RNA–Protein interactions for RNA: ENST00000379018.7

PDLIM4-202, Transcript of PDZ and LIM domain 4, humanhuman

TSL 1 (best) BASIC

Gene PDLIM4, Length 1,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-202ENST00000379018 KRTAP7-1Q8IUC3 87 aa10.61□□□□□ -0.71
PDLIM4-202ENST00000379018 PPP1R17O96001 155 aa10.6□□□□□ -0.71
PDLIM4-202ENST00000379018 TLX1NBP0CAT3 122 aa10.6□□□□□ -0.71
PDLIM4-202ENST00000379018 FABP4P15090 132 aa10.6□□□□□ -0.71
PDLIM4-202ENST00000379018 RIGQ13278 110 aa10.6□□□□□ -0.71
PDLIM4-202ENST00000379018 TIMM21Q9BVV7 248 aa10.6□□□□□ -0.71
PDLIM4-202ENST00000379018 IGHV3OR16-9A0A0B4J2B5 98 aa10.59□□□□□ -0.71
PDLIM4-202ENST00000379018 F8WDY8 70 aa10.59□□□□□ -0.71
PDLIM4-202ENST00000379018 LINC00310P59036 64 aa10.58□□□□□ -0.72
PDLIM4-202ENST00000379018 MRPL51Q4U2R6 128 aaKnown RBP10.57□□□□□ -0.72
PDLIM4-202ENST00000379018 C2orf82Q6UX34 121 aa10.57□□□□□ -0.72
PDLIM4-202ENST00000379018 MRPL54Q6P161 138 aaKnown RBP10.56□□□□□ -0.72
PDLIM4-202ENST00000379018 FAM104AQ969W3 186 aa10.56□□□□□ -0.72
PDLIM4-202ENST00000379018 C9orf129Q5T035 196 aaKnown RBP10.55□□□□□ -0.72
PDLIM4-202ENST00000379018 C18orf32Q8TCD1 76 aa10.54□□□□□ -0.72
PDLIM4-202ENST00000379018 ALKBH7Q9BT30 221 aaPredicted RBP10.54□□□□□ -0.72
PDLIM4-202ENST00000379018 SPANXA1Q9NS26 97 aa10.54□□□□□ -0.72
PDLIM4-202ENST00000379018 KRTAP9-6A0A140TA67 174 aa10.53□□□□□ -0.72
PDLIM4-202ENST00000379018 TCAPO15273 167 aa10.53□□□□□ -0.72
PDLIM4-202ENST00000379018 ZNF861PO60384 105 aa10.53□□□□□ -0.72
PDLIM4-202ENST00000379018 SERF1AO75920 110 aa10.53□□□□□ -0.72
PDLIM4-202ENST00000379018 CKS2P33552 79 aa10.53□□□□□ -0.72
PDLIM4-202ENST00000379018 PDZD11Q5EBL8 140 aa10.53□□□□□ -0.72
PDLIM4-202ENST00000379018 FAM104BQ5XKR9 115 aa10.53□□□□□ -0.72
PDLIM4-202ENST00000379018 NDUFC2-KCTD14E9PQ53 114 aa10.52□□□□□ -0.73
PDLIM4-202ENST00000379018 KIAA0087Q14695 138 aa10.52□□□□□ -0.73
PDLIM4-202ENST00000379018 BAGE3Q86Y29 109 aa10.52□□□□□ -0.73
PDLIM4-202ENST00000379018 LINC00469Q8N7U9 141 aa10.52□□□□□ -0.73
PDLIM4-202ENST00000379018 C20orf78Q9BR46 151 aa10.52□□□□□ -0.73
PDLIM4-202ENST00000379018 SMIM2Q9BVW6 85 aa10.52□□□□□ -0.73
PDLIM4-202ENST00000379018 TRBV30A0A0K0K1B3 111 aa10.51□□□□□ -0.73
