RNA–Protein interactions for RNA: ENST00000381535.4

SYNGR1-204, Transcript of synaptogyrin 1, humanhuman

TSL 1 (best) BASIC

Gene SYNGR1, Length 1,295 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR1-204ENST00000381535 CFAP161Q6P656 301 aa9.72□□□□□ -0.85
SYNGR1-204ENST00000381535 LITAFQ99732 161 aa9.72□□□□□ -0.85
SYNGR1-204ENST00000381535 CSMD3Q7Z407 3707 aa9.72□□□□□ -0.85
SYNGR1-204ENST00000381535 A6NDN8 102 aa9.71□□□□□ -0.86
SYNGR1-204ENST00000381535 MEIG1Q5JSS6 88 aa9.71□□□□□ -0.86
SYNGR1-204ENST00000381535 ADAMTSL4-AS1Q5T5F5 129 aa9.71□□□□□ -0.86
SYNGR1-204ENST00000381535 Q9HAA7 133 aa9.71□□□□□ -0.86
SYNGR1-204ENST00000381535 K7EP13 123 aa9.7□□□□□ -0.86
SYNGR1-204ENST00000381535 CKS1BP61024 79 aa9.7□□□□□ -0.86
SYNGR1-204ENST00000381535 SFTA2Q6UW10 78 aa9.7□□□□□ -0.86
SYNGR1-204ENST00000381535 MUSTN1Q8IVN3 82 aa9.7□□□□□ -0.86
SYNGR1-204ENST00000381535 SPANXDQ9BXN6 97 aa9.7□□□□□ -0.86
SYNGR1-204ENST00000381535 SPANXCQ9NY87 97 aa9.7□□□□□ -0.86
SYNGR1-204ENST00000381535 SACSQ9NZJ4 4579 aa9.7□□□□□ -0.86
SYNGR1-204ENST00000381535 A0A0U1RRA0 63 aa9.69□□□□□ -0.86
SYNGR1-204ENST00000381535 Q6ZVH6 145 aa9.69□□□□□ -0.86
SYNGR1-204ENST00000381535 RMI2Q96E14 147 aa9.69□□□□□ -0.86
SYNGR1-204ENST00000381535 J3QL48 77 aa9.68□□□□□ -0.86
SYNGR1-204ENST00000381535 SMIM13P0DJ93 91 aa9.68□□□□□ -0.86
SYNGR1-204ENST00000381535 CXCL5P42830 114 aa9.68□□□□□ -0.86
SYNGR1-204ENST00000381535 SPAG11BQ08648 103 aa9.68□□□□□ -0.86
SYNGR1-204ENST00000381535 C2orf82Q6UX34 121 aa9.68□□□□□ -0.86
SYNGR1-204ENST00000381535 DNAH1Q9P2D7 4330 aa9.66□□□□□ -0.86
SYNGR1-204ENST00000381535 STARD9Q9P2P6 4700 aa9.66□□□□□ -0.86
SYNGR1-204ENST00000381535 LCE6AA0A183 80 aa9.66□□□□□ -0.86
SYNGR1-204ENST00000381535 TMEM238LA0A1B0GVL6 79 aa9.66□□□□□ -0.86
SYNGR1-204ENST00000381535 A6NJY4 79 aa9.66□□□□□ -0.86
SYNGR1-204ENST00000381535 IFITM1P13164 125 aa9.66□□□□□ -0.86
SYNGR1-204ENST00000381535 LINC00158P58513 81 aa9.66□□□□□ -0.86
SYNGR1-204ENST00000381535 RPL24P83731 157 aaKnown RBP9.66□□□□□ -0.86
SYNGR1-204ENST00000381535 C6orf223Q8N319 242 aa9.66□□□□□ -0.86
SYNGR1-204ENST00000381535 DAND5Q8N907 189 aa9.66□□□□□ -0.86
SYNGR1-204ENST00000381535 NHP2Q9NX24 153 aaKnown RBP9.66□□□□□ -0.86
SYNGR1-204ENST00000381535 TAX1BP3O14907 124 aa9.65□□□□□ -0.86
SYNGR1-204ENST00000381535 LINC00526Q96FQ7 95 aa9.65□□□□□ -0.86
SYNGR1-204ENST00000381535 VPS13DQ5THJ4 4388 aa9.65□□□□□ -0.87
SYNGR1-204ENST00000381535 ZNF561-AS1K7EIQ3 104 aa9.64□□□□□ -0.87
SYNGR1-204ENST00000381535 NPC2P61916 151 aa9.64□□□□□ -0.87
SYNGR1-204ENST00000381535 UNQ6190/PRO20217Q6UXQ8 127 aa9.64□□□□□ -0.87
SYNGR1-204ENST00000381535 NTN5Q8WTR8 489 aaPredicted RBP9.64□□□□□ -0.87
SYNGR1-204ENST00000381535 LYSTQ99698 3801 aa9.64□□□□□ -0.87
SYNGR1-204ENST00000381535 ERG28Q9UKR5 140 aa9.64□□□□□ -0.87
SYNGR1-204ENST00000381535 RYR2Q92736 4967 aa9.63□□□□□ -0.87
SYNGR1-204ENST00000381535 A0A1B0GV90 55 aa9.63□□□□□ -0.87
SYNGR1-204ENST00000381535 A4D1N5 150 aa9.63□□□□□ -0.87
SYNGR1-204ENST00000381535 PFN2P35080 140 aa9.63□□□□□ -0.87
SYNGR1-204ENST00000381535 HIGD2BQ4VC39 106 aa9.63□□□□□ -0.87
SYNGR1-204ENST00000381535 C15orf56Q8N910 161 aa9.63□□□□□ -0.87
SYNGR1-204ENST00000381535 LINC00308Q8TCZ7 52 aa9.63□□□□□ -0.87
SYNGR1-204ENST00000381535 COPS9Q8WXC6 57 aa9.63□□□□□ -0.87
SYNGR1-204ENST00000381535 COX11Q9Y6N1 276 aa9.63□□□□□ -0.87
SYNGR1-204ENST00000381535 A0A1B0GWB2 263 aa9.62□□□□□ -0.87
SYNGR1-204ENST00000381535 K7ERJ3 54 aa9.62□□□□□ -0.87
SYNGR1-204ENST00000381535 C10orf25Q5T742 122 aa9.62□□□□□ -0.87
SYNGR1-204ENST00000381535 MIR7-3HGQ8N6C7 128 aa9.62□□□□□ -0.87
SYNGR1-204ENST00000381535 RAB37Q96AX2 223 aa9.62□□□□□ -0.87
SYNGR1-204ENST00000381535 KRTAP1-5Q9BYS1 174 aa9.62□□□□□ -0.87
SYNGR1-204ENST00000381535 NBDYA0A0U1RRE5 68 aa9.61□□□□□ -0.87
SYNGR1-204ENST00000381535 CFC1BP0CG36 223 aa9.61□□□□□ -0.87
SYNGR1-204ENST00000381535 CFC1P0CG37 223 aa9.61□□□□□ -0.87
SYNGR1-204ENST00000381535 C2orf48Q96LS8 159 aa9.61□□□□□ -0.87
SYNGR1-204ENST00000381535 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.6□□□□□ -0.87
SYNGR1-204ENST00000381535 EIF4EBP3O60516 100 aaPredicted RBP9.6□□□□□ -0.87
SYNGR1-204ENST00000381535 COX17Q14061 63 aa9.6□□□□□ -0.87
SYNGR1-204ENST00000381535 TTC32Q5I0X7 151 aa9.6□□□□□ -0.87
SYNGR1-204ENST00000381535 PGPEP1Q9NXJ5 209 aa9.6□□□□□ -0.87
SYNGR1-204ENST00000381535 GVQW2A0A096LPI5 108 aaPredicted RBP9.59□□□□□ -0.87
SYNGR1-204ENST00000381535 C9orf118A6NHY6 69 aa9.59□□□□□ -0.87
SYNGR1-204ENST00000381535 F8WDY8 70 aa9.59□□□□□ -0.87
SYNGR1-204ENST00000381535 C9orf116Q5BN46 136 aaPredicted RBP9.59□□□□□ -0.87
SYNGR1-204ENST00000381535 SOSTDC1Q6X4U4 206 aa9.59□□□□□ -0.87
SYNGR1-204ENST00000381535 CAMK2N2Q96S95 79 aa9.59□□□□□ -0.87
SYNGR1-204ENST00000381535 USP17L23D6RBM5 183 aa9.58□□□□□ -0.88
SYNGR1-204ENST00000381535 PPDPFQ9H3Y8 114 aa9.58□□□□□ -0.88
SYNGR1-204ENST00000381535 C6orf48Q9UBA6 75 aa9.57□□□□□ -0.88
SYNGR1-204ENST00000381535 A0A0B4J2C4 111 aa9.56□□□□□ -0.88
SYNGR1-204ENST00000381535 TRBV30A0A0K0K1B3 111 aa9.56□□□□□ -0.88
SYNGR1-204ENST00000381535 PSCAO43653 123 aa9.56□□□□□ -0.88
SYNGR1-204ENST00000381535 Q6ZRU5 148 aa9.56□□□□□ -0.88
SYNGR1-204ENST00000381535 PRO1854Q9UHT4 67 aa9.56□□□□□ -0.88
SYNGR1-204ENST00000381535 H3BUT2 72 aa9.55□□□□□ -0.88
SYNGR1-204ENST00000381535 SYCNQ0VAF6 134 aa9.55□□□□□ -0.88
SYNGR1-204ENST00000381535 M0R2N4 97 aa9.54□□□□□ -0.88
SYNGR1-204ENST00000381535 NAA38Q9BRA0 125 aaKnown RBP9.54□□□□□ -0.88
SYNGR1-204ENST00000381535 LOC107984156A0A0G2JMH3 177 aa9.53□□□□□ -0.88
SYNGR1-204ENST00000381535 LECT2O14960 151 aa9.53□□□□□ -0.88
SYNGR1-204ENST00000381535 ARL17AQ8IVW1 177 aa9.53□□□□□ -0.88
SYNGR1-204ENST00000381535 SND1-IT1Q9HBX3 110 aa9.53□□□□□ -0.88
SYNGR1-204ENST00000381535 VAMP3Q15836 100 aa9.52□□□□□ -0.89
SYNGR1-204ENST00000381535 TSPAN13O95857 204 aa9.51□□□□□ -0.89
SYNGR1-204ENST00000381535 LY6G6CO95867 125 aa9.51□□□□□ -0.89
SYNGR1-204ENST00000381535 SLPIP03973 132 aa9.51□□□□□ -0.89
SYNGR1-204ENST00000381535 RNF151Q2KHN1 245 aa9.51□□□□□ -0.89
SYNGR1-204ENST00000381535 DNAH6Q9C0G6 4158 aa9.5□□□□□ -0.89
SYNGR1-204ENST00000381535 CARD19Q96LW7 228 aa9.5□□□□□ -0.89
SYNGR1-204ENST00000381535 A0A1W2PPM0 123 aa9.49□□□□□ -0.89
SYNGR1-204ENST00000381535 H7C2G1 150 aa9.49□□□□□ -0.89
SYNGR1-204ENST00000381535 FABP2P12104 132 aa9.49□□□□□ -0.89
SYNGR1-204ENST00000381535 WFDC2Q14508 124 aa9.49□□□□□ -0.89
SYNGR1-204ENST00000381535 DNAH10Q8IVF4 4471 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms