RNA–Protein interactions for RNA: ENST00000378778.5

PTPRR-203, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 1 (best) BASIC

Gene PTPRR, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-203ENST00000378778 DCHS2Q6V1P9 2916 aa5.73□□□□□ -1.49
PTPRR-203ENST00000378778 COL6A6A6NMZ7 2263 aa5.73□□□□□ -1.49
PTPRR-203ENST00000378778 IGHV4-28A0A0C4DH34 117 aa5.73□□□□□ -1.49
PTPRR-203ENST00000378778 PRB1P04280 392 aa5.73□□□□□ -1.49
PTPRR-203ENST00000378778 XCL1P47992 114 aa5.72□□□□□ -1.49
PTPRR-203ENST00000378778 FHL2Q14192 279 aa5.72□□□□□ -1.49
PTPRR-203ENST00000378778 C6orf223Q8N319 242 aa5.72□□□□□ -1.49
PTPRR-203ENST00000378778 DSCR8Q96T75 97 aa5.72□□□□□ -1.49
PTPRR-203ENST00000378778 MGAQ8IWI9 3026 aa5.72□□□□□ -1.49
PTPRR-203ENST00000378778 A0A096LNT2 108 aa5.72□□□□□ -1.49
PTPRR-203ENST00000378778 C9orf66Q5T8R8 295 aa5.72□□□□□ -1.49
PTPRR-203ENST00000378778 LINC00482Q8N8I6 264 aa5.72□□□□□ -1.49
PTPRR-203ENST00000378778 TEP1Q99973 2627 aaKnown RBP5.72□□□□□ -1.49
PTPRR-203ENST00000378778 LRBAP50851 2863 aa5.71□□□□□ -1.49
PTPRR-203ENST00000378778 TRGV2A0A075B6R0 118 aa5.71□□□□□ -1.5
PTPRR-203ENST00000378778 TRGV4A0A0C4DH28 118 aa5.71□□□□□ -1.5
PTPRR-203ENST00000378778 RBM3P98179 157 aaKnown RBP5.71□□□□□ -1.5
PTPRR-203ENST00000378778 Q6ZQT0 140 aa5.71□□□□□ -1.5
PTPRR-203ENST00000378778 CFAP46Q8IYW2 2715 aa5.71□□□□□ -1.5
PTPRR-203ENST00000378778 ERC2-IT1O76042 136 aa5.71□□□□□ -1.5
PTPRR-203ENST00000378778 PFN2P35080 140 aa5.71□□□□□ -1.5
PTPRR-203ENST00000378778 NOP10Q9NPE3 64 aaKnown RBP5.71□□□□□ -1.5
PTPRR-203ENST00000378778 BOD1L1Q8NFC6 3051 aa5.7□□□□□ -1.5
PTPRR-203ENST00000378778 PTPN13Q12923 2485 aa5.7□□□□□ -1.5
PTPRR-203ENST00000378778 H3BS24 57 aa5.7□□□□□ -1.5
PTPRR-203ENST00000378778 OXTP01178 125 aa5.7□□□□□ -1.5
PTPRR-203ENST00000378778 NANOS2P60321 138 aaKnown RBP5.7□□□□□ -1.5
PTPRR-203ENST00000378778 IGLV4-60A0A075B6I1 120 aa5.7□□□□□ -1.5
PTPRR-203ENST00000378778 SMIM26A0A096LP01 95 aa5.7□□□□□ -1.5
PTPRR-203ENST00000378778 PLAC8L1A1L4L8 177 aa5.7□□□□□ -1.5
PTPRR-203ENST00000378778 ENHOQ6UWT2 76 aa5.7□□□□□ -1.5
PTPRR-203ENST00000378778 LINC00575Q6W349 94 aa5.7□□□□□ -1.5
PTPRR-203ENST00000378778 PLA2G2DQ9UNK4 145 aa5.7□□□□□ -1.5
PTPRR-203ENST00000378778 SLPIP03973 132 aa5.69□□□□□ -1.5
PTPRR-203ENST00000378778 TRAV23DV6A0A075B6W5 121 aa5.69□□□□□ -1.5
PTPRR-203ENST00000378778 DEFB136Q30KP8 78 aa5.69□□□□□ -1.5
PTPRR-203ENST00000378778 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.68□□□□□ -1.5
PTPRR-203ENST00000378778 FAM229AH3BQW9 127 aa5.68□□□□□ -1.5
PTPRR-203ENST00000378778 H7BZZ5 65 aa5.68□□□□□ -1.5
PTPRR-203ENST00000378778 GNLYP22749 145 aa5.68□□□□□ -1.5
PTPRR-203ENST00000378778 C20orf197Q8N268 126 aa5.68□□□□□ -1.5
PTPRR-203ENST00000378778 PRO0628Q9UI54 55 aa5.68□□□□□ -1.5
PTPRR-203ENST00000378778 TEX15Q9BXT5 2789 aa5.68□□□□□ -1.5
PTPRR-203ENST00000378778 CD164L2Q6UWJ8 174 aa5.68□□□□□ -1.5
PTPRR-203ENST00000378778 LINC00612Q8N6U2 182 aa5.68□□□□□ -1.5
PTPRR-203ENST00000378778 TRBV7-6A0A0J9YX20 115 aa5.67□□□□□ -1.5
PTPRR-203ENST00000378778 LOC100131303A0A0U1RQF7 123 aa5.67□□□□□ -1.5
PTPRR-203ENST00000378778 PLA2G2AP14555 144 aa5.67□□□□□ -1.5
PTPRR-203ENST00000378778 HILS1P60008 231 aa5.67□□□□□ -1.5