PDLIM4-202ENST00000379018 TNFRSF6BO95407 300 aa10.51□□□□□ -0.73
PDLIM4-202ENST00000379018 MRPS36P82909 103 aaKnown RBP10.51□□□□□ -0.73
PDLIM4-202ENST00000379018 LCE2AQ5TA79 106 aaPredicted RBP10.51□□□□□ -0.73
PDLIM4-202ENST00000379018 CHCHD1Q96BP2 118 aaKnown RBP10.51□□□□□ -0.73
PDLIM4-202ENST00000379018 FAT4Q6V0I7 4981 aa10.5□□□□□ -0.73
PDLIM4-202ENST00000379018 A0A087X002 238 aa10.49□□□□□ -0.73
PDLIM4-202ENST00000379018 D6R8Y8 96 aa10.49□□□□□ -0.73
PDLIM4-202ENST00000379018 NUPR1O60356 82 aa10.49□□□□□ -0.73
PDLIM4-202ENST00000379018 TYMSOSQ8TAI1 123 aa10.49□□□□□ -0.73
PDLIM4-202ENST00000379018 RETNLBQ9BQ08 111 aa10.49□□□□□ -0.73
PDLIM4-202ENST00000379018 NPYP01303 97 aa10.48□□□□□ -0.73
PDLIM4-202ENST00000379018 IFI27P40305 119 aaPredicted RBP10.48□□□□□ -0.73
PDLIM4-202ENST00000379018 LINC00242Q5T6M2 205 aa10.48□□□□□ -0.73
PDLIM4-202ENST00000379018 TOMM7Q9P0U1 55 aa10.48□□□□□ -0.73
PDLIM4-202ENST00000379018 C22orf24Q9Y442 160 aa10.48□□□□□ -0.73
PDLIM4-202ENST00000379018 RPL32P62910 135 aaKnown RBP10.47□□□□□ -0.73
PDLIM4-202ENST00000379018 XAGE1AQ9HD64 81 aa10.47□□□□□ -0.73
PDLIM4-202ENST00000379018 TSTD3H0UI37 97 aa10.46□□□□□ -0.73
PDLIM4-202ENST00000379018 PRSS2P07478 247 aa10.46□□□□□ -0.73
PDLIM4-202ENST00000379018 TEX43Q6ZNM6 134 aa10.46□□□□□ -0.73
PDLIM4-202ENST00000379018 LAMTOR2Q9Y2Q5 125 aa10.46□□□□□ -0.73
PDLIM4-202ENST00000379018 CRYGAP11844 174 aa10.45□□□□□ -0.74
PDLIM4-202ENST00000379018 KIAA1644Q3SXP7 199 aa10.45□□□□□ -0.74
PDLIM4-202ENST00000379018 ANAPC11Q9NYG5 84 aa10.45□□□□□ -0.74
PDLIM4-202ENST00000379018 IGLV4-3A0A075B6K6 122 aa10.44□□□□□ -0.74
PDLIM4-202ENST00000379018 CKS1BP61024 79 aa10.44□□□□□ -0.74
PDLIM4-202ENST00000379018 ZC2HC1BQ5TFG8 222 aa10.44□□□□□ -0.74
PDLIM4-202ENST00000379018 HSBP1O75506 76 aa10.43□□□□□ -0.74
PDLIM4-202ENST00000379018 PPBPP02775 128 aa10.43□□□□□ -0.74
PDLIM4-202ENST00000379018 RPL28P46779 137 aaKnown RBP10.43□□□□□ -0.74
PDLIM4-202ENST00000379018 CTAG1AP78358 180 aa10.43□□□□□ -0.74
PDLIM4-202ENST00000379018 LBHQ53QV2 105 aaPredicted RBP10.43□□□□□ -0.74
PDLIM4-202ENST00000379018 TMEM141Q96I45 108 aa10.43□□□□□ -0.74
PDLIM4-202ENST00000379018 PCP4L1A6NKN8 68 aa10.42□□□□□ -0.74
PDLIM4-202ENST00000379018 URB1-AS1Q96HZ7 61 aa10.42□□□□□ -0.74
PDLIM4-202ENST00000379018 CDIP1Q9H305 208 aa10.41□□□□□ -0.74
PDLIM4-202ENST00000379018 LINC01546A6NGU7 62 aa10.4□□□□□ -0.74
PDLIM4-202ENST00000379018 BCE1O60756 84 aa10.4□□□□□ -0.74
PDLIM4-202ENST00000379018 LINC00614P0C842 121 aa10.4□□□□□ -0.74
PDLIM4-202ENST00000379018 C6orf226Q5I0X4 101 aa10.4□□□□□ -0.74
PDLIM4-202ENST00000379018 MRPL55Q7Z7F7 128 aaKnown RBP10.4□□□□□ -0.74
PDLIM4-202ENST00000379018 ORMDL3Q8N138 153 aa10.4□□□□□ -0.74
PDLIM4-202ENST00000379018 C2orf88Q9BSF0 95 aa10.4□□□□□ -0.74
PDLIM4-202ENST00000379018 RPL37AP8A6NKH3 93 aa10.39□□□□□ -0.75
PDLIM4-202ENST00000379018 PRSS47A8MTI9 375 aa10.39□□□□□ -0.75
PDLIM4-202ENST00000379018 LINC00587B1AMM8 73 aa10.39□□□□□ -0.75
PDLIM4-202ENST00000379018 PMCHL1Q16048 86 aa10.39□□□□□ -0.75
PDLIM4-202ENST00000379018 PYGO1Q9Y3Y4 419 aa10.39□□□□□ -0.75
PDLIM4-202ENST00000379018 LOC389332A0A1B0GUA5 103 aa10.38□□□□□ -0.75
PDLIM4-202ENST00000379018 GAGE10A6NGK3 116 aa10.38□□□□□ -0.75
PDLIM4-202ENST00000379018 SCGB1D1O95968 90 aa10.38□□□□□ -0.75
PDLIM4-202ENST00000379018 DDTP30046 118 aa10.38□□□□□ -0.75
PDLIM4-202ENST00000379018 Q6ZN92 141 aa10.38□□□□□ -0.75
PDLIM4-202ENST00000379018 C20orf202A1L168 122 aa10.37□□□□□ -0.75
PDLIM4-202ENST00000379018 PRELID3AQ96N28 172 aa10.37□□□□□ -0.75
PDLIM4-202ENST00000379018 C3orf79P0CE67 100 aa10.36□□□□□ -0.75
PDLIM4-202ENST00000379018 KRTAP13-2Q52LG2 175 aa10.36□□□□□ -0.75
PDLIM4-202ENST00000379018 LINC01561Q8N1V8 128 aa10.36□□□□□ -0.75
PDLIM4-202ENST00000379018 LINC00304Q8N9R0 145 aa10.36□□□□□ -0.75
PDLIM4-202ENST00000379018 UBE2AP49459 152 aa10.35□□□□□ -0.75
PDLIM4-202ENST00000379018 LINC00173Q6ZV60 143 aa10.35□□□□□ -0.75
PDLIM4-202ENST00000379018 Q8IZM0 81 aa10.35□□□□□ -0.75
PDLIM4-202ENST00000379018 LINC00167Q96N53 147 aa10.35□□□□□ -0.75
PDLIM4-202ENST00000379018 VCX2Q9H322 139 aa10.34□□□□□ -0.75
PDLIM4-202ENST00000379018 TP73-AS1Q9UF72 201 aa10.34□□□□□ -0.75
PDLIM4-202ENST00000379018 HSPB8Q9UJY1 196 aa10.34□□□□□ -0.75
PDLIM4-202ENST00000379018 IGLV7-46A0A075B6I9 117 aa10.33□□□□□ -0.76
PDLIM4-202ENST00000379018 LEPROTL1O95214 131 aa10.33□□□□□ -0.76
PDLIM4-202ENST00000379018 PET117Q6UWS5 81 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms