RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 CIRBPQ14011 172 aaKnown RBP8.48□□□□□ -1.05
CKAP2-202ENST00000378034 SMIM1B2RUZ4 78 aa8.48□□□□□ -1.05
CKAP2-202ENST00000378034 C6orf226Q5I0X4 101 aa8.48□□□□□ -1.05
CKAP2-202ENST00000378034 LOC107984640A0A0U1RRK4 108 aa8.47□□□□□ -1.05
CKAP2-202ENST00000378034 LINC00474Q9P2X8 69 aa8.47□□□□□ -1.05
CKAP2-202ENST00000378034 TRBV30A0A0K0K1B3 111 aa8.46□□□□□ -1.05
CKAP2-202ENST00000378034 F8VRH5 84 aa8.46□□□□□ -1.05
CKAP2-202ENST00000378034 ZNF22P17026 224 aaPredicted RBP8.46□□□□□ -1.05
CKAP2-202ENST00000378034 CXCL5P42830 114 aa8.46□□□□□ -1.05
CKAP2-202ENST00000378034 CKS1BP61024 79 aa8.46□□□□□ -1.05
CKAP2-202ENST00000378034 SCXQ7RTU7 201 aa8.46□□□□□ -1.05
CKAP2-202ENST00000378034 TOMM7Q9P0U1 55 aa8.46□□□□□ -1.05
CKAP2-202ENST00000378034 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.46□□□□□ -1.05
CKAP2-202ENST00000378034 APOBP04114 4563 aaKnown RBP8.46□□□□□ -1.05
CKAP2-202ENST00000378034 C11orf86A6NJI1 115 aa8.46□□□□□ -1.06
CKAP2-202ENST00000378034 UNQ6190/PRO20217Q6UXQ8 127 aa8.46□□□□□ -1.06
CKAP2-202ENST00000378034 Q8N1X5 172 aa8.46□□□□□ -1.06
CKAP2-202ENST00000378034 CIRBP-AS1Q8TBR5 109 aa8.46□□□□□ -1.06
CKAP2-202ENST00000378034 SPACA4Q8TDM5 124 aa8.46□□□□□ -1.06
CKAP2-202ENST00000378034 KRTAP3-3Q9BYR6 98 aa8.46□□□□□ -1.06
CKAP2-202ENST00000378034 KRTAP3-2Q9BYR7 98 aa8.46□□□□□ -1.06
CKAP2-202ENST00000378034 RYR1P21817 5038 aa8.46□□□□□ -1.06
CKAP2-202ENST00000378034 SPINK8P0C7L1 97 aa8.45□□□□□ -1.06
CKAP2-202ENST00000378034 COX7B2Q8TF08 81 aa8.45□□□□□ -1.06
CKAP2-202ENST00000378034 C10orf25Q5T742 122 aa8.44□□□□□ -1.06
CKAP2-202ENST00000378034 C6orf48Q9UBA6 75 aa8.44□□□□□ -1.06
CKAP2-202ENST00000378034 DNAH8Q96JB1 4490 aa8.44□□□□□ -1.06
CKAP2-202ENST00000378034 A0A096LNI7 61 aa8.44□□□□□ -1.06
CKAP2-202ENST00000378034 IGLV5-39A0A0G2JS06 123 aa8.44□□□□□ -1.06
CKAP2-202ENST00000378034 PANO1I0J062 215 aa8.44□□□□□ -1.06
CKAP2-202ENST00000378034 TLX1NBP0CAT3 122 aa8.44□□□□□ -1.06
CKAP2-202ENST00000378034 HAMPP81172 84 aa8.44□□□□□ -1.06
CKAP2-202ENST00000378034 ODF1Q14990 250 aa8.44□□□□□ -1.06
CKAP2-202ENST00000378034 TMEM170BQ5T4T1 132 aa8.44□□□□□ -1.06
CKAP2-202ENST00000378034 C2orf82Q6UX34 121 aa8.44□□□□□ -1.06
CKAP2-202ENST00000378034 DPH3Q96FX2 82 aa8.44□□□□□ -1.06
CKAP2-202ENST00000378034 MAP1LC3CQ9BXW4 147 aa8.44□□□□□ -1.06
CKAP2-202ENST00000378034 CHTF8P0CG12 524 aa8.43□□□□□ -1.06
CKAP2-202ENST00000378034 PTTG1IPP53801 180 aa8.43□□□□□ -1.06
CKAP2-202ENST00000378034 HERC2O95714 4834 aa8.43□□□□□ -1.06
CKAP2-202ENST00000378034 IGKV2-24A0A0C4DH68 120 aa8.42□□□□□ -1.06
CKAP2-202ENST00000378034 TSTD3H0UI37 97 aa8.42□□□□□ -1.06
CKAP2-202ENST00000378034 H0Y8G0 127 aa8.42□□□□□ -1.06
CKAP2-202ENST00000378034 MAJINQ3KP22 176 aa8.42□□□□□ -1.06
CKAP2-202ENST00000378034 A0A087WYN8 130 aa8.41□□□□□ -1.06
CKAP2-202ENST00000378034 PLNP26678 52 aa8.41□□□□□ -1.06
CKAP2-202ENST00000378034 GAGE2BQ13066 116 aa8.41□□□□□ -1.06
CKAP2-202ENST00000378034 PLAC8Q9NZF1 115 aa8.41□□□□□ -1.06
CKAP2-202ENST00000378034 HSPG2P98160 4391 aa8.41□□□□□ -1.06
CKAP2-202ENST00000378034 FAM229AH3BQW9 127 aa8.41□□□□□ -1.06
CKAP2-202ENST00000378034 SMR3BP02814 79 aaPredicted RBP8.41□□□□□ -1.06
CKAP2-202ENST00000378034 RPL18AQ02543 176 aaKnown RBP8.41□□□□□ -1.06
CKAP2-202ENST00000378034 TMEM223A0PJW6 202 aa8.4□□□□□ -1.06
CKAP2-202ENST00000378034 NDUFC2-KCTD14E9PQ53 114 aa8.4□□□□□ -1.06
CKAP2-202ENST00000378034 SFTA2Q6UW10 78 aa8.4□□□□□ -1.06
CKAP2-202ENST00000378034 DDTP30046 118 aa8.39□□□□□ -1.07
CKAP2-202ENST00000378034 STPG4Q8N801 248 aa8.39□□□□□ -1.07
CKAP2-202ENST00000378034 EPM2AB3EWF7 344 aa8.39□□□□□ -1.07
CKAP2-202ENST00000378034 SYS1-DBNDD2H3BUS1 97 aa8.39□□□□□ -1.07
CKAP2-202ENST00000378034 DPM2O94777 84 aa8.39□□□□□ -1.07
CKAP2-202ENST00000378034 KRTAP17-1Q9BYP8 105 aa8.39□□□□□ -1.07
CKAP2-202ENST00000378034 Q6ZRP5 223 aa8.38□□□□□ -1.07
CKAP2-202ENST00000378034 LINC00528Q8N1L1 170 aa8.38□□□□□ -1.07
CKAP2-202ENST00000378034 PRO1933Q9H354 126 aa8.38□□□□□ -1.07
CKAP2-202ENST00000378034 C9orf116Q5BN46 136 aaPredicted RBP8.37□□□□□ -1.07
CKAP2-202ENST00000378034 Q5VSD8 79 aa8.37□□□□□ -1.07
CKAP2-202ENST00000378034 PET117Q6UWS5 81 aa8.37□□□□□ -1.07
CKAP2-202ENST00000378034 IGKCP01834 107 aa8.37□□□□□ -1.07
CKAP2-202ENST00000378034 SCGB1D1O95968 90 aa8.36□□□□□ -1.07
CKAP2-202ENST00000378034 PLA2G1BP04054 148 aaKnown RBP8.36□□□□□ -1.07
CKAP2-202ENST00000378034 C14orf144Q96I85 54 aa8.36□□□□□ -1.07
CKAP2-202ENST00000378034 GAGE2EQ4V326 116 aa8.35□□□□□ -1.07
CKAP2-202ENST00000378034 GAGE2DQ9UEU5 116 aa8.35□□□□□ -1.07
CKAP2-202ENST00000378034 HERVK_113P61574 105 aa8.35□□□□□ -1.07
CKAP2-202ENST00000378034 LINC01545Q5VT33 79 aa8.35□□□□□ -1.07
CKAP2-202ENST00000378034 PMCHL2Q9BQD1 86 aa8.35□□□□□ -1.07
CKAP2-202ENST00000378034 C3orf79P0CE67 100 aa8.34□□□□□ -1.07
CKAP2-202ENST00000378034 COX17Q14061 63 aa8.33□□□□□ -1.08
CKAP2-202ENST00000378034 C7orf33Q8WU49 177 aa8.33□□□□□ -1.08
CKAP2-202ENST00000378034 ZNF625Q96I27 306 aaPredicted RBP8.33□□□□□ -1.08
CKAP2-202ENST00000378034 A0A1W2PNN7 141 aa8.33□□□□□ -1.08
CKAP2-202ENST00000378034 PLEKHB2Q96CS7 222 aa8.33□□□□□ -1.08
CKAP2-202ENST00000378034 KRTAP4-5Q9BYR2 181 aa8.33□□□□□ -1.08
CKAP2-202ENST00000378034 LEPROTO15243 131 aa8.32□□□□□ -1.08
CKAP2-202ENST00000378034 KRTDAPP60985 99 aa8.32□□□□□ -1.08
CKAP2-202ENST00000378034 ERG28Q9UKR5 140 aa8.31□□□□□ -1.08
CKAP2-202ENST00000378034 C20orf202A1L168 122 aa8.31□□□□□ -1.08
CKAP2-202ENST00000378034 HERV-K104P63124 156 aa8.31□□□□□ -1.08
CKAP2-202ENST00000378034 LBHQ53QV2 105 aaPredicted RBP8.31□□□□□ -1.08
CKAP2-202ENST00000378034 C9orf129Q5T035 196 aaKnown RBP8.31□□□□□ -1.08
CKAP2-202ENST00000378034 RPL37AP61513 92 aaKnown RBP8.3□□□□□ -1.08
CKAP2-202ENST00000378034 MYMXA0A1B0GTQ4 84 aa8.3□□□□□ -1.08
CKAP2-202ENST00000378034 NDUFA12Q9UI09 145 aa8.3□□□□□ -1.08
CKAP2-202ENST00000378034 J3QQQ9 107 aa8.29□□□□□ -1.08
CKAP2-202ENST00000378034 PFN2P35080 140 aa8.29□□□□□ -1.08
CKAP2-202ENST00000378034 NMUP48645 174 aa8.29□□□□□ -1.08
CKAP2-202ENST00000378034 XAGE1AQ9HD64 81 aa8.29□□□□□ -1.08
CKAP2-202ENST00000378034 FAM168BA1KXE4 195 aa8.28□□□□□ -1.08
CKAP2-202ENST00000378034 E9PLD3 99 aa8.28□□□□□ -1.08
CKAP2-202ENST00000378034 KRTAP10-4P60372 401 aaPredicted RBP8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms