RNA–Protein interactions for RNA: ENST00000384254.1

RNU6-40P-201, Transcript of RNA, U6 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU6-40P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-40P-201ENST00000384254 WDFY4Q6ZS81 3184 aa-0.03□□□□□ -2.41
RNU6-40P-201ENST00000384254 EPG5Q9HCE0 2579 aa-0.03□□□□□ -2.41
RNU6-40P-201ENST00000384254 GOLGA4Q13439 2230 aaKnown RBP-0.04□□□□□ -2.42
RNU6-40P-201ENST00000384254 HERC2O95714 4834 aa-0.05□□□□□ -2.42
RNU6-40P-201ENST00000384254 TRBV7-4A0A0J9YYF1 115 aa-0.05□□□□□ -2.42
RNU6-40P-201ENST00000384254 TNRC18O15417 2968 aaPredicted RBP-0.05□□□□□ -2.42
RNU6-40P-201ENST00000384254 CHD6Q8TD26 2715 aa-0.05□□□□□ -2.42
RNU6-40P-201ENST00000384254 ATRQ13535 2644 aa-0.05□□□□□ -2.42
RNU6-40P-201ENST00000384254 TGP01266 2768 aa-0.06□□□□□ -2.42
RNU6-40P-201ENST00000384254 DNHD1Q96M86 4753 aa-0.06□□□□□ -2.42
RNU6-40P-201ENST00000384254 GCN1Q92616 2671 aaKnown RBP-0.06□□□□□ -2.42
RNU6-40P-201ENST00000384254 BIRC6Q9NR09 4857 aa-0.06□□□□□ -2.42
RNU6-40P-201ENST00000384254 FLNCQ14315 2725 aa-0.07□□□□□ -2.42
RNU6-40P-201ENST00000384254 MAGI1Q96QZ7 1491 aaPredicted RBP-0.07□□□□□ -2.42
RNU6-40P-201ENST00000384254 SAA2P0DJI9 122 aaPredicted RBP-0.07□□□□□ -2.42
RNU6-40P-201ENST00000384254 HSD52Q0P140 79 aa-0.07□□□□□ -2.42
RNU6-40P-201ENST00000384254 DEFB123Q8N688 67 aa-0.07□□□□□ -2.42
RNU6-40P-201ENST00000384254 DSPP15924 2871 aaKnown RBP-0.08□□□□□ -2.42
RNU6-40P-201ENST00000384254 TSC2P49815 1807 aa-0.08□□□□□ -2.42
RNU6-40P-201ENST00000384254 CSMD3Q7Z407 3707 aa-0.08□□□□□ -2.42
RNU6-40P-201ENST00000384254 TMEM262E9PQX1 116 aa-0.08□□□□□ -2.42
RNU6-40P-201ENST00000384254 LINC01600Q96MT4 127 aa-0.08□□□□□ -2.42
RNU6-40P-201ENST00000384254 DIP2CQ9Y2E4 1556 aa-0.08□□□□□ -2.42
RNU6-40P-201ENST00000384254 ITPR3Q14573 2671 aa-0.09□□□□□ -2.42
RNU6-40P-201ENST00000384254 TOP2BQ02880 1626 aa-0.09□□□□□ -2.42
RNU6-40P-201ENST00000384254 SPHKAPQ2M3C7 1700 aa-0.09□□□□□ -2.42
RNU6-40P-201ENST00000384254 FAM223BA6NKX1 122 aa-0.09□□□□□ -2.42
RNU6-40P-201ENST00000384254 MAP1AP78559 2803 aaPredicted RBP-0.09□□□□□ -2.42
RNU6-40P-201ENST00000384254 MXRA5Q9NR99 2828 aa-0.09□□□□□ -2.42
RNU6-40P-201ENST00000384254 CELSR3Q9NYQ7 3312 aa-0.1□□□□□ -2.42
RNU6-40P-201ENST00000384254 TLN1Q9Y490 2541 aaKnown RBP-0.1□□□□□ -2.42
RNU6-40P-201ENST00000384254 SPTBN1Q01082 2364 aaKnown RBP-0.1□□□□□ -2.42
RNU6-40P-201ENST00000384254 KRTAP6-1Q3LI64 71 aa-0.1□□□□□ -2.43
RNU6-40P-201ENST00000384254 CGREF1Q99674 301 aa-0.1□□□□□ -2.43
RNU6-40P-201ENST00000384254 GAPVD1Q14C86 1478 aa-0.1□□□□□ -2.43
RNU6-40P-201ENST00000384254 SPRR1BP22528 89 aa-0.11□□□□□ -2.43
RNU6-40P-201ENST00000384254 SEC11AP67812 179 aa-0.11□□□□□ -2.43
RNU6-40P-201ENST00000384254 UTP20O75691 2785 aaKnown RBP-0.11□□□□□ -2.43
RNU6-40P-201ENST00000384254 SRRM2Q9UQ35 2752 aaKnown RBP-0.11□□□□□ -2.43
RNU6-40P-201ENST00000384254 NBEAL1Q6ZS30 2694 aa-0.12□□□□□ -2.43
RNU6-40P-201ENST00000384254 S100PP25815 95 aa-0.12□□□□□ -2.43
RNU6-40P-201ENST00000384254 VAMP8Q9BV40 100 aa-0.12□□□□□ -2.43
RNU6-40P-201ENST00000384254 ADGRL2O95490 1459 aa-0.12□□□□□ -2.43
RNU6-40P-201ENST00000384254 CFAP46Q8IYW2 2715 aa-0.12□□□□□ -2.43
RNU6-40P-201ENST00000384254 PKD1L1Q8TDX9 2849 aa-0.12□□□□□ -2.43
RNU6-40P-201ENST00000384254 PRRC2CQ9Y520 2896 aaKnown RBP-0.12□□□□□ -2.43
RNU6-40P-201ENST00000384254 DCHS1Q96JQ0 3298 aa-0.12□□□□□ -2.43
RNU6-40P-201ENST00000384254 CC2D2AQ9P2K1 1620 aa-0.13□□□□□ -2.43
RNU6-40P-201ENST00000384254 SCN7AQ01118 1682 aa-0.13□□□□□ -2.43
RNU6-40P-201ENST00000384254 K7EQZ3 153 aa-0.13□□□□□ -2.43
RNU6-40P-201ENST00000384254 LRP2P98164 4655 aa-0.13□□□□□ -2.43
RNU6-40P-201ENST00000384254 NCOA3Q9Y6Q9 1424 aa-0.13□□□□□ -2.43
RNU6-40P-201ENST00000384254 EP400Q96L91 3159 aa-0.14□□□□□ -2.43
RNU6-40P-201ENST00000384254 KALRNO60229 2985 aa-0.14□□□□□ -2.43
RNU6-40P-201ENST00000384254 SETBP1Q9Y6X0 1596 aa-0.14□□□□□ -2.43
RNU6-40P-201ENST00000384254 C1orf167Q5SNV9 1468 aa-0.14□□□□□ -2.43
RNU6-40P-201ENST00000384254 LAMA2P24043 3122 aaKnown RBP-0.14□□□□□ -2.43
RNU6-40P-201ENST00000384254 TNXBP22105 4242 aa-0.14□□□□□ -2.43
RNU6-40P-201ENST00000384254 LINC00959A0A1B0GUT2 108 aa-0.14□□□□□ -2.43
RNU6-40P-201ENST00000384254 hADV29S1A0JD25 119 aa-0.14□□□□□ -2.43
RNU6-40P-201ENST00000384254 MT4P47944 62 aa-0.14□□□□□ -2.43
RNU6-40P-201ENST00000384254 KRTAP19-6Q3LI70 58 aa-0.14□□□□□ -2.43
RNU6-40P-201ENST00000384254 LINC00846Q9NV44 126 aa-0.14□□□□□ -2.43
RNU6-40P-201ENST00000384254 FLNBO75369 2602 aaKnown RBP-0.14□□□□□ -2.43
RNU6-40P-201ENST00000384254 TULP4Q9NRJ4 1543 aa-0.14□□□□□ -2.43
RNU6-40P-201ENST00000384254 PCNX1Q96RV3 2341 aa-0.14□□□□□ -2.43
RNU6-40P-201ENST00000384254 CEP295Q9C0D2 2601 aa-0.15□□□□□ -2.43
RNU6-40P-201ENST00000384254 MRC2Q9UBG0 1479 aa-0.15□□□□□ -2.43
RNU6-40P-201ENST00000384254 TEX15Q9BXT5 2789 aa-0.15□□□□□ -2.43
RNU6-40P-201ENST00000384254 PIEZO2Q9H5I5 2752 aa-0.15□□□□□ -2.43
RNU6-40P-201ENST00000384254 FXYD6Q9H0Q3 95 aa-0.15□□□□□ -2.43
RNU6-40P-201ENST00000384254 UNC80Q8N2C7 3258 aa-0.15□□□□□ -2.43
RNU6-40P-201ENST00000384254 SYS1-DBNDD2H3BUS1 97 aa-0.16□□□□□ -2.44
RNU6-40P-201ENST00000384254 SPINK4O60575 86 aa-0.16□□□□□ -2.44
RNU6-40P-201ENST00000384254 USMG5Q96IX5 58 aa-0.16□□□□□ -2.44
RNU6-40P-201ENST00000384254 TCEAL7Q9BRU2 100 aa-0.16□□□□□ -2.44
RNU6-40P-201ENST00000384254 NUP188Q5SRE5 1749 aa-0.16□□□□□ -2.44
RNU6-40P-201ENST00000384254 PDCD11Q14690 1871 aaKnown RBP-0.16□□□□□ -2.44
RNU6-40P-201ENST00000384254 WDR87Q6ZQQ6 2873 aa-0.16□□□□□ -2.44
RNU6-40P-201ENST00000384254 NF1P21359 2839 aa-0.17□□□□□ -2.44
RNU6-40P-201ENST00000384254 NDUFC1O43677 76 aa-0.17□□□□□ -2.44
RNU6-40P-201ENST00000384254 LAMA1P25391 3075 aa-0.17□□□□□ -2.44
RNU6-40P-201ENST00000384254 KMT2AQ03164 3969 aa-0.17□□□□□ -2.44
RNU6-40P-201ENST00000384254 NIPBLQ6KC79 2804 aaeCLIP-0.17□□□□□ -2.44
RNU6-40P-201ENST00000384254 TACC2O95359 2948 aa-0.17□□□□□ -2.44
RNU6-40P-201ENST00000384254 MYO15AQ9UKN7 3530 aa-0.18□□□□□ -2.44
RNU6-40P-201ENST00000384254 ABCA3Q99758 1704 aa-0.18□□□□□ -2.44
RNU6-40P-201ENST00000384254 BOD1L1Q8NFC6 3051 aa-0.18□□□□□ -2.44
RNU6-40P-201ENST00000384254 SPG11Q96JI7 2443 aa-0.18□□□□□ -2.44
RNU6-40P-201ENST00000384254 COX8AP10176 69 aa-0.18□□□□□ -2.44
RNU6-40P-201ENST00000384254 LCN9Q8WX39 176 aa-0.18□□□□□ -2.44
RNU6-40P-201ENST00000384254 TOPAZ1Q8N9V7 1692 aa-0.18□□□□□ -2.44
RNU6-40P-201ENST00000384254 CHD1O14646 1710 aa-0.18□□□□□ -2.44
RNU6-40P-201ENST00000384254 TMEM218A2RU14 115 aa-0.19□□□□□ -2.44
RNU6-40P-201ENST00000384254 GNGT2O14610 69 aa-0.19□□□□□ -2.44
RNU6-40P-201ENST00000384254 SPRR2DP22532 72 aa-0.19□□□□□ -2.44
RNU6-40P-201ENST00000384254 A0A0C4DFX4 3053 aa-0.19□□□□□ -2.44
RNU6-40P-201ENST00000384254 ITPR2Q14571 2701 aa-0.19□□□□□ -2.44
RNU6-40P-201ENST00000384254 STARD9Q9P2P6 4700 aa-0.19□□□□□ -2.44
RNU6-40P-201ENST00000384254 GVINP1Q7Z2Y8 2422 aa-0.19□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms