P1-201ENST00000393368 TRGC2P03986 189 aa4.79□□□□□ -1.64
HMGB3P1-201ENST00000393368 PRSS2P07478 247 aa4.79□□□□□ -1.64
HMGB3P1-201ENST00000393368 RNF151Q2KHN1 245 aa4.79□□□□□ -1.64
HMGB3P1-201ENST00000393368 PDZD11Q5EBL8 140 aa4.79□□□□□ -1.64
HMGB3P1-201ENST00000393368 LCE3BQ5TA77 95 aa4.79□□□□□ -1.64
HMGB3P1-201ENST00000393368 LINC01561Q8N1V8 128 aa4.79□□□□□ -1.64
HMGB3P1-201ENST00000393368 C7orf33Q8WU49 177 aa4.79□□□□□ -1.64
HMGB3P1-201ENST00000393368 KRTAP4-12Q9BQ66 201 aa4.79□□□□□ -1.64
HMGB3P1-201ENST00000393368 PKIGQ9Y2B9 76 aa4.79□□□□□ -1.64
HMGB3P1-201ENST00000393368 CKS1BP61024 79 aa4.78□□□□□ -1.64
HMGB3P1-201ENST00000393368 PRR3P79522 188 aaKnown RBP4.78□□□□□ -1.64
HMGB3P1-201ENST00000393368 C6orf226Q5I0X4 101 aa4.78□□□□□ -1.64
HMGB3P1-201ENST00000393368 PHF5AQ7RTV0 110 aaKnown RBP4.78□□□□□ -1.64
HMGB3P1-201ENST00000393368 FAM19A5Q7Z5A7 132 aaPredicted RBP4.78□□□□□ -1.64
HMGB3P1-201ENST00000393368 Q8IZM0 81 aa4.78□□□□□ -1.64
HMGB3P1-201ENST00000393368 IGLV5-45A0A087WSX0 123 aa4.77□□□□□ -1.65
HMGB3P1-201ENST00000393368 TRBV30A0A0K0K1B3 111 aa4.77□□□□□ -1.65
HMGB3P1-201ENST00000393368 LINC01549A6NIU2 74 aa4.77□□□□□ -1.65
HMGB3P1-201ENST00000393368 COLCA2A8K830 154 aa4.77□□□□□ -1.65
HMGB3P1-201ENST00000393368 F8WDY8 70 aa4.77□□□□□ -1.65
HMGB3P1-201ENST00000393368 TLX1NBP0CAT3 122 aa4.77□□□□□ -1.65
HMGB3P1-201ENST00000393368 IGLC3P0DOY3 106 aa4.77□□□□□ -1.65
HMGB3P1-201ENST00000393368 RAB5BP61020 215 aa4.77□□□□□ -1.65
HMGB3P1-201ENST00000393368 SEC11AP67812 179 aa4.77□□□□□ -1.65
HMGB3P1-201ENST00000393368 C9orf129Q5T035 196 aaKnown RBP4.77□□□□□ -1.65
HMGB3P1-201ENST00000393368 KRTAP7-1Q8IUC3 87 aa4.77□□□□□ -1.65
HMGB3P1-201ENST00000393368 FAM19A2Q8N3H0 131 aa4.77□□□□□ -1.65
HMGB3P1-201ENST00000393368 ZNF22P17026 224 aaPredicted RBP4.76□□□□□ -1.65
HMGB3P1-201ENST00000393368 LINC00310P59036 64 aa4.76□□□□□ -1.65
HMGB3P1-201ENST00000393368 BAGE3Q86Y29 109 aa4.76□□□□□ -1.65
HMGB3P1-201ENST00000393368 KRTAP11-1Q8IUC1 163 aa4.76□□□□□ -1.65
HMGB3P1-201ENST00000393368 COX7B2Q8TF08 81 aa4.76□□□□□ -1.65
HMGB3P1-201ENST00000393368 CHCHD1Q96BP2 118 aaKnown RBP4.76□□□□□ -1.65
HMGB3P1-201ENST00000393368 TNXBP22105 4242 aa4.76□□□□□ -1.65
HMGB3P1-201ENST00000393368 C11orf86A6NJI1 115 aa4.75□□□□□ -1.65
HMGB3P1-201ENST00000393368 KRTAP29-1A8MX34 341 aaPredicted RBP4.75□□□□□ -1.65
HMGB3P1-201ENST00000393368 NDUFC2-KCTD14E9PQ53 114 aa4.75□□□□□ -1.65