PTPRR-203ENST00000378778 C4orf26Q17RF5 130 aa5.67□□□□□ -1.5
PTPRR-203ENST00000378778 C18orf65Q6ZTR6 163 aa5.67□□□□□ -1.5
PTPRR-203ENST00000378778 FAM19A1Q7Z5A9 133 aa5.67□□□□□ -1.5
PTPRR-203ENST00000378778 CCL24O00175 119 aa5.67□□□□□ -1.5
PTPRR-203ENST00000378778 LINC01547P58512 204 aaPredicted RBP5.66□□□□□ -1.5
PTPRR-203ENST00000378778 KIAA0087Q14695 138 aa5.66□□□□□ -1.5
PTPRR-203ENST00000378778 HRCT1Q6UXD1 115 aa5.66□□□□□ -1.5
PTPRR-203ENST00000378778 CSNK1G2-AS1Q8NCQ2 148 aa5.66□□□□□ -1.5
PTPRR-203ENST00000378778 GIG44P09565 113 aaPredicted RBP5.65□□□□□ -1.5
PTPRR-203ENST00000378778 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.65□□□□□ -1.5
PTPRR-203ENST00000378778 Q6ZVQ6 151 aa5.65□□□□□ -1.5
PTPRR-203ENST00000378778 HIVEP3Q5T1R4 2406 aa5.65□□□□□ -1.5
PTPRR-203ENST00000378778 IGHV4-31P0DP07 118 aa5.65□□□□□ -1.51
PTPRR-203ENST00000378778 SORL1Q92673 2214 aa5.65□□□□□ -1.51
PTPRR-203ENST00000378778 SPTAN1Q13813 2472 aaKnown RBP5.64□□□□□ -1.51
PTPRR-203ENST00000378778 IGKV3OR2-268A0A0C4DH90 116 aa5.64□□□□□ -1.51
PTPRR-203ENST00000378778 C6orf99Q4VX62 202 aa5.64□□□□□ -1.51
PTPRR-203ENST00000378778 IGLV6-57P01721 117 aa5.64□□□□□ -1.51
PTPRR-203ENST00000378778 LAMTOR3Q9UHA4 124 aa5.64□□□□□ -1.51
PTPRR-203ENST00000378778 ABCA12Q86UK0 2595 aa5.64□□□□□ -1.51
PTPRR-203ENST00000378778 NOTCH2Q04721 2471 aa5.63□□□□□ -1.51
PTPRR-203ENST00000378778 GVQW2A0A096LPI5 108 aaPredicted RBP5.63□□□□□ -1.51
PTPRR-203ENST00000378778 A0A0J9YWU9 116 aa5.63□□□□□ -1.51
PTPRR-203ENST00000378778 IGHV4-30-4P0DP06 118 aa5.63□□□□□ -1.51
PTPRR-203ENST00000378778 MYO9AB2RTY4 2548 aa5.63□□□□□ -1.51
PTPRR-203ENST00000378778 ANKRD17O75179 2603 aaKnown RBP5.63□□□□□ -1.51
PTPRR-203ENST00000378778 ATMQ13315 3056 aa5.62□□□□□ -1.51
PTPRR-203ENST00000378778 TRBV7-4A0A0J9YYF1 115 aa5.62□□□□□ -1.51
PTPRR-203ENST00000378778 A0A1B0GW54 56 aa5.62□□□□□ -1.51
PTPRR-203ENST00000378778 PRO0255Q9UI72 69 aa5.62□□□□□ -1.51
PTPRR-203ENST00000378778 IGLV1-51P01701 117 aa5.62□□□□□ -1.51
PTPRR-203ENST00000378778 ZNF843Q8N446 348 aa5.62□□□□□ -1.51
PTPRR-203ENST00000378778 DOPEY1Q5JWR5 2465 aa5.62□□□□□ -1.51
PTPRR-203ENST00000378778 J3QKU1 62 aa5.61□□□□□ -1.51
PTPRR-203ENST00000378778 UBR5O95071 2799 aaPredicted RBP5.61□□□□□ -1.51
PTPRR-203ENST00000378778 C19orf73Q9NVV2 129 aa5.61□□□□□ -1.51
PTPRR-203ENST00000378778 RELNP78509 3460 aa5.61□□□□□ -1.51
PTPRR-203ENST00000378778 GYPEP15421 78 aa5.61□□□□□ -1.51
PTPRR-203ENST00000378778 WFDC9Q8NEX5 89 aa5.61□□□□□ -1.51
PTPRR-203ENST00000378778 HAMPP81172 84 aa5.61□□□□□ -1.51
PTPRR-203ENST00000378778 LYRM9A8MSI8 78 aa5.6□□□□□ -1.51
PTPRR-203ENST00000378778 MIFP14174 115 aa5.6□□□□□ -1.51
PTPRR-203ENST00000378778 CHCHD10Q8WYQ3 142 aaPredicted RBP5.6□□□□□ -1.51
PTPRR-203ENST00000378778 DIRC1Q969H9 104 aa5.6□□□□□ -1.51
PTPRR-203ENST00000378778 NBPF19A0A087WUL8 3843 aa5.6□□□□□ -1.51
PTPRR-203ENST00000378778 C16orf95Q9H693 158 aa5.6□□□□□ -1.51
PTPRR-203ENST00000378778 F8WEM9 126 aa5.59□□□□□ -1.51
PTPRR-203ENST00000378778 COX7BP24311 80 aa5.59□□□□□ -1.51
PTPRR-203ENST00000378778 Q8N3U1 123 aa5.59□□□□□ -1.51
PTPRR-203ENST00000378778 C11orf68Q9H3H3 251 aaKnown RBP5.59□□□□□ -1.51
PTPRR-203ENST00000378778 SPATA3Q8NHX4 192 aa5.59□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 115.6 ms