RNA–Protein interactions for RNA: ENST00000381089.7

VCX3A-201, Transcript of variable charge X-linked 3A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VCX3A, Length 995 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-201ENST00000381089 IGLV1-50A0A075B6I6 118 aa9.72□□□□□ -0.85
VCX3A-201ENST00000381089 IGLV4-3A0A075B6K6 122 aa9.72□□□□□ -0.85
VCX3A-201ENST00000381089 A0A096LNJ9 63 aa9.72□□□□□ -0.85
VCX3A-201ENST00000381089 H0Y9J4 135 aa9.72□□□□□ -0.85
VCX3A-201ENST00000381089 HSBP1O75506 76 aa9.72□□□□□ -0.85
VCX3A-201ENST00000381089 HBDP02042 147 aa9.72□□□□□ -0.85
VCX3A-201ENST00000381089 G0S2P27469 103 aa9.72□□□□□ -0.85
VCX3A-201ENST00000381089 LINC00310P59036 64 aa9.72□□□□□ -0.85
VCX3A-201ENST00000381089 SCGB3A1Q96QR1 104 aa9.72□□□□□ -0.85
VCX3A-201ENST00000381089 MRPL35Q9NZE8 188 aaKnown RBP9.72□□□□□ -0.85
VCX3A-201ENST00000381089 NDUFA1O15239 70 aa9.71□□□□□ -0.86
VCX3A-201ENST00000381089 ZC2HC1BQ5TFG8 222 aa9.71□□□□□ -0.86
VCX3A-201ENST00000381089 FAM104AQ969W3 186 aa9.71□□□□□ -0.86
VCX3A-201ENST00000381089 PYGO1Q9Y3Y4 419 aa9.71□□□□□ -0.86
VCX3A-201ENST00000381089 IGIPA6NJ69 53 aa9.7□□□□□ -0.86
VCX3A-201ENST00000381089 IFITM10A6NMD0 228 aa9.7□□□□□ -0.86
VCX3A-201ENST00000381089 NUPR1O60356 82 aa9.7□□□□□ -0.86
VCX3A-201ENST00000381089 UBE2D1P51668 147 aa9.7□□□□□ -0.86
VCX3A-201ENST00000381089 MRPS36P82909 103 aaKnown RBP9.7□□□□□ -0.86
VCX3A-201ENST00000381089 Q6ZN92 141 aa9.7□□□□□ -0.86
VCX3A-201ENST00000381089 FAM19A2Q8N3H0 131 aa9.7□□□□□ -0.86
VCX3A-201ENST00000381089 ORAOV1Q8WV07 137 aa9.7□□□□□ -0.86
VCX3A-201ENST00000381089 TMEM141Q96I45 108 aa9.7□□□□□ -0.86
VCX3A-201ENST00000381089 TIMM17AQ99595 171 aa9.69□□□□□ -0.86
VCX3A-201ENST00000381089 A0A0U1RQV1 116 aa9.68□□□□□ -0.86
VCX3A-201ENST00000381089 NDUFA6P56556 154 aa9.68□□□□□ -0.86
VCX3A-201ENST00000381089 TEX43Q6ZNM6 134 aa9.68□□□□□ -0.86
VCX3A-201ENST00000381089 ERASQ7Z444 233 aa9.68□□□□□ -0.86
VCX3A-201ENST00000381089 TLX1NBP0CAT3 122 aa9.67□□□□□ -0.86
VCX3A-201ENST00000381089 RPL13AP40429 203 aaKnown RBP9.67□□□□□ -0.86
VCX3A-201ENST00000381089 PRR4Q16378 134 aa9.67□□□□□ -0.86
VCX3A-201ENST00000381089 PDZD11Q5EBL8 140 aa9.67□□□□□ -0.86
VCX3A-201ENST00000381089 LINC00173Q6ZV60 143 aa9.67□□□□□ -0.86
VCX3A-201ENST00000381089 FAM19A5Q7Z5A7 132 aaPredicted RBP9.67□□□□□ -0.86
VCX3A-201ENST00000381089 VCX2Q9H322 139 aa9.67□□□□□ -0.86
VCX3A-201ENST00000381089 LINC01549A6NIU2 74 aa9.66□□□□□ -0.86
VCX3A-201ENST00000381089 UBE2BP63146 152 aa9.66□□□□□ -0.86
VCX3A-201ENST00000381089 C2orf88Q9BSF0 95 aa9.66□□□□□ -0.86
VCX3A-201ENST00000381089 FAM168BA1KXE4 195 aa9.65□□□□□ -0.86
VCX3A-201ENST00000381089 GAGE2EQ4V326 116 aa9.65□□□□□ -0.86
VCX3A-201ENST00000381089 PAPPA-AS1Q5QFB9 102 aa9.65□□□□□ -0.86
VCX3A-201ENST00000381089 GAGE2DQ9UEU5 116 aa9.65□□□□□ -0.86
VCX3A-201ENST00000381089 IGHV3OR16-9A0A0B4J2B5 98 aa9.64□□□□□ -0.87
VCX3A-201ENST00000381089 ATP5LO75964 103 aa9.64□□□□□ -0.87
VCX3A-201ENST00000381089 NPSP0C0P6 89 aa9.64□□□□□ -0.87
VCX3A-201ENST00000381089 AMELXQ99217 191 aa9.64□□□□□ -0.87
VCX3A-201ENST00000381089 M0QXV9 152 aa9.63□□□□□ -0.87
VCX3A-201ENST00000381089 FABP4P15090 132 aa9.63□□□□□ -0.87
VCX3A-201ENST00000381089 UNQ6190/PRO20217Q6UXQ8 127 aa9.63□□□□□ -0.87
VCX3A-201ENST00000381089 PMVKQ15126 192 aa9.62□□□□□ -0.87
VCX3A-201ENST00000381089 C10orf25Q5T742 122 aa9.62□□□□□ -0.87
VCX3A-201ENST00000381089 CST9LQ9H4G1 147 aa9.62□□□□□ -0.87
VCX3A-201ENST00000381089 C6orf48Q9UBA6 75 aa9.62□□□□□ -0.87
VCX3A-201ENST00000381089 MUC2Q02817 5179 aa9.62□□□□□ -0.87
VCX3A-201ENST00000381089 H0Y8G0 127 aa9.61□□□□□ -0.87
VCX3A-201ENST00000381089 LEPROTL1O95214 131 aa9.61□□□□□ -0.87
VCX3A-201ENST00000381089 KRTAP1-4P0C5Y4 121 aa9.61□□□□□ -0.87
VCX3A-201ENST00000381089 COA6Q5JTJ3 125 aaKnown RBP9.61□□□□□ -0.87
VCX3A-201ENST00000381089 KRTAP11-1Q8IUC1 163 aa9.61□□□□□ -0.87
VCX3A-201ENST00000381089 IFI27L1Q96BM0 104 aa9.61□□□□□ -0.87
VCX3A-201ENST00000381089 TRBV30A0A0K0K1B3 111 aa9.6□□□□□ -0.87
VCX3A-201ENST00000381089 LINC00242Q5T6M2 205 aa9.6□□□□□ -0.87
VCX3A-201ENST00000381089 HSPB8Q9UJY1 196 aa9.6□□□□□ -0.87
VCX3A-201ENST00000381089 PACRGQ96M98 296 aaPredicted RBP9.59□□□□□ -0.87
VCX3A-201ENST00000381089 NDUFC2-KCTD14E9PQ53 114 aa9.58□□□□□ -0.88
VCX3A-201ENST00000381089 GEMIN7Q9H840 131 aaKnown RBP9.58□□□□□ -0.88
VCX3A-201ENST00000381089 S100A6P06703 90 aa9.57□□□□□ -0.88
VCX3A-201ENST00000381089 LINC00469Q8N7U9 141 aa9.56□□□□□ -0.88
VCX3A-201ENST00000381089 CHTOPQ9Y3Y2 248 aaKnown RBP9.56□□□□□ -0.88
VCX3A-201ENST00000381089 ZNF861PO60384 105 aa9.55□□□□□ -0.88
VCX3A-201ENST00000381089 HERVK_113P63121 156 aa9.55□□□□□ -0.88
VCX3A-201ENST00000381089 KIAA0087Q14695 138 aa9.55□□□□□ -0.88
VCX3A-201ENST00000381089 TMA7Q9Y2S6 64 aaKnown RBP9.55□□□□□ -0.88
VCX3A-201ENST00000381089 TINCRA0A1B0GVN0 87 aa9.54□□□□□ -0.88
VCX3A-201ENST00000381089 SEC11AP67812 179 aa9.54□□□□□ -0.88
VCX3A-201ENST00000381089 FAM19A3Q7Z5A8 133 aa9.54□□□□□ -0.88
VCX3A-201ENST00000381089 KRTAP7-1Q8IUC3 87 aa9.54□□□□□ -0.88
VCX3A-201ENST00000381089 HIST3H2BBQ8N257 126 aa9.54□□□□□ -0.88
VCX3A-201ENST00000381089 MAP1LC3CQ9BXW4 147 aa9.54□□□□□ -0.88
VCX3A-201ENST00000381089 CDKN2A-AS1Q9UH64 79 aa9.54□□□□□ -0.88
VCX3A-201ENST00000381089 TRAV12-1A0A0B4J245 112 aa9.53□□□□□ -0.88
VCX3A-201ENST00000381089 IGLC3P0DOY3 106 aa9.53□□□□□ -0.88
VCX3A-201ENST00000381089 S100A2P29034 98 aa9.53□□□□□ -0.88
VCX3A-201ENST00000381089 C9orf129Q5T035 196 aaKnown RBP9.53□□□□□ -0.88
VCX3A-201ENST00000381089 C11orf86A6NJI1 115 aa9.52□□□□□ -0.89
VCX3A-201ENST00000381089 PRSS2P07478 247 aa9.52□□□□□ -0.89
VCX3A-201ENST00000381089 SNRPEP62304 92 aaKnown RBP9.52□□□□□ -0.89
VCX3A-201ENST00000381089 LBHQ53QV2 105 aaPredicted RBP9.52□□□□□ -0.89
VCX3A-201ENST00000381089 C2orf82Q6UX34 121 aa9.52□□□□□ -0.89
VCX3A-201ENST00000381089 LINC01561Q8N1V8 128 aa9.52□□□□□ -0.89
VCX3A-201ENST00000381089 PMCHL2Q9BQD1 86 aa9.52□□□□□ -0.89
VCX3A-201ENST00000381089 F8VRH5 84 aa9.51□□□□□ -0.89
VCX3A-201ENST00000381089 TSPAN13O95857 204 aa9.51□□□□□ -0.89
VCX3A-201ENST00000381089 KRTDAPP60985 99 aa9.51□□□□□ -0.89
VCX3A-201ENST00000381089 CKS1BP61024 79 aa9.51□□□□□ -0.89
VCX3A-201ENST00000381089 SPINK8P0C7L1 97 aa9.5□□□□□ -0.89
VCX3A-201ENST00000381089 ZNF22P17026 224 aaPredicted RBP9.5□□□□□ -0.89
VCX3A-201ENST00000381089 KRTAP9-2Q9BYQ4 174 aa9.5□□□□□ -0.89
VCX3A-201ENST00000381089 IGLV5-45A0A087WSX0 123 aa9.49□□□□□ -0.89
VCX3A-201ENST00000381089 SYS1-DBNDD2H3BUS1 97 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms