RNA–Protein interactions for RNA: ENST00000379361.4

PTCHD1-201, Transcript of patched domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD1, Length 13,714 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1-201ENST00000379361 LINC00574Q9H8X3 128 aa8.26□□□□□ -1.09
PTCHD1-201ENST00000379361 SBSPONQ8IVN8 264 aa8.25□□□□□ -1.09
PTCHD1-201ENST00000379361 TTTY13Q9BZ97 58 aa8.25□□□□□ -1.09
PTCHD1-201ENST00000379361 SMIM26A0A096LP01 95 aa8.25□□□□□ -1.09
PTCHD1-201ENST00000379361 MRGPRG-AS1Q2M3A8 158 aa8.25□□□□□ -1.09
PTCHD1-201ENST00000379361 UTP20O75691 2785 aaKnown RBP8.25□□□□□ -1.09
PTCHD1-201ENST00000379361 LINC01547P58512 204 aaPredicted RBP8.25□□□□□ -1.09
PTCHD1-201ENST00000379361 LINC00526Q96FQ7 95 aa8.24□□□□□ -1.09
PTCHD1-201ENST00000379361 PLA2G2AP14555 144 aa8.24□□□□□ -1.09
PTCHD1-201ENST00000379361 H0Y9P7 68 aa8.24□□□□□ -1.09
PTCHD1-201ENST00000379361 Q8N814 137 aa8.24□□□□□ -1.09
PTCHD1-201ENST00000379361 PCOTHQ58A44 107 aa8.23□□□□□ -1.09
PTCHD1-201ENST00000379361 SMIM11BQ8TCY0 68 aa8.23□□□□□ -1.09
PTCHD1-201ENST00000379361 NUPR1O60356 82 aa8.23□□□□□ -1.09
PTCHD1-201ENST00000379361 C7orf65Q6ZTY9 151 aa8.23□□□□□ -1.09
PTCHD1-201ENST00000379361 EDN2P20800 178 aa8.23□□□□□ -1.09
PTCHD1-201ENST00000379361 IGLV2-8P01709 118 aa8.23□□□□□ -1.09
PTCHD1-201ENST00000379361 COX7CP15954 63 aa8.23□□□□□ -1.09
PTCHD1-201ENST00000379361 NHLRC4P0CG21 123 aaPredicted RBP8.23□□□□□ -1.09
PTCHD1-201ENST00000379361 EBI3Q14213 229 aa8.22□□□□□ -1.09
PTCHD1-201ENST00000379361 ZNF80P51504 273 aaPredicted RBP8.22□□□□□ -1.09
PTCHD1-201ENST00000379361 MSMPQ1L6U9 139 aa8.22□□□□□ -1.09
PTCHD1-201ENST00000379361 EGFEM1PQ0D2K5 195 aa8.22□□□□□ -1.09
PTCHD1-201ENST00000379361 RNASE8Q8TDE3 154 aaKnown RBP8.21□□□□□ -1.09
PTCHD1-201ENST00000379361 TP73-AS1Q9UF72 201 aa8.21□□□□□ -1.09
PTCHD1-201ENST00000379361 LINC00208Q96KT6 92 aa8.21□□□□□ -1.1
PTCHD1-201ENST00000379361 NTM-AS1Q6ZSK4 140 aa8.2□□□□□ -1.1
PTCHD1-201ENST00000379361 ZNF702PQ9H963 129 aa8.2□□□□□ -1.1
PTCHD1-201ENST00000379361 CRYGAP11844 174 aa8.2□□□□□ -1.1
PTCHD1-201ENST00000379361 PRLHP81277 87 aa8.2□□□□□ -1.1
PTCHD1-201ENST00000379361 MBD6Q96DN6 1003 aa8.19□□□□□ -1.1
PTCHD1-201ENST00000379361 SERTAD4-AS1Q5TG53 156 aa8.19□□□□□ -1.1
PTCHD1-201ENST00000379361 TP53AIP1Q9HCN2 124 aa8.19□□□□□ -1.1
PTCHD1-201ENST00000379361 FRMD6-AS1P0C7T7 363 aa8.19□□□□□ -1.1
PTCHD1-201ENST00000379361 HCG22E2RYF7 251 aa8.19□□□□□ -1.1
PTCHD1-201ENST00000379361 PROK1P58294 105 aa8.19□□□□□ -1.1
PTCHD1-201ENST00000379361 Q6Q795 121 aa8.19□□□□□ -1.1
PTCHD1-201ENST00000379361 FAM229AH3BQW9 127 aa8.19□□□□□ -1.1
PTCHD1-201ENST00000379361 POM121L12Q8N7R1 296 aa8.19□□□□□ -1.1
PTCHD1-201ENST00000379361 IGLV2-14P01704 120 aa8.18□□□□□ -1.1
PTCHD1-201ENST00000379361 GDF5OSQ5U4N7 250 aa8.18□□□□□ -1.1
PTCHD1-201ENST00000379361 IGKV2D-30A0A075B6S6 120 aa8.18□□□□□ -1.1
PTCHD1-201ENST00000379361 IGKV2-30P06310 120 aa8.18□□□□□ -1.1
PTCHD1-201ENST00000379361 LINC00575Q6W349 94 aa8.18□□□□□ -1.1
PTCHD1-201ENST00000379361 DNAH12Q6ZR08 3092 aa8.18□□□□□ -1.1
PTCHD1-201ENST00000379361 KLLNB2CW77 178 aa8.18□□□□□ -1.1
PTCHD1-201ENST00000379361 LINC01006Q8NI28 216 aa8.17□□□□□ -1.1
PTCHD1-201ENST00000379361 TSHBP01222 138 aa8.17□□□□□ -1.1
PTCHD1-201ENST00000379361 A0A1B0GU69 56 aa8.17□□□□□ -1.1
PTCHD1-201ENST00000379361 MRPS12O15235 138 aaKnown RBP8.17□□□□□ -1.1
PTCHD1-201ENST00000379361 Q8N2B8 174 aa8.16□□□□□ -1.1
PTCHD1-201ENST00000379361 TRBV7-7A0A0K0K1E9 115 aa8.16□□□□□ -1.1
PTCHD1-201ENST00000379361 C19orf84I3L1E1 186 aa8.16□□□□□ -1.1
PTCHD1-201ENST00000379361 SPAG11AQ6PDA7 123 aa8.16□□□□□ -1.1
PTCHD1-201ENST00000379361 SOSTDC1Q6X4U4 206 aa8.16□□□□□ -1.1
PTCHD1-201ENST00000379361 OXLD1Q5BKU9 147 aa8.16□□□□□ -1.1
PTCHD1-201ENST00000379361 ACYP2P14621 99 aa8.16□□□□□ -1.1
PTCHD1-201ENST00000379361 CDC42SE2Q9NRR3 84 aa8.16□□□□□ -1.1
PTCHD1-201ENST00000379361 VPREB1P12018 145 aa8.15□□□□□ -1.1
PTCHD1-201ENST00000379361 EIF4EBP1Q13541 118 aaPredicted RBP8.15□□□□□ -1.11
PTCHD1-201ENST00000379361 TRBV10-3A0A0K0K1G6 114 aa8.14□□□□□ -1.11
PTCHD1-201ENST00000379361 PLA2G2EQ9NZK7 142 aa8.14□□□□□ -1.11
PTCHD1-201ENST00000379361 YPEL4Q96NS1 127 aa8.13□□□□□ -1.11
PTCHD1-201ENST00000379361 COX6A2Q02221 97 aa8.13□□□□□ -1.11
PTCHD1-201ENST00000379361 ITPR2Q14571 2701 aa8.13□□□□□ -1.11
PTCHD1-201ENST00000379361 RNASE3P12724 160 aaKnown RBP8.13□□□□□ -1.11
PTCHD1-201ENST00000379361 PSPHP1O15172 72 aa8.12□□□□□ -1.11
PTCHD1-201ENST00000379361 CEP350Q5VT06 3117 aa8.12□□□□□ -1.11
PTCHD1-201ENST00000379361 BEAN1Q3B7T3 259 aa8.12□□□□□ -1.11
PTCHD1-201ENST00000379361 C6orf223Q8N319 242 aa8.12□□□□□ -1.11
PTCHD1-201ENST00000379361 UNQ6190/PRO20217Q6UXQ8 127 aa8.11□□□□□ -1.11
PTCHD1-201ENST00000379361 CRIP1P50238 77 aa8.1□□□□□ -1.11
PTCHD1-201ENST00000379361 C10orf99Q6UWK7 81 aa8.1□□□□□ -1.11
PTCHD1-201ENST00000379361 ATP11AUNQ6ZP68 121 aa8.1□□□□□ -1.11
PTCHD1-201ENST00000379361 COX6B2Q6YFQ2 88 aa8.1□□□□□ -1.11
PTCHD1-201ENST00000379361 C9orf116Q5BN46 136 aaPredicted RBP8.09□□□□□ -1.11
PTCHD1-201ENST00000379361 C1orf64Q8NEQ6 169 aa8.09□□□□□ -1.11
PTCHD1-201ENST00000379361 LINC01561Q8N1V8 128 aa8.09□□□□□ -1.11
PTCHD1-201ENST00000379361 ZNF292O60281 2723 aa8.08□□□□□ -1.12
PTCHD1-201ENST00000379361 SPINT4Q6UDR6 99 aa8.08□□□□□ -1.12
PTCHD1-201ENST00000379361 XGP55808 180 aa8.08□□□□□ -1.12
PTCHD1-201ENST00000379361 A0A0C4DFX4 3053 aa8.08□□□□□ -1.12
PTCHD1-201ENST00000379361 A0A1B0GUV1 79 aa8.07□□□□□ -1.12
PTCHD1-201ENST00000379361 Q8N3U1 123 aa8.07□□□□□ -1.12
PTCHD1-201ENST00000379361 A0A087WSZ3 146 aa8.07□□□□□ -1.12
PTCHD1-201ENST00000379361 CCDC179H3BU77 68 aa8.07□□□□□ -1.12
PTCHD1-201ENST00000379361 BRI3O95415 125 aa8.07□□□□□ -1.12
PTCHD1-201ENST00000379361 MOBPQ13875 183 aa8.07□□□□□ -1.12
PTCHD1-201ENST00000379361 C11orf71Q6IPW1 123 aa8.07□□□□□ -1.12
PTCHD1-201ENST00000379361 Q6ZTC4 211 aa8.06□□□□□ -1.12
PTCHD1-201ENST00000379361 C6orf48Q9UBA6 75 aa8.06□□□□□ -1.12
PTCHD1-201ENST00000379361 MAPKAPK5-AS1Q8N8E1 139 aa8.06□□□□□ -1.12
PTCHD1-201ENST00000379361 A8MZ25 164 aa8.06□□□□□ -1.12
PTCHD1-201ENST00000379361 IGLV1-40P01703 118 aa8.06□□□□□ -1.12
PTCHD1-201ENST00000379361 CXCL6P80162 114 aa8.06□□□□□ -1.12
PTCHD1-201ENST00000379361 J3QL48 77 aa8.06□□□□□ -1.12
PTCHD1-201ENST00000379361 C18orf65Q6ZTR6 163 aa8.05□□□□□ -1.12
PTCHD1-201ENST00000379361 KMT2BQ9UMN6 2715 aaPredicted RBP8.05□□□□□ -1.12
PTCHD1-201ENST00000379361 GCN1Q92616 2671 aaKnown RBP8.05□□□□□ -1.12
PTCHD1-201ENST00000379361 LINC00694P0DN24 101 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms