RNA–Protein interactions for RNA: ENST00000383282.3

NPHP3-202, Transcript of nephrocystin 3, humanhuman

TSL 1 (best) BASIC

Gene NPHP3, Length 782 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-202ENST00000383282 ERASQ7Z444 233 aa16.19■□□□□ 0.18
NPHP3-202ENST00000383282 CHCHD1Q96BP2 118 aaKnown RBP16.19■□□□□ 0.18
NPHP3-202ENST00000383282 VCX2Q9H322 139 aa16.19■□□□□ 0.18
NPHP3-202ENST00000383282 HBDP02042 147 aa16.18■□□□□ 0.18
NPHP3-202ENST00000383282 PMCHL1Q16048 86 aa16.17■□□□□ 0.18
NPHP3-202ENST00000383282 FAM104AQ969W3 186 aa16.17■□□□□ 0.18
NPHP3-202ENST00000383282 HSBP1O75506 76 aa16.15■□□□□ 0.18
NPHP3-202ENST00000383282 TLX1NBP0CAT3 122 aa16.13■□□□□ 0.17
NPHP3-202ENST00000383282 DIRC1Q969H9 104 aa16.13■□□□□ 0.17
NPHP3-202ENST00000383282 A0A087WZ39 114 aa16.12■□□□□ 0.17
NPHP3-202ENST00000383282 IGLV7-43P04211 117 aa16.12■□□□□ 0.17
NPHP3-202ENST00000383282 C10orf25Q5T742 122 aa16.12■□□□□ 0.17
NPHP3-202ENST00000383282 ZC2HC1BQ5TFG8 222 aa16.12■□□□□ 0.17
NPHP3-202ENST00000383282 AMELXQ99217 191 aa16.12■□□□□ 0.17
NPHP3-202ENST00000383282 A0A096LNJ9 63 aa16.11■□□□□ 0.17
NPHP3-202ENST00000383282 UNQ6190/PRO20217Q6UXQ8 127 aa16.11■□□□□ 0.17
NPHP3-202ENST00000383282 SERF1AO75920 110 aa16.1■□□□□ 0.17
NPHP3-202ENST00000383282 LINC00173Q6ZV60 143 aa16.1■□□□□ 0.17
NPHP3-202ENST00000383282 C6orf48Q9UBA6 75 aa16.1■□□□□ 0.17
NPHP3-202ENST00000383282 FAM168BA1KXE4 195 aa16.09■□□□□ 0.17
NPHP3-202ENST00000383282 ATP5LO75964 103 aa16.09■□□□□ 0.17
NPHP3-202ENST00000383282 UBE2D1P51668 147 aa16.09■□□□□ 0.17
NPHP3-202ENST00000383282 GAGE2EQ4V326 116 aa16.09■□□□□ 0.17
NPHP3-202ENST00000383282 FAM19A5Q7Z5A7 132 aaPredicted RBP16.09■□□□□ 0.17
NPHP3-202ENST00000383282 GAGE2DQ9UEU5 116 aa16.09■□□□□ 0.17
NPHP3-202ENST00000383282 HIST1H2BKO60814 126 aa16.07■□□□□ 0.16
NPHP3-202ENST00000383282 HIST1H2BJP06899 126 aa16.07■□□□□ 0.16
NPHP3-202ENST00000383282 HIST1H2BOP23527 126 aa16.07■□□□□ 0.16
NPHP3-202ENST00000383282 HIST1H2BBP33778 126 aa16.07■□□□□ 0.16
NPHP3-202ENST00000383282 NDUFA6P56556 154 aa16.07■□□□□ 0.16
NPHP3-202ENST00000383282 HIST1H2BDP58876 126 aa16.07■□□□□ 0.16
NPHP3-202ENST00000383282 HIST1H2BCP62807 126 aa16.07■□□□□ 0.16
NPHP3-202ENST00000383282 HIST2H2BEQ16778 126 aa16.07■□□□□ 0.16
NPHP3-202ENST00000383282 PDZD11Q5EBL8 140 aa16.07■□□□□ 0.16
NPHP3-202ENST00000383282 HIST2H2BFQ5QNW6 126 aaPredicted RBP16.07■□□□□ 0.16
NPHP3-202ENST00000383282 HIST1H2BHQ93079 126 aa16.07■□□□□ 0.16
NPHP3-202ENST00000383282 HIST1H2BNQ99877 126 aa16.07■□□□□ 0.16
NPHP3-202ENST00000383282 HIST1H2BMQ99879 126 aa16.07■□□□□ 0.16
NPHP3-202ENST00000383282 SEC11AP67812 179 aa16.06■□□□□ 0.16
NPHP3-202ENST00000383282 PMVKQ15126 192 aa16.06■□□□□ 0.16
NPHP3-202ENST00000383282 FAM19A2Q8N3H0 131 aa16.06■□□□□ 0.16
NPHP3-202ENST00000383282 LINC00242Q5T6M2 205 aa16.05■□□□□ 0.16
NPHP3-202ENST00000383282 TRBV30A0A0K0K1B3 111 aa16.04■□□□□ 0.16
NPHP3-202ENST00000383282 H0Y9J4 135 aa16.04■□□□□ 0.16
NPHP3-202ENST00000383282 KIAA0087Q14695 138 aa16.04■□□□□ 0.16
NPHP3-202ENST00000383282 PRR26Q8N8Z3 221 aa16.04■□□□□ 0.16
NPHP3-202ENST00000383282 GEMIN7Q9H840 131 aaKnown RBP16.04■□□□□ 0.16
NPHP3-202ENST00000383282 UBE2BP63146 152 aa16.03■□□□□ 0.16
NPHP3-202ENST00000383282 PACRGQ96M98 296 aaPredicted RBP16.03■□□□□ 0.16
NPHP3-202ENST00000383282 CST9LQ9H4G1 147 aa16.03■□□□□ 0.16
NPHP3-202ENST00000383282 M0QXV9 152 aa16.02■□□□□ 0.16
NPHP3-202ENST00000383282 LINC00310P59036 64 aa16.02■□□□□ 0.16
NPHP3-202ENST00000383282 HERVK_113P63121 156 aa16.01■□□□□ 0.15
NPHP3-202ENST00000383282 KRTAP11-1Q8IUC1 163 aa16.01■□□□□ 0.15
NPHP3-202ENST00000383282 IFI27L1Q96BM0 104 aa16.01■□□□□ 0.15
NPHP3-202ENST00000383282 NDUFC2-KCTD14E9PQ53 114 aa15.99■□□□□ 0.15
NPHP3-202ENST00000383282 LEPROTL1O95214 131 aa15.99■□□□□ 0.15
NPHP3-202ENST00000383282 FAM19A3Q7Z5A8 133 aa15.99■□□□□ 0.15
NPHP3-202ENST00000383282 IGLV1-50A0A075B6I6 118 aa15.98■□□□□ 0.15
NPHP3-202ENST00000383282 NUPR1O60356 82 aa15.98■□□□□ 0.15
NPHP3-202ENST00000383282 C2orf82Q6UX34 121 aa15.98■□□□□ 0.15
NPHP3-202ENST00000383282 LINC01561Q8N1V8 128 aa15.98■□□□□ 0.15
NPHP3-202ENST00000383282 TINCRA0A1B0GVN0 87 aa15.96■□□□□ 0.15
NPHP3-202ENST00000383282 KRTAP7-1Q8IUC3 87 aa15.96■□□□□ 0.15
NPHP3-202ENST00000383282 LINC00469Q8N7U9 141 aa15.96■□□□□ 0.15
NPHP3-202ENST00000383282 HSPB8Q9UJY1 196 aa15.96■□□□□ 0.15
NPHP3-202ENST00000383282 PRSS2P07478 247 aa15.95■□□□□ 0.14
NPHP3-202ENST00000383282 FABP4P15090 132 aa15.94■□□□□ 0.14
NPHP3-202ENST00000383282 C9orf129Q5T035 196 aaKnown RBP15.93■□□□□ 0.14
NPHP3-202ENST00000383282 CDKN2A-AS1Q9UH64 79 aa15.93■□□□□ 0.14
NPHP3-202ENST00000383282 H0Y8G0 127 aa15.92■□□□□ 0.14
NPHP3-202ENST00000383282 LPAP08519 4548 aa15.92■□□□□ 0.14
NPHP3-202ENST00000383282 CKS1BP61024 79 aa15.91■□□□□ 0.14
NPHP3-202ENST00000383282 TOMM7Q9P0U1 55 aa15.91■□□□□ 0.14
NPHP3-202ENST00000383282 CHTOPQ9Y3Y2 248 aaKnown RBP15.91■□□□□ 0.14
NPHP3-202ENST00000383282 TRAV12-1A0A0B4J245 112 aa15.9■□□□□ 0.14
NPHP3-202ENST00000383282 KRTAP1-4P0C5Y4 121 aa15.9■□□□□ 0.14
NPHP3-202ENST00000383282 IGLC3P0DOY3 106 aa15.9■□□□□ 0.14
NPHP3-202ENST00000383282 H3BRM9 83 aa15.89■□□□□ 0.13
NPHP3-202ENST00000383282 RPL13AP40429 203 aaKnown RBP15.89■□□□□ 0.13
NPHP3-202ENST00000383282 C6orf226Q5I0X4 101 aa15.89■□□□□ 0.13
NPHP3-202ENST00000383282 COA6Q5JTJ3 125 aaKnown RBP15.89■□□□□ 0.13
NPHP3-202ENST00000383282 IGLV5-45A0A087WSX0 123 aa15.87■□□□□ 0.13
NPHP3-202ENST00000383282 Q8IZM0 81 aa15.87■□□□□ 0.13
NPHP3-202ENST00000383282 MAP1LC3CQ9BXW4 147 aa15.86■□□□□ 0.13
NPHP3-202ENST00000383282 F8VRH5 84 aa15.84■□□□□ 0.13
NPHP3-202ENST00000383282 TMEM170BQ5T4T1 132 aa15.84■□□□□ 0.13
NPHP3-202ENST00000383282 C11orf86A6NJI1 115 aa15.83■□□□□ 0.12
NPHP3-202ENST00000383282 ZNF861PO60384 105 aa15.83■□□□□ 0.12
NPHP3-202ENST00000383282 SPINK8P0C7L1 97 aa15.83■□□□□ 0.12
NPHP3-202ENST00000383282 ZNF22P17026 224 aaPredicted RBP15.83■□□□□ 0.12
NPHP3-202ENST00000383282 LBHQ53QV2 105 aaPredicted RBP15.83■□□□□ 0.12
NPHP3-202ENST00000383282 C22orf24Q9Y442 160 aa15.83■□□□□ 0.12
NPHP3-202ENST00000383282 SMIM1B2RUZ4 78 aa15.82■□□□□ 0.12
NPHP3-202ENST00000383282 S100A6P06703 90 aa15.82■□□□□ 0.12
NPHP3-202ENST00000383282 XAGE1AQ9HD64 81 aa15.8■□□□□ 0.12
NPHP3-202ENST00000383282 PRR4Q16378 134 aa15.79■□□□□ 0.12
NPHP3-202ENST00000383282 CXCL5P42830 114 aa15.77■□□□□ 0.12
NPHP3-202ENST00000383282 COX7B2Q8TF08 81 aa15.77■□□□□ 0.12
NPHP3-202ENST00000383282 PLNP26678 52 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 106.1 ms