HMGB3P1-201ENST00000393368 F8VRH5 84 aa4.75□□□□□ -1.65
HMGB3P1-201ENST00000393368 NUPR1O60356 82 aa4.75□□□□□ -1.65
HMGB3P1-201ENST00000393368 ATP5LO75964 103 aa4.75□□□□□ -1.65
HMGB3P1-201ENST00000393368 XAGE1AQ9HD64 81 aa4.75□□□□□ -1.65
HMGB3P1-201ENST00000393368 CHTOPQ9Y3Y2 248 aaKnown RBP4.75□□□□□ -1.65
HMGB3P1-201ENST00000393368 DMBT1Q9UGM3 2413 aaPredicted RBP4.74□□□□□ -1.65
HMGB3P1-201ENST00000393368 H0Y8G0 127 aa4.74□□□□□ -1.65
HMGB3P1-201ENST00000393368 H3BRM9 83 aa4.74□□□□□ -1.65
HMGB3P1-201ENST00000393368 HSBP1O75506 76 aa4.74□□□□□ -1.65
HMGB3P1-201ENST00000393368 SERF1AO75920 110 aa4.74□□□□□ -1.65
HMGB3P1-201ENST00000393368 TMEM170BQ5T4T1 132 aa4.74□□□□□ -1.65
HMGB3P1-201ENST00000393368 SERTAD4-AS1Q5TG53 156 aa4.74□□□□□ -1.65
HMGB3P1-201ENST00000393368 KRTAP19-1Q8IUB9 90 aa4.74□□□□□ -1.65
HMGB3P1-201ENST00000393368 IFI27L1Q96BM0 104 aa4.74□□□□□ -1.65
HMGB3P1-201ENST00000393368 PSORS1C2Q9UIG4 136 aa4.74□□□□□ -1.65
HMGB3P1-201ENST00000393368 HMCN2Q8NDA2 5059 aa4.74□□□□□ -1.65
HMGB3P1-201ENST00000393368 IGLV5-39A0A0G2JS06 123 aa4.73□□□□□ -1.65
HMGB3P1-201ENST00000393368 M0QXV9 152 aa4.73□□□□□ -1.65
HMGB3P1-201ENST00000393368 C1orf137Q5JT78 98 aa4.73□□□□□ -1.65
HMGB3P1-201ENST00000393368 FABP4P15090 132 aa4.72□□□□□ -1.65
HMGB3P1-201ENST00000393368 CXCL5P42830 114 aa4.72□□□□□ -1.65
HMGB3P1-201ENST00000393368 CTAG1AP78358 180 aa4.72□□□□□ -1.65
HMGB3P1-201ENST00000393368 ZNF625Q96I27 306 aaPredicted RBP4.72□□□□□ -1.65
HMGB3P1-201ENST00000393368 OXTP01178 125 aa4.71□□□□□ -1.66
HMGB3P1-201ENST00000393368 PFN2P35080 140 aa4.71□□□□□ -1.66
HMGB3P1-201ENST00000393368 UBE2BP63146 152 aa4.71□□□□□ -1.66
HMGB3P1-201ENST00000393368 C22orf24Q9Y442 160 aa4.71□□□□□ -1.66
HMGB3P1-201ENST00000393368 TRAV12-1A0A0B4J245 112 aa4.7□□□□□ -1.66
HMGB3P1-201ENST00000393368 TMEM223A0PJW6 202 aa4.7□□□□□ -1.66
HMGB3P1-201ENST00000393368 LEPROTL1O95214 131 aa4.7□□□□□ -1.66
HMGB3P1-201ENST00000393368 MT1HL1P0DM35 61 aa4.7□□□□□ -1.66
HMGB3P1-201ENST00000393368 SRSF9Q13242 221 aaKnown RBP eCLIP4.7□□□□□ -1.66
HMGB3P1-201ENST00000393368 PMCHL2Q9BQD1 86 aa4.7□□□□□ -1.66
HMGB3P1-201ENST00000393368 A0A0U1RRA0 63 aa4.69□□□□□ -1.66
HMGB3P1-201ENST00000393368 GAGE10A6NGK3 116 aa4.69□□□□□ -1.66
HMGB3P1-201ENST00000393368 HIST1H2BKO60814 126 aa4.69□□□□□ -1.66
HMGB3P1-201ENST00000393368 HIST1H2BJP06899 126 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms