RNA–Protein interactions for RNA: ENST00000388090.1

SNORA40-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 126 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40-201ENST00000388090 MYOM1P52179 1685 aa-4.49□□□□□ -3.13
SNORA40-201ENST00000388090 EIF3AQ14152 1382 aaKnown RBP-4.5□□□□□ -3.13
SNORA40-201ENST00000388090 TET3O43151 1660 aa-4.5□□□□□ -3.13
SNORA40-201ENST00000388090 NCS1P62166 190 aa-4.5□□□□□ -3.13
SNORA40-201ENST00000388090 HOPXQ9BPY8 73 aaPredicted RBP-4.5□□□□□ -3.13
SNORA40-201ENST00000388090 PRO1933Q9H354 126 aa-4.5□□□□□ -3.13
SNORA40-201ENST00000388090 FAIMQ9NVQ4 179 aa-4.5□□□□□ -3.13
SNORA40-201ENST00000388090 ARHGEF5Q12774 1597 aa-4.5□□□□□ -3.13
SNORA40-201ENST00000388090 ZNF518AQ6AHZ1 1483 aa-4.5□□□□□ -3.13
SNORA40-201ENST00000388090 PLEKHH2Q8IVE3 1493 aa-4.5□□□□□ -3.13
SNORA40-201ENST00000388090 TCTE3Q8IZS6 198 aa-4.51□□□□□ -3.13
SNORA40-201ENST00000388090 TMEM35BQ8NCS4 154 aa-4.51□□□□□ -3.13
SNORA40-201ENST00000388090 PSME4Q14997 1843 aa-4.51□□□□□ -3.13
SNORA40-201ENST00000388090 KRTAP20-1Q3LI63 56 aa-4.52□□□□□ -3.13
SNORA40-201ENST00000388090 MRPL54Q6P161 138 aaKnown RBP-4.52□□□□□ -3.13
SNORA40-201ENST00000388090 MT1MQ8N339 61 aa-4.52□□□□□ -3.13
SNORA40-201ENST00000388090 NXT2Q9NPJ8 142 aaKnown RBP-4.52□□□□□ -3.13
SNORA40-201ENST00000388090 KIAA1551Q9HCM1 1747 aa-4.52□□□□□ -3.13
SNORA40-201ENST00000388090 A0A087WVE0 104 aa-4.53□□□□□ -3.13
SNORA40-201ENST00000388090 LOC285095A0A1B0GVY8 99 aa-4.53□□□□□ -3.13
SNORA40-201ENST00000388090 SCTP09683 121 aa-4.53□□□□□ -3.13
SNORA40-201ENST00000388090 PSMG3Q9BT73 122 aaPredicted RBP-4.53□□□□□ -3.13
SNORA40-201ENST00000388090 ANKRD30AQ9BXX3 1397 aa-4.53□□□□□ -3.14
SNORA40-201ENST00000388090 ALKQ9UM73 1620 aa-4.54□□□□□ -3.14
SNORA40-201ENST00000388090 NLRP1Q9C000 1473 aa-4.54□□□□□ -3.14
SNORA40-201ENST00000388090 TNFSF15O95150 251 aa-4.54□□□□□ -3.14
SNORA40-201ENST00000388090 MRPS25P82663 173 aaKnown RBP-4.54□□□□□ -3.14
SNORA40-201ENST00000388090 CLIP1P30622 1438 aa-4.55□□□□□ -3.14
SNORA40-201ENST00000388090 MBD5Q9P267 1494 aa-4.55□□□□□ -3.14
SNORA40-201ENST00000388090 A0A1B0GU69 56 aa-4.55□□□□□ -3.14
SNORA40-201ENST00000388090 FAM236AA0A1B0GUQ0 79 aa-4.55□□□□□ -3.14
SNORA40-201ENST00000388090 FAM236BA0A1B0GV22 79 aa-4.55□□□□□ -3.14
SNORA40-201ENST00000388090 HIST1H1DP16402 221 aaKnown RBP-4.55□□□□□ -3.14
SNORA40-201ENST00000388090 TOMM20LQ6UXN7 152 aa-4.55□□□□□ -3.14
SNORA40-201ENST00000388090 TPT1P8Q9HAU6 139 aa-4.55□□□□□ -3.14
SNORA40-201ENST00000388090 COPZ2Q9P299 210 aa-4.55□□□□□ -3.14
SNORA40-201ENST00000388090 HIGD1AQ9Y241 93 aa-4.55□□□□□ -3.14
SNORA40-201ENST00000388090 SPENQ96T58 3664 aaKnown RBP-4.56□□□□□ -3.14
SNORA40-201ENST00000388090 H7BZZ5 65 aa-4.56□□□□□ -3.14
SNORA40-201ENST00000388090 HIST1H1AQ02539 215 aaPredicted RBP-4.56□□□□□ -3.14
SNORA40-201ENST00000388090 WHAMMP3Q1A5X7 153 aa-4.56□□□□□ -3.14
SNORA40-201ENST00000388090 TSLPQ969D9 159 aa-4.56□□□□□ -3.14
SNORA40-201ENST00000388090 ATPIF1Q9UII2 106 aa-4.56□□□□□ -3.14
SNORA40-201ENST00000388090 CDK5RAP2Q96SN8 1893 aa-4.56□□□□□ -3.14
SNORA40-201ENST00000388090 MT2AP02795 61 aa-4.57□□□□□ -3.14
SNORA40-201ENST00000388090 MT1BP07438 61 aa-4.57□□□□□ -3.14
SNORA40-201ENST00000388090 TRAV36DV7A0A075B6V5 113 aa-4.58□□□□□ -3.14
SNORA40-201ENST00000388090 SAMD13Q5VXD3 122 aa-4.58□□□□□ -3.14
SNORA40-201ENST00000388090 C5orf38Q86SI9 138 aa-4.58□□□□□ -3.14
SNORA40-201ENST00000388090 FAM223AQ8IWN6 122 aa-4.58□□□□□ -3.14
SNORA40-201ENST00000388090 EDC4Q6P2E9 1401 aaKnown RBP-4.58□□□□□ -3.14
SNORA40-201ENST00000388090 ATMQ13315 3056 aa-4.58□□□□□ -3.14
SNORA40-201ENST00000388090 LRRC37AA6NMS7 1700 aa-4.58□□□□□ -3.14
SNORA40-201ENST00000388090 TMEM128Q5BJH2 165 aa-4.59□□□□□ -3.14
SNORA40-201ENST00000388090 MYOZ3Q8TDC0 251 aa-4.6□□□□□ -3.15
SNORA40-201ENST00000388090 ANKRD36A6QL64 1941 aa-4.61□□□□□ -3.15
SNORA40-201ENST00000388090 TMEM191AQ9H0A3 160 aa-4.61□□□□□ -3.15
SNORA40-201ENST00000388090 V9GYQ6 96 aa-4.61□□□□□ -3.15
SNORA40-201ENST00000388090 ADGRG4Q8IZF6 3080 aa-4.61□□□□□ -3.15
SNORA40-201ENST00000388090 A0A1B0GX51 115 aa-4.62□□□□□ -3.15
SNORA40-201ENST00000388090 SNCAP37840 140 aa-4.62□□□□□ -3.15
SNORA40-201ENST00000388090 RGPD2P0DJD1 1756 aa-4.63□□□□□ -3.15
SNORA40-201ENST00000388090 PRLHP81277 87 aa-4.63□□□□□ -3.15
SNORA40-201ENST00000388090 TRIQKQ629K1 86 aa-4.63□□□□□ -3.15
SNORA40-201ENST00000388090 MMGT1Q8N4V1 131 aa-4.63□□□□□ -3.15
SNORA40-201ENST00000388090 ARL2-SNX15V9GYD0 113 aa-4.63□□□□□ -3.15
SNORA40-201ENST00000388090 PDCD11Q14690 1871 aaKnown RBP-4.63□□□□□ -3.15
SNORA40-201ENST00000388090 NUP188Q5SRE5 1749 aa-4.63□□□□□ -3.15
SNORA40-201ENST00000388090 SPEF2Q9C093 1822 aa-4.64□□□□□ -3.15
SNORA40-201ENST00000388090 SMG6Q86US8 1419 aaKnown RBP-4.64□□□□□ -3.15
SNORA40-201ENST00000388090 ROCK1Q13464 1354 aa-4.65□□□□□ -3.15
SNORA40-201ENST00000388090 IGLC6P0CF74 106 aa-4.65□□□□□ -3.15
SNORA40-201ENST00000388090 SCN7AQ01118 1682 aa-4.66□□□□□ -3.16
SNORA40-201ENST00000388090 ADGRL2O95490 1459 aa-4.66□□□□□ -3.16
SNORA40-201ENST00000388090 PIGBOS1A0A0B4J2F0 54 aa-4.66□□□□□ -3.16
SNORA40-201ENST00000388090 SPTY2D1-AS1A0A0U1RR47 76 aa-4.66□□□□□ -3.16
SNORA40-201ENST00000388090 TFAMQ00059 246 aaKnown RBP-4.66□□□□□ -3.16
SNORA40-201ENST00000388090 GID8Q9NWU2 228 aa-4.66□□□□□ -3.16
SNORA40-201ENST00000388090 C4AP0C0L4 1744 aa-4.66□□□□□ -3.16
SNORA40-201ENST00000388090 C4BP0C0L5 1744 aa-4.66□□□□□ -3.16
SNORA40-201ENST00000388090 CLPSL2Q6UWE3 100 aa-4.67□□□□□ -3.16
SNORA40-201ENST00000388090 C6orf201Q7Z4U5 140 aa-4.67□□□□□ -3.16
SNORA40-201ENST00000388090 CHKB-CPT1BH3BT56 60 aa-4.68□□□□□ -3.16
SNORA40-201ENST00000388090 PCBD2Q9H0N5 130 aa-4.68□□□□□ -3.16
SNORA40-201ENST00000388090 MGAQ8IWI9 3026 aa-4.69□□□□□ -3.16
SNORA40-201ENST00000388090 EHBP1L1Q8N3D4 1523 aa-4.7□□□□□ -3.16
SNORA40-201ENST00000388090 TMEM238C9JI98 176 aa-4.7□□□□□ -3.16
SNORA40-201ENST00000388090 A0A1B0GWA3 101 aa-4.71□□□□□ -3.16
SNORA40-201ENST00000388090 NEFHP12036 1026 aa-4.71□□□□□ -3.16
SNORA40-201ENST00000388090 LINC00846Q9NV44 126 aa-4.71□□□□□ -3.16
SNORA40-201ENST00000388090 C9orf153Q5TBE3 101 aa-4.72□□□□□ -3.17
SNORA40-201ENST00000388090 OVOS2A0A0J9YW53 1432 aa-4.73□□□□□ -3.17
SNORA40-201ENST00000388090 OVOS2Q6IE36 1432 aa-4.73□□□□□ -3.17
SNORA40-201ENST00000388090 SAA2P0DJI9 122 aaPredicted RBP-4.74□□□□□ -3.17
SNORA40-201ENST00000388090 LINC00694P0DN24 101 aa-4.74□□□□□ -3.17
SNORA40-201ENST00000388090 MORN2Q502X0 79 aa-4.74□□□□□ -3.17
SNORA40-201ENST00000388090 NMSQ5H8A3 153 aa-4.74□□□□□ -3.17
SNORA40-201ENST00000388090 MAPKBP1O60336 1514 aa-4.74□□□□□ -3.17
SNORA40-201ENST00000388090 NDUFA3O95167 84 aa-4.75□□□□□ -3.17
SNORA40-201ENST00000388090 SCN11AQ9UI33 1791 aa-4.76□□□□□ -3.17
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms